10 20 30 40 50 60 70 80 3CWE - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 21-APR-08 3CWE
TITLE PTP1B IN COMPLEX WITH A PHOSPHONIC ACID INHIBITOR
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TYROSINE-PROTEIN PHOSPHATASE DOMAIN; COMPND 5 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE 1B, PTP-1B; COMPND 6 EC: 3.1.3.48; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 GENE: PTPN1, PTP1B; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET
KEYWDS PHOSPHATASE, PHOSPHONATES, DIABETES, INHIBITOR, ACETYLATION, KEYWDS 2 ENDOPLASMIC RETICULUM, HYDROLASE, MEMBRANE, OXIDATION, KEYWDS 3 PHOSPHOPROTEIN, POLYMORPHISM, PROTEIN PHOSPHATASE
EXPDTA X-RAY DIFFRACTION
AUTHOR G.SCAPIN,Y.HAN,B.P.KENNEDY
REVDAT 2 24-FEB-09 3CWE 1 VERSN REVDAT 1 10-JUN-08 3CWE 0
JRNL AUTH Y.HAN,M.BELLEY,C.I.BAYLY,J.COLUCCI,C.DUFRESNE, JRNL AUTH 2 A.GIROUX,C.K.LAU,Y.LEBLANC,D.MCKAY,M.THERIEN, JRNL AUTH 3 M.C.WILSON,K.SKOREY,C.C.CHAN,G.SCAPIN,B.P.KENNEDY JRNL TITL DISCOVERY OF JRNL TITL 2 [(3-BROMO-7-CYANO-2-NAPHTHYL)(DIFLUORO) JRNL TITL 3 METHYL]PHOSPHONIC ACID, A POTENT AND ORALLY ACTIVE JRNL TITL 4 SMALL MOLECULE PTP1B INHIBITOR JRNL REF BIOORG.MED.CHEM.LETT. V. 18 3200 2008 JRNL REFN ISSN 0960-894X JRNL PMID 18477508 JRNL DOI 10.1016/J.BMCL.2008.04.064
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.39 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 61668 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3090 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8203 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2040 REMARK 3 BIN FREE R VALUE SET COUNT : 446 REMARK 3 BIN FREE R VALUE : 0.2540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2334 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 318 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.18000 REMARK 3 B22 (A**2) : -0.18000 REMARK 3 B33 (A**2) : 0.26000 REMARK 3 B12 (A**2) : -0.09000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.081 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.068 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.037 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.252 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2418 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3260 ; 1.249 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 283 ; 5.201 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 118 ;32.461 ;23.983 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 447 ;13.340 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;20.092 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 345 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1823 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1220 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1672 ; 0.313 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 265 ; 0.153 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 35 ; 0.160 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 27 ; 0.270 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1457 ; 1.011 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2304 ; 1.455 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1087 ; 2.539 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 956 ; 3.535 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2544 ; 1.899 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 321 ; 4.100 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2364 ; 2.493 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 3CWE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-APR-08. REMARK 100 THE RCSB ID CODE IS RCSB047293.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63877 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.24200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, MGCL2, HEPES, PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 284K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.80867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 69.61733 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 69.61733 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 34.80867 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 615 REMARK 465 LYS A 616 REMARK 465 GLY A 617 REMARK 465 SER A 618 REMARK 465 LEU A 619
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 614 CG SD CE
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1012 O HOH A 1043 1.96 REMARK 500 OE2 GLU A 659 O HOH A 793 2.12 REMARK 500 OD1 ASP A 681 O HOH A 1101 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1098 O HOH A 1098 4555 2.03 REMARK 500 O HOH A 1056 O HOH A 1098 4555 2.07 REMARK 500 O HOH A 1055 O HOH A 1055 4555 2.14 REMARK 500 O HOH A 1097 O HOH A 1097 4555 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 563 -73.76 -59.94 REMARK 500 CYS A 621 132.47 -179.84 REMARK 500 PHE A 682 19.65 59.18 REMARK 500 CYS A 715 -129.00 -136.61 REMARK 500 ILE A 719 -44.77 -132.59 REMARK 500 ILE A 761 119.79 73.67 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 879 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH A1015 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A1064 DISTANCE = 6.72 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 1 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 787 O REMARK 620 2 HOH A 790 O 92.8 REMARK 620 3 HOH A 785 O 92.8 87.8 REMARK 620 4 HOH A 789 O 92.7 87.6 172.9 REMARK 620 5 HOH A 786 O 81.6 171.8 98.4 86.7 REMARK 620 6 HOH A 788 O 164.0 102.2 82.3 93.5 84.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 2 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 796 O REMARK 620 2 HOH A1073 O 69.9 REMARK 620 3 HOH A 794 O 88.3 91.1 REMARK 620 4 HOH A 795 O 83.5 153.0 93.1 REMARK 620 5 HOH A 791 O 172.7 115.9 95.9 90.3 REMARK 620 6 HOH A 792 O 92.0 83.7 174.3 92.6 84.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 3 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 797 O REMARK 620 2 HOH A 800 O 96.4 REMARK 620 3 HOH A 799 O 123.5 69.3 REMARK 620 N 1 2
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 3 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 825 A 784
DBREF 3CWE A 501 783 UNP P18031 PTN1_HUMAN 1 283
SEQADV 3CWE ALA A 494 UNP P18031 EXPRESSION TAG SEQADV 3CWE ALA A 495 UNP P18031 EXPRESSION TAG SEQADV 3CWE ASP A 496 UNP P18031 EXPRESSION TAG SEQADV 3CWE LYS A 497 UNP P18031 EXPRESSION TAG SEQADV 3CWE LEU A 498 UNP P18031 EXPRESSION TAG SEQADV 3CWE GLU A 499 UNP P18031 EXPRESSION TAG SEQADV 3CWE PHE A 500 UNP P18031 EXPRESSION TAG
SEQRES 1 A 290 ALA ALA ASP LYS LEU GLU PHE MET GLU MET GLU LYS GLU SEQRES 2 A 290 PHE GLU GLN ILE ASP LYS SER GLY SER TRP ALA ALA ILE SEQRES 3 A 290 TYR GLN ASP ILE ARG HIS GLU ALA SER ASP PHE PRO CYS SEQRES 4 A 290 ARG VAL ALA LYS LEU PRO LYS ASN LYS ASN ARG ASN ARG SEQRES 5 A 290 TYR ARG ASP VAL SER PRO PHE ASP HIS SER ARG ILE LYS SEQRES 6 A 290 LEU HIS GLN GLU ASP ASN ASP TYR ILE ASN ALA SER LEU SEQRES 7 A 290 ILE LYS MET GLU GLU ALA GLN ARG SER TYR ILE LEU THR SEQRES 8 A 290 GLN GLY PRO LEU PRO ASN THR CYS GLY HIS PHE TRP GLU SEQRES 9 A 290 MET VAL TRP GLU GLN LYS SER ARG GLY VAL VAL MET LEU SEQRES 10 A 290 ASN ARG VAL MET GLU LYS GLY SER LEU LYS CYS ALA GLN SEQRES 11 A 290 TYR TRP PRO GLN LYS GLU GLU LYS GLU MET ILE PHE GLU SEQRES 12 A 290 ASP THR ASN LEU LYS LEU THR LEU ILE SER GLU ASP ILE SEQRES 13 A 290 LYS SER TYR TYR THR VAL ARG GLN LEU GLU LEU GLU ASN SEQRES 14 A 290 LEU THR THR GLN GLU THR ARG GLU ILE LEU HIS PHE HIS SEQRES 15 A 290 TYR THR THR TRP PRO ASP PHE GLY VAL PRO GLU SER PRO SEQRES 16 A 290 ALA SER PHE LEU ASN PHE LEU PHE LYS VAL ARG GLU SER SEQRES 17 A 290 GLY SER LEU SER PRO GLU HIS GLY PRO VAL VAL VAL HIS SEQRES 18 A 290 CYS SER ALA GLY ILE GLY ARG SER GLY THR PHE CYS LEU SEQRES 19 A 290 ALA ASP THR CYS LEU LEU LEU MET ASP LYS ARG LYS ASP SEQRES 20 A 290 PRO SER SER VAL ASP ILE LYS LYS VAL LEU LEU GLU MET SEQRES 21 A 290 ARG LYS PHE ARG MET GLY LEU ILE GLN THR ALA ASP GLN SEQRES 22 A 290 LEU ARG PHE SER TYR LEU ALA VAL ILE GLU GLY ALA LYS SEQRES 23 A 290 PHE ILE MET GLY
HET MG A 1 1 HET MG A 2 1 HET MG A 3 1 HET 825 A 784 30
HETNAM MG MAGNESIUM ION HETNAM 825 [{2-BROMO-4-[(2R)-3-OXO-2,3- HETNAM 2 825 DIPHENYLPROPYL]PHENYL}(DIFLUORO)METHYL]PHOSPHONIC ACID
FORMUL 2 MG 3(MG 2+) FORMUL 5 825 C22 H18 BR F2 O4 P FORMUL 6 HOH *318(H2 O)
HELIX 1 1 ALA A 495 GLY A 514 1 20 HELIX 2 2 SER A 515 ALA A 527 1 13 HELIX 3 3 LEU A 537 ASN A 544 5 8 HELIX 4 4 PHE A 552 HIS A 554 5 3 HELIX 5 5 THR A 591 LYS A 603 1 13 HELIX 6 6 SER A 687 SER A 701 1 15 HELIX 7 7 ILE A 719 ARG A 738 1 20 HELIX 8 8 ASP A 740 VAL A 744 5 5 HELIX 9 9 ASP A 745 ARG A 754 1 10 HELIX 10 10 THR A 763 GLY A 783 1 21
SHEET 1 A 9 ARG A 556 LYS A 558 0 SHEET 2 A 9 TYR A 566 MET A 574 -1 O ALA A 569 N ILE A 557 SHEET 3 A 9 ARG A 579 THR A 584 -1 O TYR A 581 N ILE A 572 SHEET 4 A 9 VAL A 711 HIS A 714 1 O VAL A 713 N ILE A 582 SHEET 5 A 9 GLY A 606 MET A 609 1 N VAL A 608 O VAL A 712 SHEET 6 A 9 THR A 668 TYR A 676 1 O PHE A 674 N VAL A 607 SHEET 7 A 9 TYR A 653 ASN A 662 -1 N THR A 654 O HIS A 675 SHEET 8 A 9 LEU A 640 ILE A 649 -1 N LYS A 641 O GLU A 661 SHEET 9 A 9 MET A 633 PHE A 635 -1 N PHE A 635 O LEU A 640
LINK MG MG A 1 O HOH A 787 1555 1555 2.07 LINK MG MG A 1 O HOH A 790 1555 1555 2.06 LINK MG MG A 1 O HOH A 785 1555 1555 2.18 LINK MG MG A 1 O HOH A 789 1555 1555 2.06 LINK MG MG A 1 O HOH A 786 1555 1555 2.04 LINK MG MG A 1 O HOH A 788 1555 1555 2.04 LINK MG MG A 2 O HOH A 796 1555 1555 2.40 LINK MG MG A 2 O HOH A1073 1555 1555 2.03 LINK MG MG A 2 O HOH A 794 1555 1555 2.09 LINK MG MG A 2 O HOH A 795 1555 1555 2.02 LINK MG MG A 2 O HOH A 791 1555 1555 2.25 LINK MG MG A 2 O HOH A 792 1555 1555 2.09 LINK MG MG A 3 O HOH A 797 1555 1555 2.13 LINK MG MG A 3 O HOH A 800 1555 1555 2.05 LINK MG MG A 3 O HOH A 799 1555 1555 2.24
SITE 1 AC1 6 HOH A 785 HOH A 786 HOH A 787 HOH A 788 SITE 2 AC1 6 HOH A 789 HOH A 790 SITE 1 AC2 6 HOH A 791 HOH A 792 HOH A 794 HOH A 795 SITE 2 AC2 6 HOH A 796 HOH A1073 SITE 1 AC3 4 HOH A 797 HOH A 798 HOH A 799 HOH A 800 SITE 1 AC4 18 GLN A 521 ASP A 522 ARG A 524 HIS A 525 SITE 2 AC4 18 TYR A 546 ASP A 548 ASP A 681 PHE A 682 SITE 3 AC4 18 CYS A 715 SER A 716 ALA A 717 GLY A 718 SITE 4 AC4 18 ILE A 719 GLY A 720 ARG A 721 GLN A 762 SITE 5 AC4 18 HOH A 820 HOH A 953
CRYST1 88.747 88.747 104.426 90.00 90.00 120.00 P 31 2 1 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011268 0.006506 0.000000 0.00000
SCALE2 0.000000 0.013011 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009576 0.00000