10 20 30 40 50 60 70 80 3DA1 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 28-MAY-08 3DA1
TITLE X-RAY STRUCTURE OF THE GLYCEROL-3-PHOSPHATE DEHYDROGENASE TITLE 2 FROM BACILLUS HALODURANS COMPLEXED WITH FAD. NORTHEAST TITLE 3 STRUCTURAL GENOMICS CONSORTIUM TARGET BHR167.
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCEROL-3-PHOSPHATE DEHYDROGENASE; COMPND 3 CHAIN: A
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS HALODURANS
KEYWDS NESG BHR167 Q9KDW6 X-RAY, STRUCTURAL GENOMICS, PSI-2, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR A.P.KUZIN,M.ABASHIDZE,J.SEETHARAMAN,D.WANG,H.JANJUA,L.OWENS, AUTHOR 2 R.XIAO,R.NAIR,M.C.BARAN,T.B.ACTON,B.ROST,G.T.MONTELIONE, AUTHOR 3 J.F.HUNT,L.TONG,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM AUTHOR 4 (NESG)
REVDAT 2 24-FEB-09 3DA1 1 VERSN REVDAT 1 29-JUL-08 3DA1 0
JRNL AUTH A.P.KUZIN,M.ABASHIDZE,J.SEETHARAMAN,D.WANG, JRNL AUTH 2 H.JANJUA,L.OWENS,R.XIAO,R.NAIR,M.C.BARAN,T.B.ACTON, JRNL AUTH 3 B.ROST,G.T.MONTELIONE,J.F.HUNT,L.TONG JRNL TITL X-RAY STRUCTURE OF THE GLYCEROL-3-PHOSPHATE JRNL TITL 2 DEHYDROGENASE FROM BACILLUS HALODURANS COMPLEXED JRNL TITL 3 WITH FAD. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM JRNL TITL 4 TARGET BHR167. JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.74 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 325742.730 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 83.0 REMARK 3 NUMBER OF REFLECTIONS : 25498 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1283 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 57.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2814 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 153 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.027 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3916 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 53 REMARK 3 SOLVENT ATOMS : 36 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 4.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 25.35000 REMARK 3 B22 (A**2) : -10.16000 REMARK 3 B33 (A**2) : -15.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.41 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.46 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.48 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.70 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.85 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.310 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.250 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.120 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.230 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.40 REMARK 3 BSOL : 35.68 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER.PARAM REMARK 3 PARAMETER FILE 3 : FAD.PAR REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : FAD.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED
REMARK 4 REMARK 4 3DA1 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-08. REMARK 100 THE RCSB ID CODE IS RCSB047780.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30290 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 16.800 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.34400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SNB REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM NACL, 100 MM MOPS, 18% REMARK 280 PEG3350, PH 7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 113.02850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 113.02850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.38350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.47650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.38350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.47650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 113.02850 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.38350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.47650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 113.02850 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.38350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.47650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 67 REMARK 465 LEU A 68 REMARK 465 ARG A 69 REMARK 465 TYR A 70 REMARK 465 LEU A 71 REMARK 465 LYS A 72 REMARK 465 GLN A 73 REMARK 465 PHE A 74 REMARK 465 GLU A 75 REMARK 465 ILE A 76 REMARK 465 LYS A 77 REMARK 465 LEU A 78 REMARK 465 VAL A 79 REMARK 465 ALA A 80 REMARK 465 GLU A 81 REMARK 465 ASP A 109 REMARK 465 GLY A 110 REMARK 465 THR A 111 REMARK 465 PHE A 112 REMARK 465 GLY A 113 REMARK 465 LYS A 114 REMARK 465 PHE A 115 REMARK 465 SER A 116 REMARK 465 THR A 117 REMARK 465 SER A 118 REMARK 465 LEU A 119 REMARK 465 GLY A 120 REMARK 465 LEU A 121 REMARK 465 LYS A 122 REMARK 465 VAL A 123 REMARK 465 TYR A 124 REMARK 465 ASP A 125 REMARK 465 TYR A 126 REMARK 465 LEU A 127 REMARK 465 ALA A 128 REMARK 465 ASP A 129 REMARK 465 VAL A 130 REMARK 465 ARG A 131 REMARK 465 LYS A 132 REMARK 465 ASP A 133 REMARK 465 GLU A 134 REMARK 465 ARG A 135 REMARK 465 GLU A 346 REMARK 465 GLY A 347 REMARK 465 LYS A 348 REMARK 465 LYS A 349 REMARK 465 ALA A 350 REMARK 465 SER A 351 REMARK 465 GLU A 352 REMARK 465 ILE A 353 REMARK 465 SER A 354 REMARK 465 ARG A 355 REMARK 465 LYS A 356 REMARK 465 PRO A 550 REMARK 465 THR A 551 REMARK 465 THR A 552 REMARK 465 VAL A 553 REMARK 465 LEU A 554 REMARK 465 GLU A 555 REMARK 465 HIS A 556 REMARK 465 HIS A 557 REMARK 465 HIS A 558 REMARK 465 HIS A 559 REMARK 465 HIS A 560 REMARK 465 HIS A 561
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 16 -63.34 -125.72 REMARK 500 GLN A 43 104.87 -54.97 REMARK 500 ALA A 93 72.28 -160.84 REMARK 500 ASP A 210 99.04 -69.35 REMARK 500 ASP A 214 -0.82 80.09 REMARK 500 ALA A 227 56.14 -108.05 REMARK 500 PRO A 230 1.97 -68.07 REMARK 500 SER A 241 13.05 -145.44 REMARK 500 PHE A 262 73.70 -158.91 REMARK 500 ASP A 271 -169.13 -78.87 REMARK 500 GLU A 273 -81.15 -58.88 REMARK 500 SER A 274 -79.06 -87.83 REMARK 500 ASP A 275 -78.56 9.68 REMARK 500 GLU A 285 46.54 39.97 REMARK 500 ASP A 298 35.71 -145.79 REMARK 500 LYS A 299 -135.54 -101.20 REMARK 500 ARG A 326 53.84 -115.20 REMARK 500 LEU A 327 109.93 -52.27 REMARK 500 LEU A 374 -60.78 -100.83 REMARK 500 ASN A 393 88.94 55.34 REMARK 500 SER A 446 -16.43 -49.40 REMARK 500 ASN A 447 4.46 -69.11 REMARK 500 ASN A 501 47.36 -162.25 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 609
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BHR167 RELATED DB: TARGETDB
DBREF 3DA1 A 1 561 PDB 3DA1 3DA1 1 561
SEQRES 1 A 561 MSE PHE SER ALA LYS LYS ARG ASP LYS CYS ILE GLY GLU SEQRES 2 A 561 MSE SER GLU LYS GLN LEU ASP LEU LEU VAL ILE GLY GLY SEQRES 3 A 561 GLY ILE THR GLY ALA GLY ILE ALA LEU ASP ALA GLN VAL SEQRES 4 A 561 ARG GLY ILE GLN THR GLY LEU VAL GLU MSE ASN ASP PHE SEQRES 5 A 561 ALA SER GLY THR SER SER ARG SER THR LYS LEU VAL HIS SEQRES 6 A 561 GLY GLY LEU ARG TYR LEU LYS GLN PHE GLU ILE LYS LEU SEQRES 7 A 561 VAL ALA GLU VAL GLY LYS GLU ARG ALA ILE VAL TYR GLU SEQRES 8 A 561 ASN ALA PRO HIS VAL THR THR PRO GLU TRP MSE LEU LEU SEQRES 9 A 561 PRO ILE PHE LYS ASP GLY THR PHE GLY LYS PHE SER THR SEQRES 10 A 561 SER LEU GLY LEU LYS VAL TYR ASP TYR LEU ALA ASP VAL SEQRES 11 A 561 ARG LYS ASP GLU ARG ARG TYR MSE LEU ASN GLU LYS GLN SEQRES 12 A 561 THR LEU GLU LYS GLU PRO LEU LEU ARG LYS GLU ASN LEU SEQRES 13 A 561 LYS GLY GLY GLY ILE TYR VAL GLU TYR ARG THR ASP ASP SEQRES 14 A 561 ALA ARG LEU THR LEU GLU ILE MSE LYS GLU ALA VAL ALA SEQRES 15 A 561 ARG GLY ALA VAL ALA LEU ASN TYR MSE LYS VAL GLU SER SEQRES 16 A 561 PHE ILE TYR ASP GLN GLY LYS VAL VAL GLY VAL VAL ALA SEQRES 17 A 561 LYS ASP ARG LEU THR ASP THR THR HIS THR ILE TYR ALA SEQRES 18 A 561 LYS LYS VAL VAL ASN ALA ALA GLY PRO TRP VAL ASP THR SEQRES 19 A 561 LEU ARG GLU LYS ASP ARG SER LYS HIS GLY LYS TYR LEU SEQRES 20 A 561 LYS LEU SER LYS GLY VAL HIS LEU VAL VAL ASP GLN SER SEQRES 21 A 561 ARG PHE PRO LEU ARG GLN ALA VAL TYR PHE ASP THR GLU SEQRES 22 A 561 SER ASP GLY ARG MSE ILE PHE ALA ILE PRO ARG GLU GLY SEQRES 23 A 561 LYS THR TYR ILE GLY THR THR ASP THR PHE TYR ASP LYS SEQRES 24 A 561 ASP ILE ALA SER PRO ARG MSE THR VAL GLU ASP ARG ASP SEQRES 25 A 561 TYR ILE LEU ALA ALA ALA ASN TYR MSE PHE PRO SER LEU SEQRES 26 A 561 ARG LEU THR ALA ASP ASP VAL GLU SER SER TRP ALA GLY SEQRES 27 A 561 LEU ARG PRO LEU ILE HIS GLU GLU GLY LYS LYS ALA SER SEQRES 28 A 561 GLU ILE SER ARG LYS ASP GLU ILE PHE PHE SER ASP SER SEQRES 29 A 561 GLY LEU ILE SER ILE ALA GLY GLY LYS LEU THR GLY TYR SEQRES 30 A 561 ARG LYS MSE ALA GLU ARG THR VAL ASP ALA VAL ALA GLN SEQRES 31 A 561 GLY LEU ASN VAL ASN GLU PRO CYS THR THR ALA ALA ILE SEQRES 32 A 561 ARG LEU SER GLY GLY LEU ALA GLU GLY ALA GLN GLY PHE SEQRES 33 A 561 PRO ARG PHE LEU ASP GLU ALA SER ARG LYS GLY ALA LYS SEQRES 34 A 561 LEU GLY PHE ASP ALA ASP GLU VAL ARG ARG LEU ALA LYS SEQRES 35 A 561 LEU TYR GLY SER ASN VAL ASP HIS VAL LEU ASN TYR ALA SEQRES 36 A 561 TYR GLU GLY LYS GLU GLU ALA GLU HIS TYR GLY LEU PRO SEQRES 37 A 561 ALA LEU LEU LEU GLY GLN LEU GLN TYR GLY VAL GLU GLN SEQRES 38 A 561 GLU MSE VAL ALA THR PRO LEU ASP PHE PHE VAL ARG ARG SEQRES 39 A 561 THR GLY ALA LEU PHE PHE ASN ILE SER LEU VAL HIS GLN SEQRES 40 A 561 TRP LYS GLU ALA VAL LEU ARG TRP MSE ALA GLU GLU PHE SEQRES 41 A 561 SER TRP THR GLU GLU GLU LYS THR ARG PHE GLN ASN GLU SEQRES 42 A 561 LEU GLU THR GLU LEU LYS MSE ALA VAL ASP PRO LEU PHE SEQRES 43 A 561 GLN VAL GLU PRO THR THR VAL LEU GLU HIS HIS HIS HIS SEQRES 44 A 561 HIS HIS
MODRES 3DA1 MSE A 1 MET SELENOMETHIONINE MODRES 3DA1 MSE A 14 MET SELENOMETHIONINE MODRES 3DA1 MSE A 49 MET SELENOMETHIONINE MODRES 3DA1 MSE A 102 MET SELENOMETHIONINE MODRES 3DA1 MSE A 138 MET SELENOMETHIONINE MODRES 3DA1 MSE A 177 MET SELENOMETHIONINE MODRES 3DA1 MSE A 191 MET SELENOMETHIONINE MODRES 3DA1 MSE A 278 MET SELENOMETHIONINE MODRES 3DA1 MSE A 306 MET SELENOMETHIONINE MODRES 3DA1 MSE A 321 MET SELENOMETHIONINE MODRES 3DA1 MSE A 380 MET SELENOMETHIONINE MODRES 3DA1 MSE A 483 MET SELENOMETHIONINE MODRES 3DA1 MSE A 516 MET SELENOMETHIONINE MODRES 3DA1 MSE A 540 MET SELENOMETHIONINE
HET MSE A 1 8 HET MSE A 14 8 HET MSE A 49 8 HET MSE A 102 8 HET MSE A 138 8 HET MSE A 177 8 HET MSE A 191 8 HET MSE A 278 8 HET MSE A 306 8 HET MSE A 321 8 HET MSE A 380 8 HET MSE A 483 8 HET MSE A 516 8 HET MSE A 540 8 HET FAD A 609 53
HETNAM MSE SELENOMETHIONINE HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE
FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 HOH *36(H2 O)
HELIX 1 1 LYS A 6 SER A 15 1 10 HELIX 2 2 GLY A 27 VAL A 39 1 13 HELIX 3 3 GLY A 55 ARG A 59 5 5 HELIX 4 4 VAL A 82 ALA A 93 1 12 HELIX 5 5 ASN A 140 GLU A 148 1 9 HELIX 6 6 ASP A 168 ARG A 183 1 16 HELIX 7 7 ALA A 228 PRO A 230 5 3 HELIX 8 8 TRP A 231 LYS A 238 1 8 HELIX 9 9 SER A 260 PHE A 262 5 3 HELIX 10 10 THR A 307 PHE A 322 1 16 HELIX 11 11 GLY A 376 ASN A 393 1 18 HELIX 12 12 GLY A 415 LYS A 429 1 15 HELIX 13 13 ASP A 433 GLY A 445 1 13 HELIX 14 14 ASN A 447 GLY A 458 1 12 HELIX 15 15 GLY A 458 TYR A 465 1 8 HELIX 16 16 PRO A 468 GLU A 482 1 15 HELIX 17 17 THR A 486 ARG A 493 1 8 HELIX 18 18 GLY A 496 ASN A 501 1 6 HELIX 19 19 ASN A 501 PHE A 520 1 20 HELIX 20 20 THR A 523 ASP A 543 1 21
SHEET 1 A 6 VAL A 186 ASN A 189 0 SHEET 2 A 6 THR A 44 GLU A 48 1 N GLU A 48 O LEU A 188 SHEET 3 A 6 LEU A 19 ILE A 24 1 N LEU A 21 O GLY A 45 SHEET 4 A 6 THR A 216 ASN A 226 1 O LYS A 222 N LEU A 19 SHEET 5 A 6 LYS A 202 ASP A 210 -1 N VAL A 204 O ALA A 221 SHEET 6 A 6 MSE A 191 ASP A 199 -1 N ILE A 197 O GLY A 205 SHEET 1 B 6 VAL A 186 ASN A 189 0 SHEET 2 B 6 THR A 44 GLU A 48 1 N GLU A 48 O LEU A 188 SHEET 3 B 6 LEU A 19 ILE A 24 1 N LEU A 21 O GLY A 45 SHEET 4 B 6 THR A 216 ASN A 226 1 O LYS A 222 N LEU A 19 SHEET 5 B 6 ILE A 367 ILE A 369 1 O ILE A 367 N ASN A 226 SHEET 6 B 6 ILE A 359 PHE A 361 -1 N PHE A 360 O SER A 368 SHEET 1 C 8 LEU A 63 VAL A 64 0 SHEET 2 C 8 GLY A 158 ARG A 166 -1 O TYR A 165 N VAL A 64 SHEET 3 C 8 THR A 98 ILE A 106 -1 N MSE A 102 O TYR A 162 SHEET 4 C 8 ALA A 267 PHE A 270 1 O TYR A 269 N LEU A 103 SHEET 5 C 8 ILE A 279 ARG A 284 -1 O ILE A 279 N PHE A 270 SHEET 6 C 8 LYS A 287 ILE A 290 -1 O LYS A 287 N ARG A 284 SHEET 7 C 8 TYR A 246 ASP A 258 -1 N VAL A 257 O THR A 288 SHEET 8 C 8 THR A 295 TYR A 297 -1 O THR A 295 N LYS A 251 SHEET 1 D 8 TYR A 137 LEU A 139 0 SHEET 2 D 8 GLY A 158 ARG A 166 -1 O GLY A 159 N LEU A 139 SHEET 3 D 8 THR A 98 ILE A 106 -1 N MSE A 102 O TYR A 162 SHEET 4 D 8 ALA A 267 PHE A 270 1 O TYR A 269 N LEU A 103 SHEET 5 D 8 ILE A 279 ARG A 284 -1 O ILE A 279 N PHE A 270 SHEET 6 D 8 LYS A 287 ILE A 290 -1 O LYS A 287 N ARG A 284 SHEET 7 D 8 TYR A 246 ASP A 258 -1 N VAL A 257 O THR A 288 SHEET 8 D 8 VAL A 332 HIS A 344 -1 O GLU A 333 N VAL A 256
LINK C MSE A 1 N PHE A 2 1555 1555 1.33 LINK C GLU A 13 N MSE A 14 1555 1555 1.33 LINK C MSE A 14 N SER A 15 1555 1555 1.33 LINK C GLU A 48 N MSE A 49 1555 1555 1.33 LINK C MSE A 49 N ASN A 50 1555 1555 1.33 LINK C TRP A 101 N MSE A 102 1555 1555 1.33 LINK C MSE A 102 N LEU A 103 1555 1555 1.33 LINK C TYR A 137 N MSE A 138 1555 1555 1.33 LINK C MSE A 138 N LEU A 139 1555 1555 1.33 LINK C ILE A 176 N MSE A 177 1555 1555 1.33 LINK C MSE A 177 N LYS A 178 1555 1555 1.33 LINK C TYR A 190 N MSE A 191 1555 1555 1.33 LINK C MSE A 191 N LYS A 192 1555 1555 1.33 LINK C ARG A 277 N MSE A 278 1555 1555 1.33 LINK C MSE A 278 N ILE A 279 1555 1555 1.33 LINK C ARG A 305 N MSE A 306 1555 1555 1.33 LINK C MSE A 306 N THR A 307 1555 1555 1.33 LINK C TYR A 320 N MSE A 321 1555 1555 1.33 LINK C MSE A 321 N PHE A 322 1555 1555 1.33 LINK C LYS A 379 N MSE A 380 1555 1555 1.33 LINK C MSE A 380 N ALA A 381 1555 1555 1.33 LINK C GLU A 482 N MSE A 483 1555 1555 1.33 LINK C MSE A 483 N VAL A 484 1555 1555 1.33 LINK C TRP A 515 N MSE A 516 1555 1555 1.33 LINK C MSE A 516 N ALA A 517 1555 1555 1.33 LINK C LYS A 539 N MSE A 540 1555 1555 1.32 LINK C MSE A 540 N ALA A 541 1555 1555 1.33
SITE 1 AC1 30 ILE A 24 GLY A 27 ILE A 28 THR A 29 SITE 2 AC1 30 GLU A 48 ASN A 50 ASP A 51 SER A 54 SITE 3 AC1 30 GLY A 55 THR A 56 SER A 57 SER A 60 SITE 4 AC1 30 THR A 61 LEU A 63 HIS A 65 GLY A 229 SITE 5 AC1 30 PRO A 230 TRP A 231 LEU A 235 GLY A 252 SITE 6 AC1 30 HIS A 254 THR A 292 GLY A 338 ARG A 340 SITE 7 AC1 30 GLY A 372 LYS A 373 LEU A 374 THR A 375 SITE 8 AC1 30 HOH A 613 HOH A 635
CRYST1 52.767 96.953 226.057 90.00 90.00 90.00 C 2 2 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.018951 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010314 0.000000 0.00000
SCALE3 0.000000 0.000000 0.004424 0.00000