3F3C - Header Asymmetric Unit

HEADER TRANSPORT PROTEIN 30-OCT-08 3F3C

TITLE CRYSTAL STRUCTURE OF LEUT BOUND TO 4-FLUORO-L-PHENYLALANINE TITLE 2 AND SODIUM

COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSPORTER; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LEUCINE TRANSPORTER; COMPND 5 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; SOURCE 3 ORGANISM_TAXID: 63363; SOURCE 4 STRAIN: VF5; SOURCE 5 GENE: SNF, AQ_2077; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C41(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET16B

KEYWDS SLC6, NSS, TRANSMEMBRANE, SODIUM-COUPLED, TRANSPORTER, KEYWDS 2 SYMPORT, TRANSPORT, TRANSPORT PROTEIN

EXPDTA X-RAY DIFFRACTION

AUTHOR S.K.SINGH,C.L.PISCITELLI,A.YAMASHITA,E.GOUAUX

REVDAT 2 10-MAR-09 3F3C 1 JRNL REVDAT 1 23-DEC-08 3F3C 0

JRNL AUTH S.K.SINGH,C.L.PISCITELLI,A.YAMASHITA,E.GOUAUX JRNL TITL A COMPETITIVE INHIBITOR TRAPS LEUT IN AN JRNL TITL 2 OPEN-TO-OUT CONFORMATION. JRNL REF SCIENCE V. 322 1655 2008 JRNL REFN ISSN 0036-8075 JRNL PMID 19074341 JRNL DOI 10.1126/SCIENCE.1166777

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 3 NUMBER OF REFLECTIONS : 31935 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1694 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1597 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 62.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.2390 REMARK 3 BIN FREE R VALUE SET COUNT : 82 REMARK 3 BIN FREE R VALUE : 0.2590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4069 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 115 REMARK 3 SOLVENT ATOMS : 88 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.23000 REMARK 3 B22 (A**2) : -2.04000 REMARK 3 B33 (A**2) : -0.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.230 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.191 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.128 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.748 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4317 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5877 ; 0.989 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 519 ; 3.511 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 162 ;32.915 ;21.975 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 658 ;11.852 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;17.038 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 674 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3161 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2264 ; 0.214 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3091 ; 0.330 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 292 ; 0.180 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 7 ; 0.182 ; 0.500 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 48 ; 0.193 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.275 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2546 ; 1.212 ; 3.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4112 ; 1.951 ; 4.500 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1869 ; 1.169 ; 3.500 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1759 ; 1.693 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS

REMARK 4 REMARK 4 3F3C COMPLIES WITH FORMAT V. 3.20, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-NOV-08. REMARK 100 THE RCSB ID CODE IS RCSB050094.

REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33636 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 62.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 64.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.52700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2A65 REMARK 200 REMARK 200 REMARK: NULL

REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 0.4M NACL, 24-26% PEG- REMARK 280 MME 550, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K

REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 45.06000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.16100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 45.06000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 43.16100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL

REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.

REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 82.74046 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 81.24454 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000

REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 588 LIES ON A SPECIAL POSITION.

REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 VAL A 3 REMARK 465 LYS A 4 REMARK 465 ASN A 133 REMARK 465 ALA A 134 REMARK 465 LEU A 516 REMARK 465 VAL A 517 REMARK 465 PRO A 518 REMARK 465 ARG A 519

REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 6 CD OE1 OE2 REMARK 470 GLU A 434 CG CD OE1 OE2

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 54 -53.53 -128.30 REMARK 500 PRO A 160 46.24 -81.47 REMARK 500 ILE A 297 -73.27 -96.03 REMARK 500 LYS A 398 -1.91 81.63 REMARK 500 TYR A 471 -31.16 -141.16 REMARK 500 GLU A 478 42.07 -101.81 REMARK 500 REMARK 500 REMARK: NULL

REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 576 DISTANCE = 5.41 ANGSTROMS REMARK 525 HOH A 595 DISTANCE = 5.04 ANGSTROMS REMARK 525 HOH A 604 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH A 606 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH A 607 DISTANCE = 5.25 ANGSTROMS

REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PFF A 601 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BOG A 701 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BOG A 702 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BOG A 703 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BOG A 704 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BOG A 705 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 751 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 752

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2A65 RELATED DB: PDB REMARK 900 SAME PROTEIN COMPLEXED WITH L-LEUCINE AND SODIUM REMARK 900 RELATED ID: 2QEI RELATED DB: PDB REMARK 900 SAME PROTEIN COMPLEXED WITH L-ALANINE, SODIUM, AND REMARK 900 CLOMIPRAMINE REMARK 900 RELATED ID: 3F3A RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF LEUT BOUND TO L-TRYPTOPHAN AND SODIUM REMARK 900 RELATED ID: 3F3D RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF LEUT BOUND TO L-METHIONINE AND SODIUM REMARK 900 RELATED ID: 3F3E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF LEUT BOUND TO L-LEUCINE (30 MM) AND REMARK 900 SODIUM REMARK 900 RELATED ID: 3F48 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF LEUT COMPLEXED WITH L-ALANINE AND REMARK 900 SODIUM REMARK 900 RELATED ID: 3F4I RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF LEUT BOUND TO L-SELENOMETHIONINE AND REMARK 900 SODIUM REMARK 900 RELATED ID: 3F4J RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF LEUT BOUND TO GLYCINE AND SODIUM

DBREF 3F3C A 1 513 UNP O67854 O67854_AQUAE 1 513

SEQADV 3F3C GLY A 514 UNP O67854 EXPRESSION TAG SEQADV 3F3C THR A 515 UNP O67854 EXPRESSION TAG SEQADV 3F3C LEU A 516 UNP O67854 EXPRESSION TAG SEQADV 3F3C VAL A 517 UNP O67854 EXPRESSION TAG SEQADV 3F3C PRO A 518 UNP O67854 EXPRESSION TAG SEQADV 3F3C ARG A 519 UNP O67854 EXPRESSION TAG

SEQRES 1 A 519 MET GLU VAL LYS ARG GLU HIS TRP ALA THR ARG LEU GLY SEQRES 2 A 519 LEU ILE LEU ALA MET ALA GLY ASN ALA VAL GLY LEU GLY SEQRES 3 A 519 ASN PHE LEU ARG PHE PRO VAL GLN ALA ALA GLU ASN GLY SEQRES 4 A 519 GLY GLY ALA PHE MET ILE PRO TYR ILE ILE ALA PHE LEU SEQRES 5 A 519 LEU VAL GLY ILE PRO LEU MET TRP ILE GLU TRP ALA MET SEQRES 6 A 519 GLY ARG TYR GLY GLY ALA GLN GLY HIS GLY THR THR PRO SEQRES 7 A 519 ALA ILE PHE TYR LEU LEU TRP ARG ASN ARG PHE ALA LYS SEQRES 8 A 519 ILE LEU GLY VAL PHE GLY LEU TRP ILE PRO LEU VAL VAL SEQRES 9 A 519 ALA ILE TYR TYR VAL TYR ILE GLU SER TRP THR LEU GLY SEQRES 10 A 519 PHE ALA ILE LYS PHE LEU VAL GLY LEU VAL PRO GLU PRO SEQRES 11 A 519 PRO PRO ASN ALA THR ASP PRO ASP SER ILE LEU ARG PRO SEQRES 12 A 519 PHE LYS GLU PHE LEU TYR SER TYR ILE GLY VAL PRO LYS SEQRES 13 A 519 GLY ASP GLU PRO ILE LEU LYS PRO SER LEU PHE ALA TYR SEQRES 14 A 519 ILE VAL PHE LEU ILE THR MET PHE ILE ASN VAL SER ILE SEQRES 15 A 519 LEU ILE ARG GLY ILE SER LYS GLY ILE GLU ARG PHE ALA SEQRES 16 A 519 LYS ILE ALA MET PRO THR LEU PHE ILE LEU ALA VAL PHE SEQRES 17 A 519 LEU VAL ILE ARG VAL PHE LEU LEU GLU THR PRO ASN GLY SEQRES 18 A 519 THR ALA ALA ASP GLY LEU ASN PHE LEU TRP THR PRO ASP SEQRES 19 A 519 PHE GLU LYS LEU LYS ASP PRO GLY VAL TRP ILE ALA ALA SEQRES 20 A 519 VAL GLY GLN ILE PHE PHE THR LEU SER LEU GLY PHE GLY SEQRES 21 A 519 ALA ILE ILE THR TYR ALA SER TYR VAL ARG LYS ASP GLN SEQRES 22 A 519 ASP ILE VAL LEU SER GLY LEU THR ALA ALA THR LEU ASN SEQRES 23 A 519 GLU LYS ALA GLU VAL ILE LEU GLY GLY SER ILE SER ILE SEQRES 24 A 519 PRO ALA ALA VAL ALA PHE PHE GLY VAL ALA ASN ALA VAL SEQRES 25 A 519 ALA ILE ALA LYS ALA GLY ALA PHE ASN LEU GLY PHE ILE SEQRES 26 A 519 THR LEU PRO ALA ILE PHE SER GLN THR ALA GLY GLY THR SEQRES 27 A 519 PHE LEU GLY PHE LEU TRP PHE PHE LEU LEU PHE PHE ALA SEQRES 28 A 519 GLY LEU THR SER SER ILE ALA ILE MET GLN PRO MET ILE SEQRES 29 A 519 ALA PHE LEU GLU ASP GLU LEU LYS LEU SER ARG LYS HIS SEQRES 30 A 519 ALA VAL LEU TRP THR ALA ALA ILE VAL PHE PHE SER ALA SEQRES 31 A 519 HIS LEU VAL MET PHE LEU ASN LYS SER LEU ASP GLU MET SEQRES 32 A 519 ASP PHE TRP ALA GLY THR ILE GLY VAL VAL PHE PHE GLY SEQRES 33 A 519 LEU THR GLU LEU ILE ILE PHE PHE TRP ILE PHE GLY ALA SEQRES 34 A 519 ASP LYS ALA TRP GLU GLU ILE ASN ARG GLY GLY ILE ILE SEQRES 35 A 519 LYS VAL PRO ARG ILE TYR TYR TYR VAL MET ARG TYR ILE SEQRES 36 A 519 THR PRO ALA PHE LEU ALA VAL LEU LEU VAL VAL TRP ALA SEQRES 37 A 519 ARG GLU TYR ILE PRO LYS ILE MET GLU GLU THR HIS TRP SEQRES 38 A 519 THR VAL TRP ILE THR ARG PHE TYR ILE ILE GLY LEU PHE SEQRES 39 A 519 LEU PHE LEU THR PHE LEU VAL PHE LEU ALA GLU ARG ARG SEQRES 40 A 519 ARG ASN HIS GLU SER ALA GLY THR LEU VAL PRO ARG

HET PFF A 601 13 HET BOG A 701 20 HET BOG A 702 20 HET BOG A 703 20 HET BOG A 704 20 HET BOG A 705 20 HET NA A 751 1 HET NA A 752 1

HETNAM PFF 4-FLUORO-L-PHENYLALANINE HETNAM BOG B-OCTYLGLUCOSIDE HETNAM NA SODIUM ION

FORMUL 2 PFF C9 H10 F N O2 FORMUL 3 BOG 5(C14 H28 O6) FORMUL 8 NA 2(NA 1+) FORMUL 10 HOH *88(H2 O)

HELIX 1 1 THR A 10 VAL A 23 1 14 HELIX 2 2 GLY A 24 LEU A 29 1 6 HELIX 3 3 LEU A 29 ASN A 38 1 10 HELIX 4 4 GLY A 40 VAL A 54 1 15 HELIX 5 5 VAL A 54 GLN A 72 1 19 HELIX 6 6 THR A 76 TRP A 85 1 10 HELIX 7 7 ASN A 87 VAL A 95 1 9 HELIX 8 8 VAL A 95 VAL A 124 1 30 HELIX 9 9 ASP A 136 GLY A 153 1 18 HELIX 10 10 SER A 165 ILE A 184 1 20 HELIX 11 11 GLY A 190 LEU A 215 1 26 HELIX 12 12 ALA A 223 THR A 232 1 10 HELIX 13 13 ASP A 234 LEU A 238 5 5 HELIX 14 14 ASP A 240 LEU A 255 1 16 HELIX 15 15 GLY A 260 SER A 267 1 8 HELIX 16 16 ILE A 275 ILE A 292 1 18 HELIX 17 17 LEU A 293 GLY A 307 1 15 HELIX 18 18 GLY A 307 GLY A 318 1 12 HELIX 19 19 PHE A 320 ILE A 325 1 6 HELIX 20 20 ILE A 325 SER A 332 1 8 HELIX 21 21 GLY A 336 GLU A 370 1 35 HELIX 22 22 SER A 374 LEU A 396 1 23 HELIX 23 23 LYS A 398 ALA A 407 1 10 HELIX 24 24 THR A 409 TRP A 425 1 17 HELIX 25 25 GLY A 428 ARG A 438 1 11 HELIX 26 26 ARG A 446 TYR A 454 1 9 HELIX 27 27 TYR A 454 TYR A 471 1 18 HELIX 28 28 ILE A 472 GLU A 477 1 6 HELIX 29 29 THR A 482 GLY A 514 1 33

SHEET 1 A 2 GLU A 217 THR A 218 0 SHEET 2 A 2 GLY A 221 THR A 222 -1 O GLY A 221 N THR A 218

SITE 1 AC1 15 ASN A 21 ALA A 22 GLY A 24 LEU A 25 SITE 2 AC1 15 GLY A 26 ASN A 27 TYR A 108 PHE A 253 SITE 3 AC1 15 THR A 254 SER A 256 PHE A 259 ALA A 261 SITE 4 AC1 15 SER A 355 ILE A 359 NA A 752 SITE 1 AC2 5 ARG A 142 GLU A 146 PRO A 445 ARG A 446 SITE 2 AC2 5 HOH A 580 SITE 1 AC3 4 LEU A 166 PHE A 167 ARG A 438 GLY A 439 SITE 1 AC4 6 PRO A 164 LEU A 166 TYR A 169 PHE A 395 SITE 2 AC4 6 HOH A 590 BOG A 704 SITE 1 AC5 8 LYS A 163 HIS A 391 LEU A 392 TRP A 484 SITE 2 AC5 8 PHE A 488 HOH A 546 BOG A 703 BOG A 705 SITE 1 AC6 8 ILE A 161 LYS A 431 MET A 476 GLU A 477 SITE 2 AC6 8 GLU A 478 THR A 479 TRP A 484 BOG A 704 SITE 1 AC7 5 GLY A 20 VAL A 23 ALA A 351 THR A 354 SITE 2 AC7 5 SER A 355 SITE 1 AC8 5 ALA A 22 ASN A 27 THR A 254 ASN A 286 SITE 2 AC8 5 PFF A 601

CRYST1 90.120 86.322 81.579 90.00 95.19 90.00 C 1 2 1 4

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 0.011096 0.000000 0.001009 0.00000

SCALE2 0.000000 0.011585 0.000000 0.00000

SCALE3 0.000000 0.000000 0.012309 0.00000