10 20 30 40 50 60 70 80 3D6R - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER VIRAL PROTEIN 20-MAY-08 3D6R
TITLE STRUCTURE OF AN AVIAN INFLUENZA A VIRUS NS1 PROTEIN TITLE 2 EFFECTOR DOMAIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 1; COMPND 3 CHAIN: B, A; COMPND 4 FRAGMENT: EFFECTOR DOMAIN (UNP RESIDUES 73-230); COMPND 5 SYNONYM: NS1, NS1A; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 385582; SOURCE 4 STRAIN: A/DUCK/ALBERTA/60/1976 H12N5; SOURCE 5 GENE: NS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI
KEYWDS INFLUENZA, NS1, EFFECTOR DOMAIN, ALTERNATIVE SPLICING, KEYWDS 2 CYTOPLASM, HOST-VIRUS INTERACTION, INTERFERON ANTIVIRAL KEYWDS 3 SYSTEM EVASION, NUCLEUS, RNA-BINDING, SUPPRESSOR OF RNA KEYWDS 4 SILENCING, VIRAL PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR B.G.HALE,W.S.BARCLAY,R.E.RANDALL,R.J.RUSSELL
REVDAT 2 24-FEB-09 3D6R 1 VERSN REVDAT 1 12-AUG-08 3D6R 0
JRNL AUTH B.G.HALE,W.S.BARCLAY,R.E.RANDALL,R.J.RUSSELL JRNL TITL STRUCTURE OF AN AVIAN INFLUENZA A VIRUS NS1 JRNL TITL 2 PROTEIN EFFECTOR DOMAIN. JRNL REF VIROLOGY V. 378 1 2008 JRNL REFN ISSN 0042-6822 JRNL PMID 18585749 JRNL DOI 10.1016/J.VIROL.2008.05.026
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.900 REMARK 3 COMPLETENESS FOR RANGE (%) : 47.8 REMARK 3 NUMBER OF REFLECTIONS : 26146 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.140 REMARK 3 FREE R VALUE TEST SET COUNT : 1344 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9710 - 4.2900 0.52 2737 130 0.2000 0.2280 REMARK 3 2 4.2900 - 3.4110 0.51 2627 152 0.1560 0.1850 REMARK 3 3 3.4110 - 2.9810 0.51 2644 133 0.1760 0.2200 REMARK 3 4 2.9810 - 2.7090 0.51 2637 151 0.1900 0.2310 REMARK 3 5 2.7090 - 2.5160 0.51 2613 144 0.1850 0.2520 REMARK 3 6 2.5160 - 2.3670 0.51 2680 133 0.1820 0.2230 REMARK 3 7 2.3670 - 2.2490 0.51 2587 158 0.1750 0.2220 REMARK 3 8 2.2490 - 2.1510 0.48 2533 135 0.1740 0.1980 REMARK 3 9 2.1510 - 2.0690 0.43 2210 121 0.1910 0.2750 REMARK 3 10 2.0690 - 1.9970 0.30 1534 87 0.2320 0.2830 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 58.60 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.62 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.58600 REMARK 3 B22 (A**2) : 2.58600 REMARK 3 B33 (A**2) : -5.17200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1936 REMARK 3 ANGLE : 1.069 2608 REMARK 3 CHIRALITY : 0.071 296 REMARK 3 PLANARITY : 0.004 334 REMARK 3 DIHEDRAL : 15.604 732 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 3D6R COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAY-08. REMARK 100 THE RCSB ID CODE IS RCSB047662.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.542 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26147 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 85.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 49.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8K, HEPES, NA THIOCYANATE, REMARK 280 GLYCEROL, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 225.84467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 112.92233 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 169.38350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 56.46117 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 282.30583 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 225.84467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 112.92233 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 56.46117 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 169.38350 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 282.30583 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -113.01458 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -56.46117 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 0.500000 -0.866025 0.000000 -65.24900 REMARK 350 BIOMT2 3 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -56.46117 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 -32.62450 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 -56.50729 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -113.01458 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 270 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 301 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 368 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 401 LIES ON A SPECIAL POSITION.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR B 73 REMARK 465 ASP B 74 REMARK 465 GLU B 75 REMARK 465 ASN B 76 REMARK 465 LEU B 77 REMARK 465 LYS B 78 REMARK 465 ILE B 79 REMARK 465 ALA B 80 REMARK 465 ILE B 81 REMARK 465 ALA B 82 REMARK 465 TRP B 203 REMARK 465 GLY B 204 REMARK 465 ILE B 205 REMARK 465 ARG B 206 REMARK 465 ASP B 207 REMARK 465 GLU B 208 REMARK 465 ASN B 209 REMARK 465 GLY B 210 REMARK 465 GLY B 211 REMARK 465 PRO B 212 REMARK 465 PRO B 213 REMARK 465 LEU B 214 REMARK 465 PRO B 215 REMARK 465 PRO B 216 REMARK 465 LYS B 217 REMARK 465 ARG B 225 REMARK 465 VAL B 226 REMARK 465 GLU B 227 REMARK 465 SER B 228 REMARK 465 GLU B 229 REMARK 465 VAL B 230 REMARK 465 THR A 73 REMARK 465 ASP A 74 REMARK 465 GLU A 75 REMARK 465 ASN A 76 REMARK 465 LEU A 77 REMARK 465 LYS A 78 REMARK 465 ILE A 79 REMARK 465 ALA A 80 REMARK 465 ILE A 81 REMARK 465 ALA A 82 REMARK 465 SER A 83 REMARK 465 SER A 84 REMARK 465 PRO A 85 REMARK 465 ALA A 86 REMARK 465 PRO A 87 REMARK 465 ARG A 88 REMARK 465 TRP A 203 REMARK 465 GLY A 204 REMARK 465 ILE A 205 REMARK 465 ARG A 206 REMARK 465 ASP A 207 REMARK 465 GLU A 208 REMARK 465 ASN A 209 REMARK 465 GLY A 210 REMARK 465 GLY A 211 REMARK 465 PRO A 212 REMARK 465 PRO A 213 REMARK 465 LEU A 214 REMARK 465 PRO A 215 REMARK 465 PRO A 216 REMARK 465 LYS A 217 REMARK 465 GLN A 218 REMARK 465 LYS A 219 REMARK 465 ARG A 220 REMARK 465 TYR A 221 REMARK 465 MET A 222 REMARK 465 ALA A 223 REMARK 465 ARG A 224 REMARK 465 ARG A 225 REMARK 465 VAL A 226 REMARK 465 GLU A 227 REMARK 465 SER A 228 REMARK 465 GLU A 229 REMARK 465 VAL A 230
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR B 221 OH TYR B 221 8435 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE B 138 77.03 46.47 REMARK 500 LYS B 219 -24.60 -156.16 REMARK 500 PHE A 138 -57.02 77.92 REMARK 500 ASP A 139 23.20 -167.69 REMARK 500 MET A 166 62.21 -152.65 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 411 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A 368 DISTANCE = 8.14 ANGSTROMS REMARK 525 HOH A 390 DISTANCE = 5.76 ANGSTROMS REMARK 525 HOH B 476 DISTANCE = 5.27 ANGSTROMS REMARK 525 HOH B 497 DISTANCE = 8.83 ANGSTROMS REMARK 525 HOH B 499 DISTANCE = 5.74 ANGSTROMS
DBREF 3D6R B 73 230 UNP P69270 NS1_I76A2 73 230 DBREF 3D6R A 73 230 UNP P69270 NS1_I76A2 73 230
SEQRES 1 B 158 THR ASP GLU ASN LEU LYS ILE ALA ILE ALA SER SER PRO SEQRES 2 B 158 ALA PRO ARG TYR ILE THR ASP MET SER ILE GLU GLU ILE SEQRES 3 B 158 SER ARG GLU TRP TYR MET LEU MET PRO ARG GLN LYS ILE SEQRES 4 B 158 THR GLY GLY LEU MET VAL LYS MET ASP GLN ALA ILE MET SEQRES 5 B 158 ASP LYS ARG ILE THR LEU LYS ALA ASN PHE SER VAL LEU SEQRES 6 B 158 PHE ASP GLN LEU GLU THR LEU VAL SER LEU ARG ALA PHE SEQRES 7 B 158 THR ASP ASP GLY ALA ILE VAL ALA GLU ILE SER PRO ILE SEQRES 8 B 158 PRO SER MET PRO GLY HIS SER THR GLU ASP VAL LYS ASN SEQRES 9 B 158 ALA ILE GLY ILE LEU ILE GLY GLY LEU GLU TRP ASN ASP SEQRES 10 B 158 ASN SER ILE ARG ALA SER GLU ASN ILE GLN ARG PHE ALA SEQRES 11 B 158 TRP GLY ILE ARG ASP GLU ASN GLY GLY PRO PRO LEU PRO SEQRES 12 B 158 PRO LYS GLN LYS ARG TYR MET ALA ARG ARG VAL GLU SER SEQRES 13 B 158 GLU VAL SEQRES 1 A 158 THR ASP GLU ASN LEU LYS ILE ALA ILE ALA SER SER PRO SEQRES 2 A 158 ALA PRO ARG TYR ILE THR ASP MET SER ILE GLU GLU ILE SEQRES 3 A 158 SER ARG GLU TRP TYR MET LEU MET PRO ARG GLN LYS ILE SEQRES 4 A 158 THR GLY GLY LEU MET VAL LYS MET ASP GLN ALA ILE MET SEQRES 5 A 158 ASP LYS ARG ILE THR LEU LYS ALA ASN PHE SER VAL LEU SEQRES 6 A 158 PHE ASP GLN LEU GLU THR LEU VAL SER LEU ARG ALA PHE SEQRES 7 A 158 THR ASP ASP GLY ALA ILE VAL ALA GLU ILE SER PRO ILE SEQRES 8 A 158 PRO SER MET PRO GLY HIS SER THR GLU ASP VAL LYS ASN SEQRES 9 A 158 ALA ILE GLY ILE LEU ILE GLY GLY LEU GLU TRP ASN ASP SEQRES 10 A 158 ASN SER ILE ARG ALA SER GLU ASN ILE GLN ARG PHE ALA SEQRES 11 A 158 TRP GLY ILE ARG ASP GLU ASN GLY GLY PRO PRO LEU PRO SEQRES 12 A 158 PRO LYS GLN LYS ARG TYR MET ALA ARG ARG VAL GLU SER SEQRES 13 A 158 GLU VAL
FORMUL 3 HOH *387(H2 O)
HELIX 1 1 SER B 94 ARG B 100 1 7 HELIX 2 2 SER B 170 TRP B 187 1 18 HELIX 3 3 SER B 195 ALA B 202 1 8 HELIX 4 4 SER A 94 ARG A 100 1 7 HELIX 5 5 SER A 170 ASN A 188 1 19 HELIX 6 6 SER A 195 ALA A 202 1 8
SHEET 1 A 6 ARG B 88 THR B 91 0 SHEET 2 A 6 ARG B 127 LEU B 137 -1 O PHE B 134 N ILE B 90 SHEET 3 A 6 GLN B 140 THR B 151 -1 O GLU B 142 N SER B 135 SHEET 4 A 6 ILE B 156 PRO B 162 -1 O VAL B 157 N ALA B 149 SHEET 5 A 6 LEU B 115 ASP B 120 -1 N MET B 116 O SER B 161 SHEET 6 A 6 PRO B 107 THR B 112 -1 N LYS B 110 O VAL B 117 SHEET 1 B 3 ARG B 88 THR B 91 0 SHEET 2 B 3 ARG B 127 LEU B 137 -1 O PHE B 134 N ILE B 90 SHEET 3 B 3 SER B 191 ALA B 194 1 O SER B 191 N ILE B 128 SHEET 1 C 6 ILE A 90 THR A 91 0 SHEET 2 C 6 ARG A 127 VAL A 136 -1 O PHE A 134 N ILE A 90 SHEET 3 C 6 LEU A 141 THR A 151 -1 O GLU A 142 N SER A 135 SHEET 4 C 6 ILE A 156 PRO A 162 -1 O ILE A 160 N LEU A 147 SHEET 5 C 6 LEU A 115 ASP A 120 -1 N MET A 116 O SER A 161 SHEET 6 C 6 PRO A 107 THR A 112 -1 N LYS A 110 O VAL A 117 SHEET 1 D 3 ILE A 90 THR A 91 0 SHEET 2 D 3 ARG A 127 VAL A 136 -1 O PHE A 134 N ILE A 90 SHEET 3 D 3 SER A 191 ALA A 194 1 O SER A 191 N ILE A 128
CRYST1 65.249 65.249 338.767 90.00 90.00 120.00 P 65 2 2 24
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.015326 0.008848 0.000000 0.00000
SCALE2 0.000000 0.017697 0.000000 0.00000
SCALE3 0.000000 0.000000 0.002952 0.00000