10 20 30 40 50 60 70 80 3F7A - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SIGNALING PROTEIN 07-NOV-08 3F7A
TITLE STRUCTURE OF ORTHORHOMBIC CRYSTAL FORM OF PSEUDOMONAS TITLE 2 AERUGINOSA RSSB
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE TWO-COMPONENT RESPONSE REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: PA2798; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS ADAPTOR PHOSPHATASE, UNKNOWN FUNCTION, SIGNALING PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR I.LEVCHENKO,R.A.GRANT,R.T.SAUER,T.A.BAKER
REVDAT 1 24-NOV-09 3F7A 0
JRNL AUTH I.LEVCHENKO,R.A.GRANT,R.T.SAUER,T.A.BAKER JRNL TITL THE STRUCTURE OF RSSB, A CLPX ADAPTOR PROTEIN THAT JRNL TITL 2 REGULATES SIGMA S JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 4.31 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.950 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 16037 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.298 REMARK 3 R VALUE (WORKING SET) : 0.296 REMARK 3 FREE R VALUE : 0.342 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.620 REMARK 3 FREE R VALUE TEST SET COUNT : 741 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.3088 - 7.3530 1.00 3090 148 0.2374 0.2884 REMARK 3 2 7.3530 - 5.8425 1.00 3078 132 0.3049 0.3565 REMARK 3 3 5.8425 - 5.1058 1.00 3065 156 0.3164 0.4085 REMARK 3 4 5.1058 - 4.6397 0.99 3066 162 0.3126 0.3264 REMARK 3 5 4.6397 - 4.3080 0.98 2997 143 0.3505 0.4128 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 196.64 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.940 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 40.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5693 REMARK 3 ANGLE : 0.556 7726 REMARK 3 CHIRALITY : 0.036 927 REMARK 3 PLANARITY : 0.003 1009 REMARK 3 DIHEDRAL : 9.791 2037 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 5-111 REMARK 3 ORIGIN FOR THE GROUP (A): -38.0430 30.5256 -18.8691 REMARK 3 T TENSOR REMARK 3 T11: 2.8342 T22: 1.9260 REMARK 3 T33: 2.9753 T12: 0.0499 REMARK 3 T13: 0.0477 T23: 0.0492 REMARK 3 L TENSOR REMARK 3 L11: 8.9871 L22: 7.9630 REMARK 3 L33: 10.1793 L12: 0.2615 REMARK 3 L13: 0.6918 L23: -0.1244 REMARK 3 S TENSOR REMARK 3 S11: 1.4146 S12: -0.1919 S13: -0.9337 REMARK 3 S21: -0.3842 S22: -0.3390 S23: 1.0592 REMARK 3 S31: -1.1414 S32: -1.2638 S33: -0.0010 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 112-147 REMARK 3 ORIGIN FOR THE GROUP (A): -20.1356 23.0471 -6.3942 REMARK 3 T TENSOR REMARK 3 T11: 3.1406 T22: 2.5440 REMARK 3 T33: 3.3832 T12: 0.1293 REMARK 3 T13: -0.2564 T23: -0.2660 REMARK 3 L TENSOR REMARK 3 L11: 2.0971 L22: 1.3640 REMARK 3 L33: -0.4533 L12: -0.5010 REMARK 3 L13: 3.6701 L23: -3.8800 REMARK 3 S TENSOR REMARK 3 S11: 0.5692 S12: -0.6720 S13: -1.5555 REMARK 3 S21: -0.4859 S22: 0.0951 S23: -0.1020 REMARK 3 S31: 0.2871 S32: -0.0724 S33: 0.0012 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESID 148-167 REMARK 3 ORIGIN FOR THE GROUP (A): 17.6318 27.6586 11.9424 REMARK 3 T TENSOR REMARK 3 T11: 4.0297 T22: 3.1504 REMARK 3 T33: 3.8786 T12: 0.0249 REMARK 3 T13: 0.3367 T23: 1.3181 REMARK 3 L TENSOR REMARK 3 L11: 0.5857 L22: 2.7099 REMARK 3 L33: -2.1642 L12: -1.1327 REMARK 3 L13: 0.2835 L23: -0.8597 REMARK 3 S TENSOR REMARK 3 S11: 2.5248 S12: 0.2151 S13: -0.0164 REMARK 3 S21: 0.4886 S22: -2.2728 S23: -2.1949 REMARK 3 S31: -1.1697 S32: 2.1503 S33: 0.0032 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND RESID 168-392 REMARK 3 ORIGIN FOR THE GROUP (A): 35.2804 12.8831 16.4086 REMARK 3 T TENSOR REMARK 3 T11: 3.2367 T22: 2.0293 REMARK 3 T33: 3.6301 T12: -0.1658 REMARK 3 T13: 0.0079 T23: 0.2589 REMARK 3 L TENSOR REMARK 3 L11: 6.7212 L22: 2.9657 REMARK 3 L33: 12.1503 L12: -1.5388 REMARK 3 L13: -5.4455 L23: 3.6875 REMARK 3 S TENSOR REMARK 3 S11: -0.5163 S12: -0.1575 S13: 0.2260 REMARK 3 S21: -0.5427 S22: 0.7019 S23: -1.0806 REMARK 3 S31: -0.1125 S32: 1.1461 S33: 0.0002 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND RESID 5-111 REMARK 3 ORIGIN FOR THE GROUP (A): -20.0301 12.0124 -34.5744 REMARK 3 T TENSOR REMARK 3 T11: 3.4561 T22: 2.2443 REMARK 3 T33: 2.9185 T12: -0.2308 REMARK 3 T13: 0.3955 T23: -0.2490 REMARK 3 L TENSOR REMARK 3 L11: 10.2499 L22: 8.5685 REMARK 3 L33: 6.3976 L12: 7.1739 REMARK 3 L13: -7.5282 L23: -1.4963 REMARK 3 S TENSOR REMARK 3 S11: -0.1806 S12: 1.7165 S13: -0.1290 REMARK 3 S21: -0.7498 S22: -0.4373 S23: -0.0582 REMARK 3 S31: -0.5888 S32: 0.1766 S33: 0.0008 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND RESID 112-147 REMARK 3 ORIGIN FOR THE GROUP (A): -9.2619 21.5092 -17.1507 REMARK 3 T TENSOR REMARK 3 T11: 3.6987 T22: 2.5051 REMARK 3 T33: 2.9388 T12: -0.0482 REMARK 3 T13: -0.5145 T23: -0.1274 REMARK 3 L TENSOR REMARK 3 L11: -0.7530 L22: -3.6059 REMARK 3 L33: 3.9600 L12: 4.8561 REMARK 3 L13: 1.6474 L23: 2.8056 REMARK 3 S TENSOR REMARK 3 S11: -0.2083 S12: 1.0144 S13: -0.5322 REMARK 3 S21: -1.0956 S22: 0.7867 S23: -0.6619 REMARK 3 S31: 0.3601 S32: 2.5896 S33: 0.0008 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND RESID 148-167 REMARK 3 ORIGIN FOR THE GROUP (A): 8.6084 20.6830 21.5985 REMARK 3 T TENSOR REMARK 3 T11: 3.8043 T22: 3.3468 REMARK 3 T33: 3.8948 T12: -1.1317 REMARK 3 T13: 0.2177 T23: -0.5236 REMARK 3 L TENSOR REMARK 3 L11: -0.2687 L22: -0.2415 REMARK 3 L33: 0.5446 L12: -2.7956 REMARK 3 L13: -0.6782 L23: 1.7354 REMARK 3 S TENSOR REMARK 3 S11: 1.3426 S12: -4.0743 S13: -0.9321 REMARK 3 S21: -0.9963 S22: -0.9586 S23: -1.3574 REMARK 3 S31: -0.5736 S32: -2.0900 S33: 0.0059 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND RESID 168-392 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0086 37.1206 37.1595 REMARK 3 T TENSOR REMARK 3 T11: 3.6815 T22: 2.5519 REMARK 3 T33: 2.9220 T12: -0.6210 REMARK 3 T13: 0.0985 T23: 0.0971 REMARK 3 L TENSOR REMARK 3 L11: 7.9240 L22: 7.3758 REMARK 3 L33: 6.7859 L12: -3.1690 REMARK 3 L13: -4.6157 L23: 2.2303 REMARK 3 S TENSOR REMARK 3 S11: 0.4402 S12: -0.5455 S13: 0.4647 REMARK 3 S21: 1.2510 S22: -0.0996 S23: 0.3959 REMARK 3 S31: 1.0123 S32: -0.8334 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 3F7A COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-NOV-08. REMARK 100 THE RCSB ID CODE IS RCSB050235.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97932 REMARK 200 MONOCHROMATOR : CRYSTAL REMARK 200 OPTICS : CRYSTAL MONOCHROMOMETER REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL REMARK 200 DATA SCALING SOFTWARE : HKL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8886 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 18.500 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 39.6670 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 16.70 REMARK 200 R MERGE FOR SHELL (I) : 0.49200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, TEMPERATURE 298K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 60.43650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 89.48500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 60.43650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 89.48500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 LYS A 3 REMARK 465 GLY A 176 REMARK 465 LEU A 177 REMARK 465 ASN A 239 REMARK 465 GLY A 240 REMARK 465 THR A 241 REMARK 465 LEU A 242 REMARK 465 PRO A 243 REMARK 465 GLU A 244 REMARK 465 GLY A 287 REMARK 465 HIS A 288 REMARK 465 GLY A 307 REMARK 465 LEU A 308 REMARK 465 PRO A 309 REMARK 465 ASP A 340 REMARK 465 VAL A 341 REMARK 465 LEU A 342 REMARK 465 PRO A 343 REMARK 465 LEU A 393 REMARK 465 ALA A 394 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 LYS B 3 REMARK 465 ASN B 239 REMARK 465 GLY B 240 REMARK 465 THR B 241 REMARK 465 LEU B 242 REMARK 465 PRO B 243 REMARK 465 GLU B 244 REMARK 465 GLY B 307 REMARK 465 LEU B 308 REMARK 465 PRO B 309 REMARK 465 LEU B 342 REMARK 465 PRO B 343 REMARK 465 LEU B 393 REMARK 465 ALA B 394
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 49 CG CD OE1 NE2 REMARK 470 ARG A 58 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 72 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 132 CG CD OE1 NE2 REMARK 470 GLU A 139 CG CD OE1 OE2 REMARK 470 GLU A 154 CG CD OE1 OE2 REMARK 470 GLN A 161 CG CD OE1 NE2 REMARK 470 SER A 173 OG REMARK 470 LEU A 187 CG CD1 CD2 REMARK 470 TYR A 188 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 189 CG CD1 CD2 REMARK 470 ARG A 198 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 202 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 234 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE A 245 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE A 259 CG1 CG2 CD1 REMARK 470 ASN A 260 CG OD1 ND2 REMARK 470 THR A 261 OG1 CG2 REMARK 470 LYS A 262 CG CD CE NZ REMARK 470 LEU A 263 CG CD1 CD2 REMARK 470 SER A 284 OG REMARK 470 GLU A 304 CG CD OE1 OE2 REMARK 470 ARG A 321 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 350 CG CD CE NZ REMARK 470 GLN A 357 CG CD OE1 NE2 REMARK 470 ARG A 369 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 49 CG CD OE1 NE2 REMARK 470 ARG B 58 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 132 CG CD OE1 NE2 REMARK 470 TYR B 134 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLN B 153 CG CD OE1 NE2 REMARK 470 GLU B 154 CG CD OE1 OE2 REMARK 470 GLN B 161 CG CD OE1 NE2 REMARK 470 SER B 173 OG REMARK 470 LEU B 187 CG CD1 CD2 REMARK 470 TYR B 188 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU B 189 CG CD1 CD2 REMARK 470 ARG B 198 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 202 CG CD NE CZ NH1 NH2 REMARK 470 TYR B 234 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE B 245 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE B 259 CG1 CG2 CD1 REMARK 470 ASN B 260 CG OD1 ND2 REMARK 470 THR B 261 OG1 CG2 REMARK 470 LYS B 262 CG CD CE NZ REMARK 470 LEU B 263 CG CD1 CD2 REMARK 470 SER B 284 OG REMARK 470 GLU B 304 CG CD OE1 OE2 REMARK 470 ARG B 321 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 340 CG OD1 OD2 REMARK 470 VAL B 341 CG1 CG2 REMARK 470 LYS B 350 CG CD CE NZ REMARK 470 GLN B 357 CG CD OE1 NE2 REMARK 470 ARG B 369 CG CD NE CZ NH1 NH2
REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 128 CD NE CZ NH1 NH2 REMARK 480 ARG A 143 CD NE CZ NH1 NH2 REMARK 480 ARG B 128 CD NE CZ NH1 NH2 REMARK 480 LYS B 137 CE NZ
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 5 -144.17 -135.44 REMARK 500 LEU A 9 82.53 -156.17 REMARK 500 ASN A 29 34.24 72.51 REMARK 500 ASP A 56 -143.35 -93.62 REMARK 500 LEU A 57 -60.90 -133.85 REMARK 500 GLN A 61 -104.79 75.22 REMARK 500 GLU A 77 90.01 -66.62 REMARK 500 ALA A 101 -67.53 -97.88 REMARK 500 PRO A 168 -177.85 -60.37 REMARK 500 TRP A 172 96.46 -54.26 REMARK 500 PHE A 179 58.67 -98.56 REMARK 500 SER A 180 170.04 -56.51 REMARK 500 ARG A 182 106.75 -177.43 REMARK 500 TYR A 188 -115.01 63.23 REMARK 500 GLU A 201 -27.12 69.48 REMARK 500 SER A 212 91.51 -51.26 REMARK 500 SER A 217 -8.80 -57.79 REMARK 500 ASN A 260 72.99 -101.31 REMARK 500 LYS A 262 70.35 -110.79 REMARK 500 LEU A 263 -6.23 67.40 REMARK 500 LEU A 270 48.91 -159.96 REMARK 500 THR A 282 77.08 -118.86 REMARK 500 SER A 284 69.64 178.77 REMARK 500 PRO A 290 118.25 -39.71 REMARK 500 LEU A 312 -11.79 -146.97 REMARK 500 ALA A 316 -81.75 -62.77 REMARK 500 SER A 330 72.08 -168.90 REMARK 500 ASP A 336 48.19 -70.12 REMARK 500 ALA A 345 -145.12 64.24 REMARK 500 LEU A 347 105.45 -179.04 REMARK 500 THR A 364 -44.20 75.52 REMARK 500 LEU A 365 -37.50 -159.43 REMARK 500 ASP A 382 153.53 60.68 REMARK 500 SER A 390 144.26 -176.81 REMARK 500 ARG A 391 97.98 -161.91 REMARK 500 LEU B 8 -163.94 -105.72 REMARK 500 LEU B 9 81.58 -168.73 REMARK 500 ILE B 11 75.90 -117.16 REMARK 500 SER B 28 31.69 -93.85 REMARK 500 ASN B 29 -7.08 78.15 REMARK 500 LEU B 39 -71.02 -79.22 REMARK 500 SER B 47 -70.10 -77.92 REMARK 500 GLN B 49 109.86 -48.67 REMARK 500 ASP B 56 -158.92 -92.25 REMARK 500 LEU B 57 -38.02 -136.40 REMARK 500 GLN B 61 -114.23 69.68 REMARK 500 LEU B 83 40.26 -82.08 REMARK 500 SER B 84 141.51 -37.84 REMARK 500 ALA B 101 -77.72 -58.21 REMARK 500 VAL B 129 -73.24 -53.74 REMARK 500 REMARK 500 THIS ENTRY HAS 72 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ES2 RELATED DB: PDB REMARK 900 C-TERMINAL DOMAIN REMARK 900 RELATED ID: 3EQ2 RELATED DB: PDB REMARK 900 HEXAGONAL CRYSTAL FORM REMARK 900 RELATED ID: 3F79 RELATED DB: PDB
DBREF 3F7A A 1 394 UNP Q9I045 Q9I045_PSEAE 1 394 DBREF 3F7A B 1 394 UNP Q9I045 Q9I045_PSEAE 1 394
SEQRES 1 A 394 MET HIS LYS VAL SER ALA THR LEU LEU ILE ILE ASP ASP SEQRES 2 A 394 ASP GLU VAL VAL ARG GLU SER LEU ALA ALA TYR LEU GLU SEQRES 3 A 394 ASP SER ASN PHE LYS VAL LEU GLN ALA LEU ASN GLY LEU SEQRES 4 A 394 GLN GLY LEU GLN ILE PHE GLU SER GLU GLN PRO ASP LEU SEQRES 5 A 394 VAL ILE CYS ASP LEU ARG MSE PRO GLN ILE ASP GLY LEU SEQRES 6 A 394 GLU LEU ILE ARG ARG ILE ARG GLN THR ALA SER GLU THR SEQRES 7 A 394 PRO ILE ILE VAL LEU SER GLY ALA GLY VAL MET SER ASP SEQRES 8 A 394 ALA VAL GLU ALA LEU ARG LEU GLY ALA ALA ASP TYR LEU SEQRES 9 A 394 ILE LYS PRO LEU GLU ASP LEU ALA VAL LEU GLU HIS SER SEQRES 10 A 394 VAL ARG ARG ALA LEU ASP ARG ALA TYR LEU ARG VAL GLU SEQRES 11 A 394 ASN GLN ARG TYR ARG ASP LYS LEU GLU ALA ALA ASN ARG SEQRES 12 A 394 GLU LEU GLN ALA SER LEU ASN LEU LEU GLN GLU ASP GLN SEQRES 13 A 394 ASN ALA GLY ARG GLN VAL GLN MSE ASN MSE LEU PRO VAL SEQRES 14 A 394 THR PRO TRP SER ILE GLU GLY LEU GLU PHE SER HIS ARG SEQRES 15 A 394 ILE ILE PRO SER LEU TYR LEU SER GLY ASP PHE VAL ASP SEQRES 16 A 394 TYR PHE ARG VAL ASP GLU ARG ARG VAL ALA PHE TYR LEU SEQRES 17 A 394 ALA ASP VAL SER GLY HIS GLY ALA SER SER ALA PHE VAL SEQRES 18 A 394 THR VAL LEU LEU LYS PHE MSE THR THR ARG LEU LEU TYR SEQRES 19 A 394 GLU SER ARG ARG ASN GLY THR LEU PRO GLU PHE LYS PRO SEQRES 20 A 394 SER GLU VAL LEU ALA HIS ILE ASN ARG GLY LEU ILE ASN SEQRES 21 A 394 THR LYS LEU GLY LYS HIS VAL THR MSE LEU GLY GLY VAL SEQRES 22 A 394 ILE ASP LEU GLU LYS ASN SER LEU THR TYR SER ILE GLY SEQRES 23 A 394 GLY HIS LEU PRO LEU PRO VAL LEU PHE VAL GLU GLY GLN SEQRES 24 A 394 ALA GLY TYR LEU GLU GLY ARG GLY LEU PRO VAL GLY LEU SEQRES 25 A 394 PHE ASP ASP ALA THR TYR ASP ASP ARG VAL MSE GLU LEU SEQRES 26 A 394 PRO PRO SER PHE SER LEU SER LEU PHE SER ASP GLY ILE SEQRES 27 A 394 LEU ASP VAL LEU PRO GLY ALA THR LEU LYS GLU LYS GLU SEQRES 28 A 394 ALA SER LEU PRO GLU GLN VAL ALA ALA ALA GLY GLY THR SEQRES 29 A 394 LEU ASP GLY LEU ARG GLN VAL PHE GLY LEU ALA ASN LEU SEQRES 30 A 394 ALA GLU MET PRO ASP ASP ILE ALA LEU LEU VAL LEU SER SEQRES 31 A 394 ARG ASN LEU ALA SEQRES 1 B 394 MET HIS LYS VAL SER ALA THR LEU LEU ILE ILE ASP ASP SEQRES 2 B 394 ASP GLU VAL VAL ARG GLU SER LEU ALA ALA TYR LEU GLU SEQRES 3 B 394 ASP SER ASN PHE LYS VAL LEU GLN ALA LEU ASN GLY LEU SEQRES 4 B 394 GLN GLY LEU GLN ILE PHE GLU SER GLU GLN PRO ASP LEU SEQRES 5 B 394 VAL ILE CYS ASP LEU ARG MSE PRO GLN ILE ASP GLY LEU SEQRES 6 B 394 GLU LEU ILE ARG ARG ILE ARG GLN THR ALA SER GLU THR SEQRES 7 B 394 PRO ILE ILE VAL LEU SER GLY ALA GLY VAL MET SER ASP SEQRES 8 B 394 ALA VAL GLU ALA LEU ARG LEU GLY ALA ALA ASP TYR LEU SEQRES 9 B 394 ILE LYS PRO LEU GLU ASP LEU ALA VAL LEU GLU HIS SER SEQRES 10 B 394 VAL ARG ARG ALA LEU ASP ARG ALA TYR LEU ARG VAL GLU SEQRES 11 B 394 ASN GLN ARG TYR ARG ASP LYS LEU GLU ALA ALA ASN ARG SEQRES 12 B 394 GLU LEU GLN ALA SER LEU ASN LEU LEU GLN GLU ASP GLN SEQRES 13 B 394 ASN ALA GLY ARG GLN VAL GLN MSE ASN MSE LEU PRO VAL SEQRES 14 B 394 THR PRO TRP SER ILE GLU GLY LEU GLU PHE SER HIS ARG SEQRES 15 B 394 ILE ILE PRO SER LEU TYR LEU SER GLY ASP PHE VAL ASP SEQRES 16 B 394 TYR PHE ARG VAL ASP GLU ARG ARG VAL ALA PHE TYR LEU SEQRES 17 B 394 ALA ASP VAL SER GLY HIS GLY ALA SER SER ALA PHE VAL SEQRES 18 B 394 THR VAL LEU LEU LYS PHE MSE THR THR ARG LEU LEU TYR SEQRES 19 B 394 GLU SER ARG ARG ASN GLY THR LEU PRO GLU PHE LYS PRO SEQRES 20 B 394 SER GLU VAL LEU ALA HIS ILE ASN ARG GLY LEU ILE ASN SEQRES 21 B 394 THR LYS LEU GLY LYS HIS VAL THR MSE LEU GLY GLY VAL SEQRES 22 B 394 ILE ASP LEU GLU LYS ASN SER LEU THR TYR SER ILE GLY SEQRES 23 B 394 GLY HIS LEU PRO LEU PRO VAL LEU PHE VAL GLU GLY GLN SEQRES 24 B 394 ALA GLY TYR LEU GLU GLY ARG GLY LEU PRO VAL GLY LEU SEQRES 25 B 394 PHE ASP ASP ALA THR TYR ASP ASP ARG VAL MSE GLU LEU SEQRES 26 B 394 PRO PRO SER PHE SER LEU SER LEU PHE SER ASP GLY ILE SEQRES 27 B 394 LEU ASP VAL LEU PRO GLY ALA THR LEU LYS GLU LYS GLU SEQRES 28 B 394 ALA SER LEU PRO GLU GLN VAL ALA ALA ALA GLY GLY THR SEQRES 29 B 394 LEU ASP GLY LEU ARG GLN VAL PHE GLY LEU ALA ASN LEU SEQRES 30 B 394 ALA GLU MET PRO ASP ASP ILE ALA LEU LEU VAL LEU SER SEQRES 31 B 394 ARG ASN LEU ALA
MODRES 3F7A MSE A 59 MET SELENOMETHIONINE MODRES 3F7A MSE A 164 MET SELENOMETHIONINE MODRES 3F7A MSE A 166 MET SELENOMETHIONINE MODRES 3F7A MSE A 228 MET SELENOMETHIONINE MODRES 3F7A MSE A 269 MET SELENOMETHIONINE MODRES 3F7A MSE A 323 MET SELENOMETHIONINE MODRES 3F7A MSE B 59 MET SELENOMETHIONINE MODRES 3F7A MSE B 164 MET SELENOMETHIONINE MODRES 3F7A MSE B 166 MET SELENOMETHIONINE MODRES 3F7A MSE B 228 MET SELENOMETHIONINE MODRES 3F7A MSE B 269 MET SELENOMETHIONINE MODRES 3F7A MSE B 323 MET SELENOMETHIONINE
HET MSE A 59 8 HET MSE A 164 8 HET MSE A 166 8 HET MSE A 228 8 HET MSE A 269 8 HET MSE A 323 8 HET MSE B 59 8 HET MSE B 164 8 HET MSE B 166 8 HET MSE B 228 8 HET MSE B 269 8 HET MSE B 323 8
HETNAM MSE SELENOMETHIONINE
FORMUL 1 MSE 12(C5 H11 N O2 SE)
HELIX 1 1 ASP A 14 GLU A 26 1 13 HELIX 2 2 ASN A 37 GLU A 48 1 12 HELIX 3 3 ASP A 63 THR A 74 1 12 HELIX 4 4 VAL A 88 LEU A 96 1 9 HELIX 5 5 LEU A 111 ASN A 150 1 40 HELIX 6 6 LEU A 151 VAL A 162 1 12 HELIX 7 7 GLY A 215 ARG A 231 1 17 HELIX 8 8 PRO A 247 ILE A 259 1 13 HELIX 9 9 GLU A 349 SER A 353 5 5 HELIX 10 10 LEU A 354 GLY A 362 1 9 HELIX 11 11 VAL B 16 GLU B 26 1 11 HELIX 12 12 ASP B 27 ASN B 29 5 3 HELIX 13 13 LEU B 39 GLU B 48 1 10 HELIX 14 14 ASP B 63 ARG B 72 1 10 HELIX 15 15 MET B 89 GLU B 94 1 6 HELIX 16 16 ALA B 112 ALA B 147 1 36 HELIX 17 17 LEU B 149 ASN B 165 1 17 HELIX 18 18 GLY B 215 SER B 236 1 22 HELIX 19 19 LYS B 246 ASN B 260 1 15 HELIX 20 20 LEU B 354 GLY B 362 1 9 HELIX 21 21 LEU B 365 ASN B 376 1 12
SHEET 1 A 4 LYS A 31 LEU A 33 0 SHEET 2 A 4 THR A 7 ILE A 11 1 N LEU A 8 O LYS A 31 SHEET 3 A 4 LEU A 52 CYS A 55 1 O ILE A 54 N ILE A 11 SHEET 4 A 4 ILE A 80 ILE A 81 1 O ILE A 81 N CYS A 55 SHEET 1 B 3 ARG A 182 ILE A 184 0 SHEET 2 B 3 ILE A 384 VAL A 388 -1 O ILE A 384 N ILE A 184 SHEET 3 B 3 SER A 332 PHE A 334 -1 N LEU A 333 O LEU A 387 SHEET 1 C 3 ASP A 192 ASP A 195 0 SHEET 2 C 3 TYR A 207 VAL A 211 -1 O TYR A 207 N ASP A 195 SHEET 3 C 3 VAL A 267 MSE A 269 -1 O THR A 268 N ASP A 210 SHEET 1 D 5 ARG A 198 VAL A 199 0 SHEET 2 D 5 ARG A 203 VAL A 204 -1 O ARG A 203 N VAL A 199 SHEET 3 D 5 GLY A 272 ASP A 275 -1 O ILE A 274 N VAL A 204 SHEET 4 D 5 SER A 280 TYR A 283 -1 O THR A 282 N VAL A 273 SHEET 5 D 5 VAL A 322 GLU A 324 -1 O MSE A 323 N LEU A 281 SHEET 1 E 5 TRP B 172 ILE B 174 0 SHEET 2 E 5 LEU B 177 HIS B 181 -1 O LEU B 177 N ILE B 174 SHEET 3 E 5 LEU B 386 VAL B 388 -1 N VAL B 388 O SER B 180 SHEET 4 E 5 LEU B 331 PHE B 334 -1 N LEU B 333 O LEU B 387 SHEET 5 E 5 VAL B 293 LEU B 294 -1 N VAL B 293 O SER B 332 SHEET 1 F 3 ASP B 192 ASP B 195 0 SHEET 2 F 3 ARG B 203 VAL B 211 -1 O ALA B 209 N PHE B 193 SHEET 3 F 3 VAL B 267 THR B 268 -1 O THR B 268 N ASP B 210 SHEET 1 G 5 ARG B 198 VAL B 199 0 SHEET 2 G 5 ARG B 203 VAL B 211 -1 O ARG B 203 N VAL B 199 SHEET 3 G 5 LEU B 270 ASP B 275 -1 O ILE B 274 N VAL B 204 SHEET 4 G 5 SER B 280 ILE B 285 -1 O SER B 280 N ASP B 275 SHEET 5 G 5 ASP B 319 GLU B 324 -1 O MSE B 323 N LEU B 281
LINK C ARG A 58 N MSE A 59 1555 1555 1.33 LINK C MSE A 59 N PRO A 60 1555 1555 1.34 LINK C GLN A 163 N MSE A 164 1555 1555 1.33 LINK C MSE A 164 N ASN A 165 1555 1555 1.33 LINK C ASN A 165 N MSE A 166 1555 1555 1.33 LINK C MSE A 166 N LEU A 167 1555 1555 1.33 LINK C PHE A 227 N MSE A 228 1555 1555 1.33 LINK C MSE A 228 N THR A 229 1555 1555 1.33 LINK C THR A 268 N MSE A 269 1555 1555 1.33 LINK C MSE A 269 N LEU A 270 1555 1555 1.33 LINK C VAL A 322 N MSE A 323 1555 1555 1.33 LINK C MSE A 323 N GLU A 324 1555 1555 1.33 LINK C ARG B 58 N MSE B 59 1555 1555 1.33 LINK C MSE B 59 N PRO B 60 1555 1555 1.34 LINK C GLN B 163 N MSE B 164 1555 1555 1.33 LINK C MSE B 164 N ASN B 165 1555 1555 1.33 LINK C ASN B 165 N MSE B 166 1555 1555 1.33 LINK C MSE B 166 N LEU B 167 1555 1555 1.33 LINK C PHE B 227 N MSE B 228 1555 1555 1.33 LINK C MSE B 228 N THR B 229 1555 1555 1.33 LINK C THR B 268 N MSE B 269 1555 1555 1.33 LINK C MSE B 269 N LEU B 270 1555 1555 1.33 LINK C VAL B 322 N MSE B 323 1555 1555 1.33 LINK C MSE B 323 N GLU B 324 1555 1555 1.33
CISPEP 1 LYS A 106 PRO A 107 0 -6.70 CISPEP 2 THR A 170 PRO A 171 0 -6.60 CISPEP 3 LYS B 106 PRO B 107 0 -3.73 CISPEP 4 THR B 170 PRO B 171 0 -4.37
CRYST1 120.873 178.970 57.067 90.00 90.00 90.00 P 21 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.008273 0.000000 0.000000 0.00000
SCALE2 0.000000 0.005588 0.000000 0.00000
SCALE3 0.000000 0.000000 0.017523 0.00000