10 20 30 40 50 60 70 80 3GJ6 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSPORT PROTEIN 07-MAR-09 3GJ6
TITLE CRYSTAL STRUCTURE OF HUMAN RANGDP-NUP153ZNF1 COMPLEX
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP-BINDING NUCLEAR PROTEIN RAN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GTPASE RAN, RAS-RELATED NUCLEAR PROTEIN, RAS-LIKE COMPND 5 PROTEIN TC4, ANDROGEN RECEPTOR-ASSOCIATED PROTEIN 24; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: NUCLEAR PORE COMPLEX PROTEIN NUP153; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: NUP153 - ZINC FINGER MODULE 1: UNP RESIDUES 658- COMPND 12 686; COMPND 13 SYNONYM: NUCLEOPORIN NUP153, 153 KDA NUCLEOPORIN; COMPND 14 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAN, ARA24, OK/SW-CL.81; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: BL21(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 13 ORGANISM_COMMON: RAT; SOURCE 14 ORGANISM_TAXID: 10116; SOURCE 15 GENE: NUP153; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_VARIANT: BL21(DE3)-RIL; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1
KEYWDS G PROTEIN, GDP, RAN, NUCLEAR PORE, NUP153, ZINC FINGER, KEYWDS 2 ACETYLATION, CYTOPLASM, GTP-BINDING, HOST-VIRUS KEYWDS 3 INTERACTION, ISOPEPTIDE BOND, NUCLEOTIDE-BINDING, NUCLEUS, KEYWDS 4 PHOSPHOPROTEIN, POLYMORPHISM, PROTEIN TRANSPORT, TRANSPORT, KEYWDS 5 UBL CONJUGATION, DNA-BINDING, METAL-BINDING, MRNA KEYWDS 6 TRANSPORT, NUCLEAR PORE COMPLEX, TRANSLOCATION, ZINC, ZINC- KEYWDS 7 FINGER, TRANSPORT PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR J.R.PARTRIDGE,T.U.SCHWARTZ
REVDAT 1 04-AUG-09 3GJ6 0
JRNL AUTH J.R.PARTRIDGE,T.U.SCHWARTZ JRNL TITL CRYSTALLOGRAPHIC AND BIOCHEMICAL ANALYSIS OF THE JRNL TITL 2 RAN-BINDING ZINC FINGER DOMAIN. JRNL REF J.MOL.BIOL. V. 391 375 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19505478 JRNL DOI 10.1016/J.JMB.2009.06.011
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 7461 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 12.570 REMARK 3 FREE R VALUE TEST SET COUNT : 938 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.1194 - 5.1625 0.99 1029 138 0.1976 0.2713 REMARK 3 2 5.1625 - 4.0994 1.00 956 149 0.1607 0.2110 REMARK 3 3 4.0994 - 3.5818 0.98 922 138 0.1940 0.2592 REMARK 3 4 3.5818 - 3.2545 0.99 940 134 0.1979 0.3270 REMARK 3 5 3.2545 - 3.0214 1.00 916 147 0.2101 0.2695 REMARK 3 6 3.0214 - 2.8433 0.97 933 115 0.2370 0.3566 REMARK 3 7 2.8433 - 2.7000 0.90 827 117 0.2823 0.3766 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.25 REMARK 3 B_SOL : 48.93 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.810 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.33 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1892 REMARK 3 ANGLE : 1.138 2570 REMARK 3 CHIRALITY : 0.074 286 REMARK 3 PLANARITY : 0.004 323 REMARK 3 DIHEDRAL : 16.536 690 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -4.4270 26.9383 13.7668 REMARK 3 T TENSOR REMARK 3 T11: 0.1650 T22: 0.1924 REMARK 3 T33: 0.2547 T12: -0.0331 REMARK 3 T13: -0.0471 T23: -0.0811 REMARK 3 L TENSOR REMARK 3 L11: 2.9077 L22: 2.1367 REMARK 3 L33: 1.3794 L12: 0.1912 REMARK 3 L13: 0.0684 L23: -0.3487 REMARK 3 S TENSOR REMARK 3 S11: -0.0926 S12: 0.1424 S13: -0.4817 REMARK 3 S21: -0.1938 S22: 0.1788 S23: 0.0750 REMARK 3 S31: 0.0684 S32: -0.0137 S33: -0.0688 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 3GJ6 COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAR-09. REMARK 100 THE RCSB ID CODE IS RCSB051926.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7528 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.70000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.620 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3GJ3 REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PH 6.5, 18-20% PEG REMARK 280 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 30.06600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.15250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.06600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.15250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 234 LIES ON A SPECIAL POSITION.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 HIS A -2 REMARK 465 MET A -1 REMARK 465 ALA A 0 REMARK 465 SER A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 GLN A 4 REMARK 465 GLY A 5 REMARK 465 LEU A 209 REMARK 465 PRO A 210 REMARK 465 ASP A 211 REMARK 465 GLU A 212 REMARK 465 ASP A 213 REMARK 465 ASP A 214 REMARK 465 ASP A 215 REMARK 465 LEU A 216 REMARK 465 GLY B 653 REMARK 465 PRO B 654 REMARK 465 LEU B 655 REMARK 465 GLY B 656 REMARK 465 SER B 657 REMARK 465 ALA B 658 REMARK 465 GLY B 659 REMARK 465 SER B 660
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 43 -5.82 -140.27 REMARK 500 ALA A 67 34.76 -92.90 REMARK 500 GLN A 82 12.04 48.81 REMARK 500 CYS A 85 168.12 178.02 REMARK 500 LEU A 108 -65.19 -90.30 REMARK 500 ASN A 114 75.20 44.81 REMARK 500 VAL A 137 -20.20 -142.92 REMARK 500 LYS A 142 -131.73 69.59 REMARK 500 ASN A 143 54.73 -141.74 REMARK 500 VAL A 203 12.85 -64.25 REMARK 500 THR A 207 -66.16 -123.13 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 24 OG1 REMARK 620 2 HOH A 217 O 109.4 REMARK 620 3 HOH A 220 O 99.3 126.5 REMARK 620 4 HOH A 218 O 161.4 74.2 65.9 REMARK 620 5 HOH A 219 O 108.2 112.2 99.5 86.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 300 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 664 SG REMARK 620 2 CYS B 667 SG 118.2 REMARK 620 3 CYS B 678 SG 100.0 107.1 REMARK 620 N 1 2
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 301 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 302 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 300
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CH5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE RANGDP-NUP153ZNF2 COMPLEX REMARK 900 RELATED ID: 2GQE RELATED DB: PDB REMARK 900 MOLECULAR CHARACTERIZATION OF THE RAN BINDING ZINC FINGER REMARK 900 DOMAIN REMARK 900 RELATED ID: 1BYU RELATED DB: PDB REMARK 900 CANINE GDP-RAN REMARK 900 RELATED ID: 3GJ0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN NUCLEOPORIN REMARK 900 RELATED ID: 3GJ3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN NUCLEOPORIN IN COMPLEX WITH REMARK 900 NUP153 - ZINC FINGER MODULE 2 REMARK 900 RELATED ID: 3GJ4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN NUCLEOPORIN IN COMPLEX WITH REMARK 900 NUP153 - ZINC FINGER MODULE 3 REMARK 900 RELATED ID: 3GJ5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN NUCLEOPORIN F35S MUTANT IN REMARK 900 COMPLEX WITH NUP153 - ZINC FINGER MODULE 4 REMARK 900 RELATED ID: 3GJ7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN NUCLEOPORIN F35S MUTANT IN REMARK 900 COMPLEX WITH NUP153 - ZINC FINGER MODULE 12 REMARK 900 RELATED ID: 3GJ8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN NUCLEOPORIN F35S MUTANT IN REMARK 900 COMPLEX WITH NUP153 - ZINC FINGER MODULE 34
DBREF 3GJ6 A 2 216 UNP P62826 RAN_HUMAN 2 216 DBREF 3GJ6 B 658 686 UNP P49791 NU153_RAT 658 686
SEQADV 3GJ6 GLY A -4 UNP P62826 EXPRESSION TAG SEQADV 3GJ6 PRO A -3 UNP P62826 EXPRESSION TAG SEQADV 3GJ6 HIS A -2 UNP P62826 EXPRESSION TAG SEQADV 3GJ6 MET A -1 UNP P62826 EXPRESSION TAG SEQADV 3GJ6 ALA A 0 UNP P62826 EXPRESSION TAG SEQADV 3GJ6 SER A 1 UNP P62826 EXPRESSION TAG SEQADV 3GJ6 SER A 35 UNP P62826 PHE 35 ENGINEERED SEQADV 3GJ6 GLY B 653 UNP P49791 EXPRESSION TAG SEQADV 3GJ6 PRO B 654 UNP P49791 EXPRESSION TAG SEQADV 3GJ6 LEU B 655 UNP P49791 EXPRESSION TAG SEQADV 3GJ6 GLY B 656 UNP P49791 EXPRESSION TAG SEQADV 3GJ6 SER B 657 UNP P49791 EXPRESSION TAG
SEQRES 1 A 221 GLY PRO HIS MET ALA SER ALA ALA GLN GLY GLU PRO GLN SEQRES 2 A 221 VAL GLN PHE LYS LEU VAL LEU VAL GLY ASP GLY GLY THR SEQRES 3 A 221 GLY LYS THR THR PHE VAL LYS ARG HIS LEU THR GLY GLU SEQRES 4 A 221 SER GLU LYS LYS TYR VAL ALA THR LEU GLY VAL GLU VAL SEQRES 5 A 221 HIS PRO LEU VAL PHE HIS THR ASN ARG GLY PRO ILE LYS SEQRES 6 A 221 PHE ASN VAL TRP ASP THR ALA GLY GLN GLU LYS PHE GLY SEQRES 7 A 221 GLY LEU ARG ASP GLY TYR TYR ILE GLN ALA GLN CYS ALA SEQRES 8 A 221 ILE ILE MET PHE ASP VAL THR SER ARG VAL THR TYR LYS SEQRES 9 A 221 ASN VAL PRO ASN TRP HIS ARG ASP LEU VAL ARG VAL CYS SEQRES 10 A 221 GLU ASN ILE PRO ILE VAL LEU CYS GLY ASN LYS VAL ASP SEQRES 11 A 221 ILE LYS ASP ARG LYS VAL LYS ALA LYS SER ILE VAL PHE SEQRES 12 A 221 HIS ARG LYS LYS ASN LEU GLN TYR TYR ASP ILE SER ALA SEQRES 13 A 221 LYS SER ASN TYR ASN PHE GLU LYS PRO PHE LEU TRP LEU SEQRES 14 A 221 ALA ARG LYS LEU ILE GLY ASP PRO ASN LEU GLU PHE VAL SEQRES 15 A 221 ALA MET PRO ALA LEU ALA PRO PRO GLU VAL VAL MET ASP SEQRES 16 A 221 PRO ALA LEU ALA ALA GLN TYR GLU HIS ASP LEU GLU VAL SEQRES 17 A 221 ALA GLN THR THR ALA LEU PRO ASP GLU ASP ASP ASP LEU SEQRES 1 B 34 GLY PRO LEU GLY SER ALA GLY SER SER TRP GLN CYS ASP SEQRES 2 B 34 THR CYS LEU LEU GLN ASN LYS VAL THR ASP ASN LYS CYS SEQRES 3 B 34 ILE ALA CYS GLN ALA ALA LYS LEU
HET MG A 301 1 HET GDP A 302 28 HET ZN B 300 1
HETNAM MG MAGNESIUM ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM ZN ZINC ION
FORMUL 3 MG MG 2+ FORMUL 4 GDP C10 H15 N5 O11 P2 FORMUL 5 ZN ZN 2+ FORMUL 6 HOH *34(H2 O)
HELIX 1 1 GLY A 22 LYS A 28 1 7 HELIX 2 2 HIS A 30 LYS A 37 1 8 HELIX 3 3 GLY A 68 GLY A 73 5 6 HELIX 4 4 ARG A 76 ILE A 81 1 6 HELIX 5 5 SER A 94 ASN A 100 1 7 HELIX 6 6 ASN A 100 ARG A 110 1 11 HELIX 7 7 LYS A 132 ILE A 136 5 5 HELIX 8 8 VAL A 137 LYS A 141 5 5 HELIX 9 9 SER A 150 ASN A 154 5 5 HELIX 10 10 GLU A 158 GLY A 170 1 13 HELIX 11 11 ASP A 190 THR A 206 1 17
SHEET 1 A 7 LYS A 38 VAL A 40 0 SHEET 2 A 7 VAL A 45 THR A 54 -1 O VAL A 47 N LYS A 38 SHEET 3 A 7 GLY A 57 THR A 66 -1 O GLY A 57 N THR A 54 SHEET 4 A 7 GLN A 10 GLY A 17 1 N PHE A 11 O ASN A 62 SHEET 5 A 7 CYS A 85 ASP A 91 1 O MET A 89 N VAL A 16 SHEET 6 A 7 ILE A 117 ASN A 122 1 O CYS A 120 N ILE A 88 SHEET 7 A 7 LEU A 144 ASP A 148 1 O GLN A 145 N LEU A 119 SHEET 1 B 3 LYS A 38 VAL A 40 0 SHEET 2 B 3 VAL A 45 THR A 54 -1 O VAL A 47 N LYS A 38 SHEET 3 B 3 PHE A 176 ALA A 178 -1 O VAL A 177 N HIS A 53
LINK OG1 THR A 24 MG MG A 301 1555 1555 2.28 LINK SG CYS B 664 ZN ZN B 300 1555 1555 2.81 LINK SG CYS B 667 ZN ZN B 300 1555 1555 2.58 LINK SG CYS B 678 ZN ZN B 300 1555 1555 2.62 LINK MG MG A 301 O HOH A 217 1555 1555 2.45 LINK MG MG A 301 O HOH A 220 1555 1555 2.35 LINK MG MG A 301 O HOH A 218 1555 1555 2.48 LINK MG MG A 301 O HOH A 219 1555 1555 2.42
SITE 1 AC1 7 THR A 24 THR A 66 HOH A 217 HOH A 218 SITE 2 AC1 7 HOH A 219 HOH A 220 GDP A 302 SITE 1 AC2 19 GLY A 20 THR A 21 GLY A 22 LYS A 23 SITE 2 AC2 19 THR A 24 THR A 25 ASN A 122 LYS A 123 SITE 3 AC2 19 ASP A 125 ILE A 126 SER A 150 ALA A 151 SITE 4 AC2 19 LYS A 152 HOH A 217 HOH A 218 HOH A 220 SITE 5 AC2 19 HOH A 226 MG A 301 LYS B 672 SITE 1 AC3 4 CYS B 664 CYS B 667 CYS B 678 CYS B 681
CRYST1 60.132 80.305 54.634 90.00 90.00 90.00 P 21 21 2 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016630 0.000000 0.000000 0.00000
SCALE2 0.000000 0.012453 0.000000 0.00000
SCALE3 0.000000 0.000000 0.018304 0.00000