10 20 30 40 50 60 70 80 3E60 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 14-AUG-08 3E60
TITLE CRYSTAL STRUCTURE OF 3-OXOACYL-(ACYL CARRIER PROTEIN) TITLE 2 SYNTHASE II FROM BARTONELLA HENSELAE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN ] SYNTHASE II; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BARTONELLA HENSELAE; SOURCE 3 ORGANISM_COMMON: ROCHALIMAEA HENSELAE; SOURCE 4 ORGANISM_TAXID: 38323; SOURCE 5 STRAIN: HOUSTON-1; SOURCE 6 GENE: FABF1, BH05370; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: AVA0421
KEYWDS SSGCID, DECODE, TRANSFERASE, STRUCTURAL GENOMICS, SEATTLE KEYWDS 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE
EXPDTA X-RAY DIFFRACTION
AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE AUTHOR 2 (SSGCID)
REVDAT 2 24-FEB-09 3E60 1 VERSN REVDAT 1 26-AUG-08 3E60 0
JRNL AUTH SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS JRNL AUTH 2 DISEASE (SSGCID) JRNL TITL CRYSTAL STRUCTURE OF 3-OXOACYL-(ACYL CARRIER JRNL TITL 2 PROTEIN) SYNTHASE II FROM BARTONELLA HENSELAE JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0067 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 78248 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3852 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5358 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.1930 REMARK 3 BIN FREE R VALUE SET COUNT : 308 REMARK 3 BIN FREE R VALUE : 0.2330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6269 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 779 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.38000 REMARK 3 B22 (A**2) : 0.38000 REMARK 3 B33 (A**2) : -0.76000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.128 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.114 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.436 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6378 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4322 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8634 ; 1.095 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10496 ; 1.189 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 838 ; 5.245 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 268 ;33.357 ;23.134 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1050 ;13.512 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 58 ;13.469 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 980 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7262 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1304 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4146 ; 0.526 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1732 ; 0.106 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6613 ; 1.049 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2232 ; 1.820 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2021 ; 3.125 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 3E60 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-AUG-08. REMARK 100 THE RCSB ID CODE IS RCSB048918.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMETER REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78307 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.12300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.57800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1W0I WITH INSERTIONS REMOVED REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROPLEX CONDITION B12, 15% PEG REMARK 280 4000, 0.1 M MGCL2, 0.1 M HEPES-NAOH PH 7.0, 0.4/0.4UL DROPS, REMARK 280 6.5 MG/ML PROTEIN, CRYSTAL ID 200083B12, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 125.58850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 45.66950 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 45.66950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 188.38275 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 45.66950 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 45.66950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 62.79425 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 45.66950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.66950 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 188.38275 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 45.66950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.66950 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 62.79425 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 125.58850 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 71 CG CD CE NZ REMARK 470 ARG B 74 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 420 CD
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 993 O HOH B 1229 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 168 40.99 -145.58 REMARK 500 ALA A 169 -127.28 50.70 REMARK 500 TYR A 230 -13.69 72.56 REMARK 500 ASP A 235 28.56 -144.98 REMARK 500 SER A 314 36.68 83.79 REMARK 500 LEU A 349 -113.35 50.93 REMARK 500 HIS A 389 -52.16 74.27 REMARK 500 SER A 419 -64.37 -109.05 REMARK 500 THR B 168 42.33 -146.41 REMARK 500 ALA B 169 -128.11 49.68 REMARK 500 TYR B 230 -12.42 73.17 REMARK 500 ASP B 235 27.63 -146.71 REMARK 500 SER B 314 34.97 82.58 REMARK 500 LEU B 349 -117.56 51.65 REMARK 500 HIS B 389 -53.51 74.59 REMARK 500 SER B 419 -60.43 -105.30 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1208 DISTANCE = 6.64 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 601 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 309 O REMARK 620 2 ASN A 309 OD1 77.4 REMARK 620 3 ALA A 310 O 73.0 75.3 REMARK 620 4 GLU A 356 OE1 157.4 82.8 91.7 REMARK 620 5 ASN A 402 O 93.5 167.2 93.6 104.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 601 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 309 O REMARK 620 2 ASN B 309 OD1 77.0 REMARK 620 3 ALA B 310 O 71.1 71.4 REMARK 620 4 GLU B 356 OE1 154.0 80.1 90.1 REMARK 620 5 SER B 401 OG 79.4 95.3 149.6 115.1 REMARK 620 6 ASN B 402 O 93.6 162.5 91.7 105.1 97.3 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 601 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B 601
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BAHEA.00113.B RELATED DB: TARGETDB
DBREF 3E60 A 1 420 UNP Q6G441 Q6G441_BARHE 1 420 DBREF 3E60 B 1 420 UNP Q6G441 Q6G441_BARHE 1 420
SEQADV 3E60 GLY A -3 UNP Q6G441 EXPRESSION TAG SEQADV 3E60 PRO A -2 UNP Q6G441 EXPRESSION TAG SEQADV 3E60 GLY A -1 UNP Q6G441 EXPRESSION TAG SEQADV 3E60 SER A 0 UNP Q6G441 EXPRESSION TAG SEQADV 3E60 GLY B -3 UNP Q6G441 EXPRESSION TAG SEQADV 3E60 PRO B -2 UNP Q6G441 EXPRESSION TAG SEQADV 3E60 GLY B -1 UNP Q6G441 EXPRESSION TAG SEQADV 3E60 SER B 0 UNP Q6G441 EXPRESSION TAG
SEQRES 1 A 424 GLY PRO GLY SER MET ARG ARG VAL VAL ILE THR GLY LEU SEQRES 2 A 424 GLY LEU VAL SER PRO LEU ALA GLY ASP VAL GLU TYR SER SEQRES 3 A 424 TRP LYS ARG LEU LEU GLU GLY LYS SER GLY VAL ARG ARG SEQRES 4 A 424 ILE THR GLU PHE ASP VAL SER ASP LEU SER CYS GLN ILE SEQRES 5 A 424 ALA ALA ARG ILE PRO VAL GLY ASP GLY THR ASN GLY THR SEQRES 6 A 424 TYR ASN ALA ASP LEU HIS MET GLU SER LYS GLU GLN ARG SEQRES 7 A 424 LYS VAL ASP ALA PHE ILE VAL TYR ALA ILE ALA ALA ALA SEQRES 8 A 424 ASP GLN ALA LEU ALA ASP ALA GLU TRP PHE PRO LYS SER SEQRES 9 A 424 ASP GLU ASP GLN ILE CYS THR GLY VAL LEU ILE GLY SER SEQRES 10 A 424 GLY ILE GLY GLY ILE GLU GLY ILE VAL GLU ALA GLY TYR SEQRES 11 A 424 THR LEU ARG ASP LYS GLY PRO ARG ARG ILE SER PRO PHE SEQRES 12 A 424 PHE ILE PRO GLY ARG LEU ILE ASN LEU ALA SER GLY TYR SEQRES 13 A 424 VAL SER ILE LYS TYR GLY LEU ARG GLY PRO ASN HIS SER SEQRES 14 A 424 VAL VAL THR ALA CYS SER THR GLY ALA HIS ALA ILE GLY SEQRES 15 A 424 ASP ALA ALA ARG LEU ILE ALA LEU GLY ASP ALA ASP VAL SEQRES 16 A 424 MET LEU ALA GLY GLY THR GLU SER PRO ILE ASN ARG ILE SEQRES 17 A 424 SER LEU ALA GLY PHE SER ALA CYS ARG ALA LEU SER THR SEQRES 18 A 424 CYS ARG ASN ASP ASP PRO GLU ARG ALA SER ARG PRO TYR SEQRES 19 A 424 ASP VAL ASP ARG ASP GLY PHE VAL MET GLY GLU GLY ALA SEQRES 20 A 424 ALA ILE VAL VAL LEU GLU GLU LEU GLU HIS ALA LYS LYS SEQRES 21 A 424 ARG GLY ALA ARG ILE TYR ALA GLU ILE ILE GLY TYR GLY SEQRES 22 A 424 LEU SER GLY ASP ALA TYR HIS ILE THR ALA PRO SER GLU SEQRES 23 A 424 SER GLY GLU GLY ALA GLN ARG SER MET MET ALA ALA LEU SEQRES 24 A 424 LYS ARG ALA GLN VAL ASN VAL SER GLU LEU ASP TYR ILE SEQRES 25 A 424 ASN ALA HIS GLY THR SER THR MET ALA ASP VAL ILE GLU SEQRES 26 A 424 LEU ALA ALA VAL GLU ARG VAL LEU GLY TYR TYR ALA PRO SEQRES 27 A 424 GLN VAL SER MET SER SER THR LYS SER SER ILE GLY HIS SEQRES 28 A 424 LEU LEU GLY ALA ALA GLY ALA ALA GLU ALA ILE PHE CYS SEQRES 29 A 424 VAL LEU ALA ILE ARG ASP ASN ILE ALA PRO ALA THR LEU SEQRES 30 A 424 ASN LEU GLU ASN PRO SER ILE GLU THR LYS ILE ASP LEU SEQRES 31 A 424 VAL PRO HIS LYS PRO ARG GLU ARG LYS ILE ASP THR VAL SEQRES 32 A 424 LEU SER ASN SER PHE GLY PHE GLY GLY THR ASN ALA SER SEQRES 33 A 424 LEU VAL MET ARG ARG PHE SER GLU SEQRES 1 B 424 GLY PRO GLY SER MET ARG ARG VAL VAL ILE THR GLY LEU SEQRES 2 B 424 GLY LEU VAL SER PRO LEU ALA GLY ASP VAL GLU TYR SER SEQRES 3 B 424 TRP LYS ARG LEU LEU GLU GLY LYS SER GLY VAL ARG ARG SEQRES 4 B 424 ILE THR GLU PHE ASP VAL SER ASP LEU SER CYS GLN ILE SEQRES 5 B 424 ALA ALA ARG ILE PRO VAL GLY ASP GLY THR ASN GLY THR SEQRES 6 B 424 TYR ASN ALA ASP LEU HIS MET GLU SER LYS GLU GLN ARG SEQRES 7 B 424 LYS VAL ASP ALA PHE ILE VAL TYR ALA ILE ALA ALA ALA SEQRES 8 B 424 ASP GLN ALA LEU ALA ASP ALA GLU TRP PHE PRO LYS SER SEQRES 9 B 424 ASP GLU ASP GLN ILE CYS THR GLY VAL LEU ILE GLY SER SEQRES 10 B 424 GLY ILE GLY GLY ILE GLU GLY ILE VAL GLU ALA GLY TYR SEQRES 11 B 424 THR LEU ARG ASP LYS GLY PRO ARG ARG ILE SER PRO PHE SEQRES 12 B 424 PHE ILE PRO GLY ARG LEU ILE ASN LEU ALA SER GLY TYR SEQRES 13 B 424 VAL SER ILE LYS TYR GLY LEU ARG GLY PRO ASN HIS SER SEQRES 14 B 424 VAL VAL THR ALA CYS SER THR GLY ALA HIS ALA ILE GLY SEQRES 15 B 424 ASP ALA ALA ARG LEU ILE ALA LEU GLY ASP ALA ASP VAL SEQRES 16 B 424 MET LEU ALA GLY GLY THR GLU SER PRO ILE ASN ARG ILE SEQRES 17 B 424 SER LEU ALA GLY PHE SER ALA CYS ARG ALA LEU SER THR SEQRES 18 B 424 CYS ARG ASN ASP ASP PRO GLU ARG ALA SER ARG PRO TYR SEQRES 19 B 424 ASP VAL ASP ARG ASP GLY PHE VAL MET GLY GLU GLY ALA SEQRES 20 B 424 ALA ILE VAL VAL LEU GLU GLU LEU GLU HIS ALA LYS LYS SEQRES 21 B 424 ARG GLY ALA ARG ILE TYR ALA GLU ILE ILE GLY TYR GLY SEQRES 22 B 424 LEU SER GLY ASP ALA TYR HIS ILE THR ALA PRO SER GLU SEQRES 23 B 424 SER GLY GLU GLY ALA GLN ARG SER MET MET ALA ALA LEU SEQRES 24 B 424 LYS ARG ALA GLN VAL ASN VAL SER GLU LEU ASP TYR ILE SEQRES 25 B 424 ASN ALA HIS GLY THR SER THR MET ALA ASP VAL ILE GLU SEQRES 26 B 424 LEU ALA ALA VAL GLU ARG VAL LEU GLY TYR TYR ALA PRO SEQRES 27 B 424 GLN VAL SER MET SER SER THR LYS SER SER ILE GLY HIS SEQRES 28 B 424 LEU LEU GLY ALA ALA GLY ALA ALA GLU ALA ILE PHE CYS SEQRES 29 B 424 VAL LEU ALA ILE ARG ASP ASN ILE ALA PRO ALA THR LEU SEQRES 30 B 424 ASN LEU GLU ASN PRO SER ILE GLU THR LYS ILE ASP LEU SEQRES 31 B 424 VAL PRO HIS LYS PRO ARG GLU ARG LYS ILE ASP THR VAL SEQRES 32 B 424 LEU SER ASN SER PHE GLY PHE GLY GLY THR ASN ALA SER SEQRES 33 B 424 LEU VAL MET ARG ARG PHE SER GLU
HET K A 601 1 HET K B 601 1
HETNAM K POTASSIUM ION
FORMUL 3 K 2(K 1+) FORMUL 5 HOH *779(H2 O)
HELIX 1 1 ASP A 18 GLU A 28 1 11 HELIX 2 2 ASN A 63 HIS A 67 5 5 HELIX 3 3 GLU A 69 ARG A 74 1 6 HELIX 4 4 ASP A 77 GLU A 95 1 19 HELIX 5 5 SER A 100 CYS A 106 1 7 HELIX 6 6 GLY A 117 GLY A 132 1 16 HELIX 7 7 PRO A 133 ILE A 136 5 4 HELIX 8 8 ASN A 147 GLY A 158 1 12 HELIX 9 9 THR A 168 CYS A 170 5 3 HELIX 10 10 SER A 171 LEU A 186 1 16 HELIX 11 11 ASN A 202 CYS A 212 1 11 HELIX 12 12 ASP A 222 ALA A 226 5 5 HELIX 13 13 LEU A 251 ARG A 257 1 7 HELIX 14 14 GLY A 284 GLN A 299 1 16 HELIX 15 15 ASN A 301 LEU A 305 5 5 HELIX 16 16 ALA A 317 GLY A 330 1 14 HELIX 17 17 TYR A 331 VAL A 336 5 6 HELIX 18 18 THR A 341 GLY A 346 1 6 HELIX 19 19 LEU A 348 GLY A 350 5 3 HELIX 20 20 ALA A 351 ASN A 367 1 17 HELIX 21 21 ASP B 18 GLU B 28 1 11 HELIX 22 22 ASN B 63 HIS B 67 5 5 HELIX 23 23 GLU B 69 ARG B 74 1 6 HELIX 24 24 ASP B 77 GLU B 95 1 19 HELIX 25 25 SER B 100 CYS B 106 1 7 HELIX 26 26 GLY B 117 LYS B 131 1 15 HELIX 27 27 GLY B 132 ILE B 136 5 5 HELIX 28 28 ASN B 147 GLY B 158 1 12 HELIX 29 29 THR B 168 CYS B 170 5 3 HELIX 30 30 SER B 171 LEU B 186 1 16 HELIX 31 31 ASN B 202 CYS B 212 1 11 HELIX 32 32 ASP B 222 ALA B 226 5 5 HELIX 33 33 LEU B 251 ARG B 257 1 7 HELIX 34 34 GLY B 284 GLN B 299 1 16 HELIX 35 35 ASN B 301 LEU B 305 5 5 HELIX 36 36 ALA B 317 GLY B 330 1 14 HELIX 37 37 TYR B 331 VAL B 336 5 6 HELIX 38 38 THR B 341 GLY B 346 1 6 HELIX 39 39 LEU B 348 GLY B 350 5 3 HELIX 40 40 ALA B 351 ASN B 367 1 17
SHEET 1 A10 ASN A 163 HIS A 164 0 SHEET 2 A10 THR A 107 GLY A 112 1 N VAL A 109 O HIS A 164 SHEET 3 A10 VAL A 191 GLU A 198 1 O LEU A 193 N LEU A 110 SHEET 4 A10 GLY A 242 GLU A 250 -1 O LEU A 248 N MET A 192 SHEET 5 A10 VAL A 4 VAL A 12 -1 N VAL A 12 O ALA A 243 SHEET 6 A10 ALA A 263 GLY A 272 -1 O ALA A 263 N ILE A 6 SHEET 7 A10 THR A 409 ARG A 416 -1 O ARG A 416 N GLU A 264 SHEET 8 A10 THR A 398 GLY A 405 -1 N GLY A 405 O THR A 409 SHEET 9 A10 TYR A 307 ASN A 309 1 N ASN A 309 O LEU A 400 SHEET 10 A10 SER A 337 SER A 339 1 O SER A 337 N ILE A 308 SHEET 1 B 2 VAL A 33 ARG A 35 0 SHEET 2 B 2 ILE A 48 ALA A 50 -1 O ALA A 49 N ARG A 34 SHEET 1 C 2 ILE A 368 ALA A 369 0 SHEET 2 C 2 ARG A 392 GLU A 393 -1 O ARG A 392 N ALA A 369 SHEET 1 D10 ASN B 163 HIS B 164 0 SHEET 2 D10 THR B 107 GLY B 112 1 N VAL B 109 O HIS B 164 SHEET 3 D10 VAL B 191 GLU B 198 1 O LEU B 193 N LEU B 110 SHEET 4 D10 GLY B 242 GLU B 250 -1 O LEU B 248 N MET B 192 SHEET 5 D10 VAL B 4 VAL B 12 -1 N VAL B 5 O GLU B 249 SHEET 6 D10 ALA B 263 GLY B 272 -1 O ALA B 263 N ILE B 6 SHEET 7 D10 THR B 409 ARG B 416 -1 O ARG B 416 N GLU B 264 SHEET 8 D10 THR B 398 GLY B 405 -1 N GLY B 405 O THR B 409 SHEET 9 D10 TYR B 307 ASN B 309 1 N ASN B 309 O LEU B 400 SHEET 10 D10 SER B 337 SER B 339 1 O SER B 337 N ILE B 308 SHEET 1 E 2 VAL B 33 ARG B 35 0 SHEET 2 E 2 ILE B 48 ALA B 50 -1 O ALA B 49 N ARG B 34 SHEET 1 F 2 ILE B 368 ALA B 369 0 SHEET 2 F 2 ARG B 392 GLU B 393 -1 O ARG B 392 N ALA B 369
LINK O ASN A 309 K K A 601 1555 1555 2.77 LINK OD1 ASN A 309 K K A 601 1555 1555 2.54 LINK O ALA A 310 K K A 601 1555 1555 2.84 LINK OE1 GLU A 356 K K A 601 1555 1555 2.51 LINK O ASN A 402 K K A 601 1555 1555 2.63 LINK O ASN B 309 K K B 601 1555 1555 2.80 LINK OD1 ASN B 309 K K B 601 1555 1555 2.62 LINK O ALA B 310 K K B 601 1555 1555 2.94 LINK OE1 GLU B 356 K K B 601 1555 1555 2.60 LINK OG SER B 401 K K B 601 1555 1555 2.92 LINK O ASN B 402 K K B 601 1555 1555 2.68
SITE 1 AC1 5 ASN A 309 ALA A 310 GLU A 356 SER A 401 SITE 2 AC1 5 ASN A 402 SITE 1 AC2 5 ASN B 309 ALA B 310 GLU B 356 SER B 401 SITE 2 AC2 5 ASN B 402
CRYST1 91.339 91.339 251.177 90.00 90.00 90.00 P 43 21 2 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.010948 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010948 0.000000 0.00000
SCALE3 0.000000 0.000000 0.003981 0.00000