10 20 30 40 50 60 70 80 3D9D - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 27-MAY-08 3D9D
TITLE NITROALKANE OXIDASE: MUTANT D402N CRYSTALLIZED WITH 1-NITROHEXANE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITROALKANE OXIDASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 1.7.3.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FUSARIUM OXYSPORUM; SOURCE 3 ORGANISM_TAXID: 5507; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PETNAO4
KEYWDS OXIDOREDUCTASE FLAVOENZYME, NITROALKANE, ACYL-COA DEHYDROGENASE, LONG KEYWDS 2 CELL EDGE, FAD, INHIBITOR, FLAVOPROTEIN, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR A.HEROUX,D.M.BOZINOVSKI,M.P.VALLEY,P.F.FITZPATRICK,A.M.ORVILLE
REVDAT 3 23-APR-14 3D9D 1 JRNL REVDAT 2 13-JUL-11 3D9D 1 VERSN REVDAT 1 07-APR-09 3D9D 0
JRNL AUTH A.HEROUX,D.M.BOZINOVSKI,M.P.VALLEY,P.F.FITZPATRICK, JRNL AUTH 2 A.M.ORVILLE JRNL TITL CRYSTAL STRUCTURES OF INTERMEDIATES IN THE NITROALKANE JRNL TITL 2 OXIDASE REACTION. JRNL REF BIOCHEMISTRY V. 48 3407 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19265437 JRNL DOI 10.1021/BI8023042
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.NAGPAL,M.P.VALLEY,P.F.FITZPATRICK,A.M.ORVILLE REMARK 1 TITL CRYSTAL STRUCTURES OF NITROALKANE OXIDASE: INSIGHTS INTO THE REMARK 1 TITL 2 REACTION MECHANISM FROM A COVALENT COMPLEX OF THE REMARK 1 TITL 3 FLAVOENZYME TRAPPED DURING TURNOVER. REMARK 1 REF BIOCHEMISTRY V. 45 1138 2006 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 16430210 REMARK 1 DOI 10.1021/BI051966W REMARK 1 REFERENCE 2 REMARK 1 AUTH P.F.FITZPATRICK,D.M.BOZINOVSKI,A.HEROUX,P.G.SHAW,M.P.VALLEY, REMARK 1 AUTH 2 A.M.ORVILLE REMARK 1 TITL MECHANISTIC AND STRUCTURAL ANALYSES OF THE ROLES OF ARG409 REMARK 1 TITL 2 AND ASP402 IN THE REACTION OF THE FLAVOPROTEIN NITROALKANE REMARK 1 TITL 3 OXIDASE. REMARK 1 REF BIOCHEMISTRY V. 46 13800 2007 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 17994768 REMARK 1 DOI 10.1021/BI701557K
REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 3 NUMBER OF REFLECTIONS : 123030 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6169 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5419 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 58.18 REMARK 3 BIN R VALUE (WORKING SET) : 0.2670 REMARK 3 BIN FREE R VALUE SET COUNT : 273 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 13219 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 296 REMARK 3 SOLVENT ATOMS : 650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.31000 REMARK 3 B22 (A**2) : 0.31000 REMARK 3 B33 (A**2) : -0.46000 REMARK 3 B12 (A**2) : 0.15000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.192 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.167 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.115 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.337 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 13799 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 18747 ; 1.525 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1720 ; 5.454 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 548 ;39.101 ;24.453 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2315 ;16.079 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 72 ;18.290 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2124 ; 0.138 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 10204 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 6959 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 9475 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 834 ; 0.128 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 46 ; 0.282 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.428 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 8875 ; 1.158 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 13834 ; 1.292 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5660 ; 2.362 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4913 ; 3.635 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 3D9D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-MAY-08. REMARK 100 THE RCSB ID CODE IS RCSB047756.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100.000000 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 391270 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : 0.08900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.7200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 62.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : 0.44700 REMARK 200 R SYM FOR SHELL (I) : 0.44700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLREP REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2C12 REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-30MM PEG 3350, 20-35% GLYCEROL, REMARK 280 0.1M NACACODYLATE, PH 7.50, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 225.62800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 112.81400 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 112.81400 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 225.62800 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 28150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 53630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -146.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 434 REMARK 465 ASP A 435 REMARK 465 LYS A 436 REMARK 465 SER A 437 REMARK 465 ARG A 438 REMARK 465 LEU A 439 REMARK 465 LYS B 433 REMARK 465 VAL B 434 REMARK 465 ASP B 435 REMARK 465 LYS B 436 REMARK 465 SER B 437 REMARK 465 ARG B 438 REMARK 465 LEU B 439 REMARK 465 SER C 432 REMARK 465 LYS C 433 REMARK 465 VAL C 434 REMARK 465 ASP C 435 REMARK 465 LYS C 436 REMARK 465 SER C 437 REMARK 465 ARG C 438 REMARK 465 LEU C 439 REMARK 465 LYS D 433 REMARK 465 VAL D 434 REMARK 465 ASP D 435 REMARK 465 LYS D 436 REMARK 465 SER D 437 REMARK 465 ARG D 438 REMARK 465 LEU D 439
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 415 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 433 CG CD CE NZ REMARK 470 SER B 195 OG REMARK 470 LYS B 196 CG CD CE NZ REMARK 470 ARG B 415 CG CD NE CZ NH1 NH2 REMARK 470 SER B 431 OG REMARK 470 SER B 432 OG REMARK 470 ARG C 415 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 415 CG CD NE CZ NH1 NH2 REMARK 470 SER D 432 OG
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 328 O HOH A 857 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU C 114 O HOH C 840 6554 1.71 REMARK 500 OD2 ASP C 108 NZ LYS C 264 6554 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 331 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG B 331 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 86 -50.19 -120.36 REMARK 500 GLU A 87 107.95 -164.02 REMARK 500 THR A 90 -48.23 70.49 REMARK 500 TRP A 169 -22.35 91.41 REMARK 500 ASN A 172 -2.19 72.25 REMARK 500 LEU A 408 -63.50 -107.32 REMARK 500 VAL B 24 -65.56 -99.26 REMARK 500 GLU B 87 110.15 -165.36 REMARK 500 THR B 90 -45.77 70.50 REMARK 500 ASP B 108 57.68 -105.40 REMARK 500 TRP B 169 -25.55 97.64 REMARK 500 ASN B 172 -2.00 76.24 REMARK 500 LEU B 408 -62.92 -108.09 REMARK 500 GLU C 87 109.47 -162.39 REMARK 500 THR C 90 -50.77 69.75 REMARK 500 ASP C 108 58.68 -106.94 REMARK 500 TRP C 169 -22.63 93.10 REMARK 500 ASN C 172 -6.87 70.70 REMARK 500 PRO C 194 4.83 -65.55 REMARK 500 ASN C 402 50.36 37.16 REMARK 500 LEU C 408 -60.34 -106.01 REMARK 500 GLU D 87 109.48 -163.21 REMARK 500 THR D 90 -45.61 68.50 REMARK 500 TRP D 169 -22.14 94.38 REMARK 500 ASN D 172 -1.85 74.73 REMARK 500 ASN D 402 52.80 39.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASP C 108 6.3 L L EXPECTING SP3 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE N6C A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE N6C B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD C 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE N6C C 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD D 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE N6C D 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 701
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2C12 RELATED DB: PDB REMARK 900 SAME PROTEIN: NITROALKANE OXIDASE IN COMPLEX WITH SPERMINE, REMARK 900 A COMPETITIVE INHIBITOR REMARK 900 RELATED ID: 2C0U RELATED DB: PDB REMARK 900 SAME PROTEIN: NITROALKANE OXIDASE TRAPPED DURING SUBSTRATE REMARK 900 TURNOVER REMARK 900 RELATED ID: 2REH RELATED DB: PDB REMARK 900 SAME PROTEIN; NITROALKANE OXIDASE ACTIVE SITE MUTANT REMARK 900 RELATED ID: 2ZAF RELATED DB: PDB REMARK 900 SAME PROTEIN; NITROALKANE OXIDASE ACTIVE SITE MUTANT REMARK 900 RELATED ID: 3D9E RELATED DB: PDB REMARK 900 RELATED ID: 3D9F RELATED DB: PDB REMARK 900 RELATED ID: 3D9G RELATED DB: PDB
DBREF 3D9D A 2 439 UNP Q8X1D8 Q8X1D8_FUSOX 2 439 DBREF 3D9D B 2 439 UNP Q8X1D8 Q8X1D8_FUSOX 2 439 DBREF 3D9D C 2 439 UNP Q8X1D8 Q8X1D8_FUSOX 2 439 DBREF 3D9D D 2 439 UNP Q8X1D8 Q8X1D8_FUSOX 2 439
SEQADV 3D9D ASN A 402 UNP Q8X1D8 ASP 402 ENGINEERED SEQADV 3D9D ASN B 402 UNP Q8X1D8 ASP 402 ENGINEERED SEQADV 3D9D ASN C 402 UNP Q8X1D8 ASP 402 ENGINEERED SEQADV 3D9D ASN D 402 UNP Q8X1D8 ASP 402 ENGINEERED
SEQRES 1 A 438 VAL ASP PHE LYS LEU SER PRO SER GLN LEU GLU ALA ARG SEQRES 2 A 438 ARG HIS ALA GLN ALA PHE ALA ASN THR VAL LEU THR LYS SEQRES 3 A 438 ALA SER ALA GLU TYR SER THR GLN LYS ASP GLN LEU SER SEQRES 4 A 438 ARG PHE GLN ALA THR ARG PRO PHE TYR ARG GLU ALA VAL SEQRES 5 A 438 ARG HIS GLY LEU ILE LYS ALA GLN VAL PRO ILE PRO LEU SEQRES 6 A 438 GLY GLY THR MET GLU SER LEU VAL HIS GLU SER ILE ILE SEQRES 7 A 438 LEU GLU GLU LEU PHE ALA VAL GLU PRO ALA THR SER ILE SEQRES 8 A 438 THR ILE VAL ALA THR ALA LEU GLY LEU MET PRO VAL ILE SEQRES 9 A 438 LEU CYS ASP SER PRO SER LEU GLN GLU LYS PHE LEU LYS SEQRES 10 A 438 PRO PHE ILE SER GLY GLU GLY GLU PRO LEU ALA SER LEU SEQRES 11 A 438 MET HIS SER GLU PRO ASN GLY THR ALA ASN TRP LEU GLN SEQRES 12 A 438 LYS GLY GLY PRO GLY LEU GLN THR THR ALA ARG LYS VAL SEQRES 13 A 438 GLY ASN GLU TRP VAL ILE SER GLY GLU LYS LEU TRP PRO SEQRES 14 A 438 SER ASN SER GLY GLY TRP ASP TYR LYS GLY ALA ASP LEU SEQRES 15 A 438 ALA CYS VAL VAL CYS ARG VAL SER ASP ASP PRO SER LYS SEQRES 16 A 438 PRO GLN ASP PRO ASN VAL ASP PRO ALA THR GLN ILE ALA SEQRES 17 A 438 VAL LEU LEU VAL THR ARG GLU THR ILE ALA ASN ASN LYS SEQRES 18 A 438 LYS ASP ALA TYR GLN ILE LEU GLY GLU PRO GLU LEU ALA SEQRES 19 A 438 GLY HIS ILE THR THR SER GLY PRO HIS THR ARG PHE THR SEQRES 20 A 438 GLU PHE HIS VAL PRO HIS GLU ASN LEU LEU CYS THR PRO SEQRES 21 A 438 GLY LEU LYS ALA GLN GLY LEU VAL GLU THR ALA PHE ALA SEQRES 22 A 438 MET SER ALA ALA LEU VAL GLY ALA MET ALA ILE GLY THR SEQRES 23 A 438 ALA ARG ALA ALA PHE GLU GLU ALA LEU VAL PHE ALA LYS SEQRES 24 A 438 SER ASP THR ARG GLY GLY SER LYS HIS ILE ILE GLU HIS SEQRES 25 A 438 GLN SER VAL ALA ASP LYS LEU ILE ASP CYS LYS ILE ARG SEQRES 26 A 438 LEU GLU THR SER ARG LEU LEU VAL TRP LYS ALA VAL THR SEQRES 27 A 438 THR LEU GLU ASP GLU ALA LEU GLU TRP LYS VAL LYS LEU SEQRES 28 A 438 GLU MET ALA MET GLN THR LYS ILE TYR THR THR ASP VAL SEQRES 29 A 438 ALA VAL GLU CYS VAL ILE ASP ALA MET LYS ALA VAL GLY SEQRES 30 A 438 MET LYS SER TYR ALA LYS ASP MET SER PHE PRO ARG LEU SEQRES 31 A 438 LEU ASN GLU VAL MET CYS TYR PRO LEU PHE ASN GLY GLY SEQRES 32 A 438 ASN ILE GLY LEU ARG ARG ARG GLN MET GLN ARG VAL MET SEQRES 33 A 438 ALA LEU GLU ASP TYR GLU PRO TRP ALA ALA THR TYR GLY SEQRES 34 A 438 SER SER LYS VAL ASP LYS SER ARG LEU SEQRES 1 B 438 VAL ASP PHE LYS LEU SER PRO SER GLN LEU GLU ALA ARG SEQRES 2 B 438 ARG HIS ALA GLN ALA PHE ALA ASN THR VAL LEU THR LYS SEQRES 3 B 438 ALA SER ALA GLU TYR SER THR GLN LYS ASP GLN LEU SER SEQRES 4 B 438 ARG PHE GLN ALA THR ARG PRO PHE TYR ARG GLU ALA VAL SEQRES 5 B 438 ARG HIS GLY LEU ILE LYS ALA GLN VAL PRO ILE PRO LEU SEQRES 6 B 438 GLY GLY THR MET GLU SER LEU VAL HIS GLU SER ILE ILE SEQRES 7 B 438 LEU GLU GLU LEU PHE ALA VAL GLU PRO ALA THR SER ILE SEQRES 8 B 438 THR ILE VAL ALA THR ALA LEU GLY LEU MET PRO VAL ILE SEQRES 9 B 438 LEU CYS ASP SER PRO SER LEU GLN GLU LYS PHE LEU LYS SEQRES 10 B 438 PRO PHE ILE SER GLY GLU GLY GLU PRO LEU ALA SER LEU SEQRES 11 B 438 MET HIS SER GLU PRO ASN GLY THR ALA ASN TRP LEU GLN SEQRES 12 B 438 LYS GLY GLY PRO GLY LEU GLN THR THR ALA ARG LYS VAL SEQRES 13 B 438 GLY ASN GLU TRP VAL ILE SER GLY GLU LYS LEU TRP PRO SEQRES 14 B 438 SER ASN SER GLY GLY TRP ASP TYR LYS GLY ALA ASP LEU SEQRES 15 B 438 ALA CYS VAL VAL CYS ARG VAL SER ASP ASP PRO SER LYS SEQRES 16 B 438 PRO GLN ASP PRO ASN VAL ASP PRO ALA THR GLN ILE ALA SEQRES 17 B 438 VAL LEU LEU VAL THR ARG GLU THR ILE ALA ASN ASN LYS SEQRES 18 B 438 LYS ASP ALA TYR GLN ILE LEU GLY GLU PRO GLU LEU ALA SEQRES 19 B 438 GLY HIS ILE THR THR SER GLY PRO HIS THR ARG PHE THR SEQRES 20 B 438 GLU PHE HIS VAL PRO HIS GLU ASN LEU LEU CYS THR PRO SEQRES 21 B 438 GLY LEU LYS ALA GLN GLY LEU VAL GLU THR ALA PHE ALA SEQRES 22 B 438 MET SER ALA ALA LEU VAL GLY ALA MET ALA ILE GLY THR SEQRES 23 B 438 ALA ARG ALA ALA PHE GLU GLU ALA LEU VAL PHE ALA LYS SEQRES 24 B 438 SER ASP THR ARG GLY GLY SER LYS HIS ILE ILE GLU HIS SEQRES 25 B 438 GLN SER VAL ALA ASP LYS LEU ILE ASP CYS LYS ILE ARG SEQRES 26 B 438 LEU GLU THR SER ARG LEU LEU VAL TRP LYS ALA VAL THR SEQRES 27 B 438 THR LEU GLU ASP GLU ALA LEU GLU TRP LYS VAL LYS LEU SEQRES 28 B 438 GLU MET ALA MET GLN THR LYS ILE TYR THR THR ASP VAL SEQRES 29 B 438 ALA VAL GLU CYS VAL ILE ASP ALA MET LYS ALA VAL GLY SEQRES 30 B 438 MET LYS SER TYR ALA LYS ASP MET SER PHE PRO ARG LEU SEQRES 31 B 438 LEU ASN GLU VAL MET CYS TYR PRO LEU PHE ASN GLY GLY SEQRES 32 B 438 ASN ILE GLY LEU ARG ARG ARG GLN MET GLN ARG VAL MET SEQRES 33 B 438 ALA LEU GLU ASP TYR GLU PRO TRP ALA ALA THR TYR GLY SEQRES 34 B 438 SER SER LYS VAL ASP LYS SER ARG LEU SEQRES 1 C 438 VAL ASP PHE LYS LEU SER PRO SER GLN LEU GLU ALA ARG SEQRES 2 C 438 ARG HIS ALA GLN ALA PHE ALA ASN THR VAL LEU THR LYS SEQRES 3 C 438 ALA SER ALA GLU TYR SER THR GLN LYS ASP GLN LEU SER SEQRES 4 C 438 ARG PHE GLN ALA THR ARG PRO PHE TYR ARG GLU ALA VAL SEQRES 5 C 438 ARG HIS GLY LEU ILE LYS ALA GLN VAL PRO ILE PRO LEU SEQRES 6 C 438 GLY GLY THR MET GLU SER LEU VAL HIS GLU SER ILE ILE SEQRES 7 C 438 LEU GLU GLU LEU PHE ALA VAL GLU PRO ALA THR SER ILE SEQRES 8 C 438 THR ILE VAL ALA THR ALA LEU GLY LEU MET PRO VAL ILE SEQRES 9 C 438 LEU CYS ASP SER PRO SER LEU GLN GLU LYS PHE LEU LYS SEQRES 10 C 438 PRO PHE ILE SER GLY GLU GLY GLU PRO LEU ALA SER LEU SEQRES 11 C 438 MET HIS SER GLU PRO ASN GLY THR ALA ASN TRP LEU GLN SEQRES 12 C 438 LYS GLY GLY PRO GLY LEU GLN THR THR ALA ARG LYS VAL SEQRES 13 C 438 GLY ASN GLU TRP VAL ILE SER GLY GLU LYS LEU TRP PRO SEQRES 14 C 438 SER ASN SER GLY GLY TRP ASP TYR LYS GLY ALA ASP LEU SEQRES 15 C 438 ALA CYS VAL VAL CYS ARG VAL SER ASP ASP PRO SER LYS SEQRES 16 C 438 PRO GLN ASP PRO ASN VAL ASP PRO ALA THR GLN ILE ALA SEQRES 17 C 438 VAL LEU LEU VAL THR ARG GLU THR ILE ALA ASN ASN LYS SEQRES 18 C 438 LYS ASP ALA TYR GLN ILE LEU GLY GLU PRO GLU LEU ALA SEQRES 19 C 438 GLY HIS ILE THR THR SER GLY PRO HIS THR ARG PHE THR SEQRES 20 C 438 GLU PHE HIS VAL PRO HIS GLU ASN LEU LEU CYS THR PRO SEQRES 21 C 438 GLY LEU LYS ALA GLN GLY LEU VAL GLU THR ALA PHE ALA SEQRES 22 C 438 MET SER ALA ALA LEU VAL GLY ALA MET ALA ILE GLY THR SEQRES 23 C 438 ALA ARG ALA ALA PHE GLU GLU ALA LEU VAL PHE ALA LYS SEQRES 24 C 438 SER ASP THR ARG GLY GLY SER LYS HIS ILE ILE GLU HIS SEQRES 25 C 438 GLN SER VAL ALA ASP LYS LEU ILE ASP CYS LYS ILE ARG SEQRES 26 C 438 LEU GLU THR SER ARG LEU LEU VAL TRP LYS ALA VAL THR SEQRES 27 C 438 THR LEU GLU ASP GLU ALA LEU GLU TRP LYS VAL LYS LEU SEQRES 28 C 438 GLU MET ALA MET GLN THR LYS ILE TYR THR THR ASP VAL SEQRES 29 C 438 ALA VAL GLU CYS VAL ILE ASP ALA MET LYS ALA VAL GLY SEQRES 30 C 438 MET LYS SER TYR ALA LYS ASP MET SER PHE PRO ARG LEU SEQRES 31 C 438 LEU ASN GLU VAL MET CYS TYR PRO LEU PHE ASN GLY GLY SEQRES 32 C 438 ASN ILE GLY LEU ARG ARG ARG GLN MET GLN ARG VAL MET SEQRES 33 C 438 ALA LEU GLU ASP TYR GLU PRO TRP ALA ALA THR TYR GLY SEQRES 34 C 438 SER SER LYS VAL ASP LYS SER ARG LEU SEQRES 1 D 438 VAL ASP PHE LYS LEU SER PRO SER GLN LEU GLU ALA ARG SEQRES 2 D 438 ARG HIS ALA GLN ALA PHE ALA ASN THR VAL LEU THR LYS SEQRES 3 D 438 ALA SER ALA GLU TYR SER THR GLN LYS ASP GLN LEU SER SEQRES 4 D 438 ARG PHE GLN ALA THR ARG PRO PHE TYR ARG GLU ALA VAL SEQRES 5 D 438 ARG HIS GLY LEU ILE LYS ALA GLN VAL PRO ILE PRO LEU SEQRES 6 D 438 GLY GLY THR MET GLU SER LEU VAL HIS GLU SER ILE ILE SEQRES 7 D 438 LEU GLU GLU LEU PHE ALA VAL GLU PRO ALA THR SER ILE SEQRES 8 D 438 THR ILE VAL ALA THR ALA LEU GLY LEU MET PRO VAL ILE SEQRES 9 D 438 LEU CYS ASP SER PRO SER LEU GLN GLU LYS PHE LEU LYS SEQRES 10 D 438 PRO PHE ILE SER GLY GLU GLY GLU PRO LEU ALA SER LEU SEQRES 11 D 438 MET HIS SER GLU PRO ASN GLY THR ALA ASN TRP LEU GLN SEQRES 12 D 438 LYS GLY GLY PRO GLY LEU GLN THR THR ALA ARG LYS VAL SEQRES 13 D 438 GLY ASN GLU TRP VAL ILE SER GLY GLU LYS LEU TRP PRO SEQRES 14 D 438 SER ASN SER GLY GLY TRP ASP TYR LYS GLY ALA ASP LEU SEQRES 15 D 438 ALA CYS VAL VAL CYS ARG VAL SER ASP ASP PRO SER LYS SEQRES 16 D 438 PRO GLN ASP PRO ASN VAL ASP PRO ALA THR GLN ILE ALA SEQRES 17 D 438 VAL LEU LEU VAL THR ARG GLU THR ILE ALA ASN ASN LYS SEQRES 18 D 438 LYS ASP ALA TYR GLN ILE LEU GLY GLU PRO GLU LEU ALA SEQRES 19 D 438 GLY HIS ILE THR THR SER GLY PRO HIS THR ARG PHE THR SEQRES 20 D 438 GLU PHE HIS VAL PRO HIS GLU ASN LEU LEU CYS THR PRO SEQRES 21 D 438 GLY LEU LYS ALA GLN GLY LEU VAL GLU THR ALA PHE ALA SEQRES 22 D 438 MET SER ALA ALA LEU VAL GLY ALA MET ALA ILE GLY THR SEQRES 23 D 438 ALA ARG ALA ALA PHE GLU GLU ALA LEU VAL PHE ALA LYS SEQRES 24 D 438 SER ASP THR ARG GLY GLY SER LYS HIS ILE ILE GLU HIS SEQRES 25 D 438 GLN SER VAL ALA ASP LYS LEU ILE ASP CYS LYS ILE ARG SEQRES 26 D 438 LEU GLU THR SER ARG LEU LEU VAL TRP LYS ALA VAL THR SEQRES 27 D 438 THR LEU GLU ASP GLU ALA LEU GLU TRP LYS VAL LYS LEU SEQRES 28 D 438 GLU MET ALA MET GLN THR LYS ILE TYR THR THR ASP VAL SEQRES 29 D 438 ALA VAL GLU CYS VAL ILE ASP ALA MET LYS ALA VAL GLY SEQRES 30 D 438 MET LYS SER TYR ALA LYS ASP MET SER PHE PRO ARG LEU SEQRES 31 D 438 LEU ASN GLU VAL MET CYS TYR PRO LEU PHE ASN GLY GLY SEQRES 32 D 438 ASN ILE GLY LEU ARG ARG ARG GLN MET GLN ARG VAL MET SEQRES 33 D 438 ALA LEU GLU ASP TYR GLU PRO TRP ALA ALA THR TYR GLY SEQRES 34 D 438 SER SER LYS VAL ASP LYS SER ARG LEU
HET FAD A 500 53 HET N6C A 600 9 HET FAD B 500 53 HET N6C B 600 9 HET FAD C 500 53 HET N6C C 600 9 HET FAD D 500 53 HET N6C D 600 9 HET GOL A 700 6 HET GOL A 701 6 HET GOL B 700 6 HET GOL B 701 6 HET GOL C 701 6 HET GOL C 700 6 HET GOL D 701 6 HET GOL D 700 6
HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM N6C 1-NITROHEXANE HETNAM GOL GLYCEROL
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 5 FAD 4(C27 H33 N9 O15 P2) FORMUL 6 N6C 4(C6 H13 N O2) FORMUL 13 GOL 8(C3 H8 O3) FORMUL 21 HOH *650(H2 O)
HELIX 1 1 SER A 7 VAL A 24 1 18 HELIX 2 2 LYS A 27 SER A 33 1 7 HELIX 3 3 ASP A 37 THR A 45 1 9 HELIX 4 4 THR A 45 HIS A 55 1 11 HELIX 5 5 ILE A 58 VAL A 62 5 5 HELIX 6 6 PRO A 63 GLY A 67 5 5 HELIX 7 7 SER A 72 ALA A 85 1 14 HELIX 8 8 THR A 90 CYS A 107 1 18 HELIX 9 9 SER A 109 SER A 122 1 14 HELIX 10 10 ASP A 203 THR A 206 5 4 HELIX 11 11 THR A 214 ASN A 220 1 7 HELIX 12 12 LYS A 222 ASP A 224 5 3 HELIX 13 13 GLU A 255 LEU A 257 5 3 HELIX 14 14 GLY A 262 ASP A 302 1 41 HELIX 15 15 HIS A 309 GLU A 312 5 4 HELIX 16 16 HIS A 313 GLU A 342 1 30 HELIX 17 17 GLU A 347 GLY A 378 1 32 HELIX 18 18 MET A 379 ALA A 383 5 5 HELIX 19 19 SER A 387 MET A 396 1 10 HELIX 20 20 LEU A 408 LEU A 419 1 12 HELIX 21 21 TRP A 425 GLY A 430 1 6 HELIX 22 22 SER B 7 VAL B 24 1 18 HELIX 23 23 LYS B 27 SER B 33 1 7 HELIX 24 24 ASP B 37 THR B 45 1 9 HELIX 25 25 THR B 45 HIS B 55 1 11 HELIX 26 26 ILE B 58 VAL B 62 5 5 HELIX 27 27 PRO B 63 GLY B 67 5 5 HELIX 28 28 SER B 72 GLU B 87 1 16 HELIX 29 29 THR B 90 CYS B 107 1 18 HELIX 30 30 SER B 109 LYS B 118 1 10 HELIX 31 31 PRO B 119 SER B 122 5 4 HELIX 32 32 ASP B 203 THR B 206 5 4 HELIX 33 33 THR B 214 ASN B 220 1 7 HELIX 34 34 LYS B 222 ASP B 224 5 3 HELIX 35 35 GLU B 255 LEU B 257 5 3 HELIX 36 36 GLY B 262 ASP B 302 1 41 HELIX 37 37 HIS B 309 GLU B 312 5 4 HELIX 38 38 HIS B 313 GLU B 342 1 30 HELIX 39 39 GLU B 347 GLY B 378 1 32 HELIX 40 40 MET B 379 ALA B 383 5 5 HELIX 41 41 SER B 387 MET B 396 1 10 HELIX 42 42 LEU B 408 LEU B 419 1 12 HELIX 43 43 TRP B 425 GLY B 430 1 6 HELIX 44 44 SER C 7 VAL C 24 1 18 HELIX 45 45 LYS C 27 SER C 33 1 7 HELIX 46 46 ASP C 37 THR C 45 1 9 HELIX 47 47 THR C 45 HIS C 55 1 11 HELIX 48 48 ILE C 58 VAL C 62 5 5 HELIX 49 49 PRO C 63 GLY C 67 5 5 HELIX 50 50 SER C 72 ALA C 85 1 14 HELIX 51 51 THR C 90 CYS C 107 1 18 HELIX 52 52 SER C 109 SER C 122 1 14 HELIX 53 53 ASP C 203 THR C 206 5 4 HELIX 54 54 THR C 214 ASN C 220 1 7 HELIX 55 55 LYS C 222 ASP C 224 5 3 HELIX 56 56 GLU C 255 LEU C 257 5 3 HELIX 57 57 GLY C 262 ASP C 302 1 41 HELIX 58 58 HIS C 309 GLU C 312 5 4 HELIX 59 59 HIS C 313 ASP C 343 1 31 HELIX 60 60 GLU C 347 GLY C 378 1 32 HELIX 61 61 MET C 379 ALA C 383 5 5 HELIX 62 62 SER C 387 MET C 396 1 10 HELIX 63 63 LEU C 408 LEU C 419 1 12 HELIX 64 64 TRP C 425 GLY C 430 1 6 HELIX 65 65 SER D 7 VAL D 24 1 18 HELIX 66 66 LYS D 27 SER D 33 1 7 HELIX 67 67 ASP D 37 THR D 45 1 9 HELIX 68 68 THR D 45 HIS D 55 1 11 HELIX 69 69 ILE D 58 VAL D 62 5 5 HELIX 70 70 PRO D 63 GLY D 67 5 5 HELIX 71 71 SER D 72 ALA D 85 1 14 HELIX 72 72 THR D 90 CYS D 107 1 18 HELIX 73 73 SER D 109 LYS D 118 1 10 HELIX 74 74 PRO D 119 ILE D 121 5 3 HELIX 75 75 ASP D 203 THR D 206 5 4 HELIX 76 76 THR D 214 ASN D 220 1 7 HELIX 77 77 LYS D 222 ASP D 224 5 3 HELIX 78 78 GLU D 255 LEU D 257 5 3 HELIX 79 79 GLY D 262 ASP D 302 1 41 HELIX 80 80 HIS D 309 GLU D 312 5 4 HELIX 81 81 HIS D 313 GLU D 342 1 30 HELIX 82 82 GLU D 347 GLY D 378 1 32 HELIX 83 83 MET D 379 ALA D 383 5 5 HELIX 84 84 SER D 387 MET D 396 1 10 HELIX 85 85 LEU D 408 LEU D 419 1 12 HELIX 86 86 TRP D 425 GLY D 430 1 6
SHEET 1 A 3 ALA A 129 MET A 132 0 SHEET 2 A 3 LEU A 183 VAL A 190 1 O CYS A 185 N SER A 130 SHEET 3 A 3 ILE A 208 VAL A 213 -1 O LEU A 211 N VAL A 186 SHEET 1 B 6 ALA A 129 MET A 132 0 SHEET 2 B 6 LEU A 183 VAL A 190 1 O CYS A 185 N SER A 130 SHEET 3 B 6 THR A 153 VAL A 157 1 N ALA A 154 O ARG A 189 SHEET 4 B 6 GLU A 160 LYS A 167 -1 O GLU A 160 N VAL A 157 SHEET 5 B 6 HIS A 244 PRO A 253 -1 O PHE A 247 N GLY A 165 SHEET 6 B 6 TYR A 226 GLY A 230 -1 N GLN A 227 O ARG A 246 SHEET 1 C 3 ALA B 129 MET B 132 0 SHEET 2 C 3 LEU B 183 VAL B 190 1 O CYS B 185 N MET B 132 SHEET 3 C 3 ILE B 208 VAL B 213 -1 O ALA B 209 N CYS B 188 SHEET 1 D 6 ALA B 129 MET B 132 0 SHEET 2 D 6 LEU B 183 VAL B 190 1 O CYS B 185 N MET B 132 SHEET 3 D 6 THR B 153 VAL B 157 1 N ALA B 154 O ARG B 189 SHEET 4 D 6 GLU B 160 LEU B 168 -1 O SER B 164 N THR B 153 SHEET 5 D 6 HIS B 244 PRO B 253 -1 O PHE B 247 N GLY B 165 SHEET 6 D 6 TYR B 226 GLY B 230 -1 N GLY B 230 O HIS B 244 SHEET 1 E 3 ALA C 129 MET C 132 0 SHEET 2 E 3 LEU C 183 VAL C 190 1 O CYS C 185 N SER C 130 SHEET 3 E 3 ILE C 208 VAL C 213 -1 O ALA C 209 N CYS C 188 SHEET 1 F 6 ALA C 129 MET C 132 0 SHEET 2 F 6 LEU C 183 VAL C 190 1 O CYS C 185 N SER C 130 SHEET 3 F 6 THR C 153 VAL C 157 1 N ALA C 154 O ARG C 189 SHEET 4 F 6 GLU C 160 LEU C 168 -1 O GLU C 160 N VAL C 157 SHEET 5 F 6 HIS C 244 PRO C 253 -1 O PHE C 247 N GLY C 165 SHEET 6 F 6 TYR C 226 GLY C 230 -1 N GLN C 227 O ARG C 246 SHEET 1 G 3 ALA D 129 MET D 132 0 SHEET 2 G 3 LEU D 183 VAL D 190 1 O CYS D 185 N SER D 130 SHEET 3 G 3 ILE D 208 VAL D 213 -1 O ALA D 209 N CYS D 188 SHEET 1 H 6 ALA D 129 MET D 132 0 SHEET 2 H 6 LEU D 183 VAL D 190 1 O CYS D 185 N SER D 130 SHEET 3 H 6 THR D 153 VAL D 157 1 N ALA D 154 O ARG D 189 SHEET 4 H 6 GLU D 160 LYS D 167 -1 O GLU D 160 N VAL D 157 SHEET 5 H 6 HIS D 244 PRO D 253 -1 O PHE D 247 N GLY D 165 SHEET 6 H 6 TYR D 226 GLY D 230 -1 N GLN D 227 O ARG D 246
SITE 1 AC1 25 LEU A 131 HIS A 133 SER A 134 GLY A 138 SITE 2 AC1 25 THR A 139 ALA A 140 ASN A 141 TRP A 169 SITE 3 AC1 25 PRO A 170 SER A 171 LEU A 400 PHE A 401 SITE 4 AC1 25 ASN A 402 GLY A 403 GLY A 404 ILE A 406 SITE 5 AC1 25 GLY A 407 ARG B 304 ILE B 310 HIS B 313 SITE 6 AC1 25 LYS B 375 ALA B 376 GLY B 378 MET B 379 SITE 7 AC1 25 GLN C 314 SITE 1 AC2 3 LEU A 99 PHE A 401 ASN A 402 SITE 1 AC3 26 ARG A 304 ILE A 310 HIS A 313 LYS A 375 SITE 2 AC3 26 ALA A 376 GLY A 378 MET A 379 LEU B 131 SITE 3 AC3 26 HIS B 133 SER B 134 GLY B 138 THR B 139 SITE 4 AC3 26 ALA B 140 ASN B 141 TRP B 169 PRO B 170 SITE 5 AC3 26 SER B 171 LEU B 400 PHE B 401 ASN B 402 SITE 6 AC3 26 GLY B 403 GLY B 404 ILE B 406 GLY B 407 SITE 7 AC3 26 ARG B 411 GLN D 314 SITE 1 AC4 3 LEU B 99 PHE B 401 ASN B 402 SITE 1 AC5 26 GLN A 314 LEU C 131 HIS C 133 SER C 134 SITE 2 AC5 26 GLY C 138 THR C 139 ALA C 140 ASN C 141 SITE 3 AC5 26 TRP C 169 PRO C 170 SER C 171 LEU C 400 SITE 4 AC5 26 PHE C 401 ASN C 402 GLY C 403 GLY C 404 SITE 5 AC5 26 ILE C 406 GLY C 407 ARG C 411 ARG D 304 SITE 6 AC5 26 ILE D 310 HIS D 313 LYS D 375 ALA D 376 SITE 7 AC5 26 GLY D 378 MET D 379 SITE 1 AC6 4 PHE C 273 SER C 276 PHE C 401 ASN C 402 SITE 1 AC7 26 GLN B 314 ARG C 304 ILE C 310 HIS C 313 SITE 2 AC7 26 LYS C 375 ALA C 376 GLY C 378 MET C 379 SITE 3 AC7 26 LEU D 131 HIS D 133 SER D 134 GLY D 138 SITE 4 AC7 26 THR D 139 ALA D 140 ASN D 141 TRP D 169 SITE 5 AC7 26 PRO D 170 SER D 171 LEU D 400 PHE D 401 SITE 6 AC7 26 ASN D 402 GLY D 403 GLY D 404 ILE D 406 SITE 7 AC7 26 GLY D 407 LEU D 408 SITE 1 AC8 3 PHE D 273 PHE D 401 ASN D 402 SITE 1 AC9 6 GLU A 270 PHE A 273 GLY A 403 LEU A 408 SITE 2 AC9 6 ARG A 409 GLN A 412 SITE 1 BC1 3 GLN C 10 SER C 72 GLU C 342 SITE 1 BC2 4 GLU B 270 GLY B 403 LEU B 408 GLN B 412 SITE 1 BC3 3 GLN D 10 SER D 72 GLU D 342 SITE 1 BC4 5 GLU C 270 PHE C 273 GLY C 403 LEU C 408 SITE 2 BC4 5 GLN C 412 SITE 1 BC5 3 GLN A 10 SER A 72 GLU A 342 SITE 1 BC6 4 GLU D 270 GLY D 403 LEU D 408 GLN D 412 SITE 1 BC7 3 GLN B 10 SER B 72 GLU B 342
CRYST1 107.875 107.875 338.442 90.00 90.00 120.00 P 32 2 1 24
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009270 0.005352 0.000000 0.00000
SCALE2 0.000000 0.010704 0.000000 0.00000
SCALE3 0.000000 0.000000 0.002955 0.00000