10 20 30 40 50 60 70 80 3AAY - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 28-NOV-09 3AAY
TITLE CRYSTAL STRUCTURE OF PROBABLE THIOSULFATE SULFURTRANSFERASE CYSA3 TITLE 2 (RV3117) FROM MYCOBACTERIUM TUBERCULOSIS: ORTHORHOMBIC FORM
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE THIOSULFATE SULFURTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RHODANESE-LIKE PROTEIN; COMPND 5 EC: 2.8.1.1; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: CYSA3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDEST-17
KEYWDS M. TUBERCULOSIS, SULFURTRANSERASE, STRUCTURAL GENOMICS, PSI, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, TB STRUCTURAL GENOMICS CONSORTIUM (TBSGC), KEYWDS 3 TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR R.SANKARANARAYANAN,S.J.WITHOLT,M.M.CHERNEY,C.R.GAREN,L.T.CHERNEY, AUTHOR 2 M.N.G.JAMES,TB STRUCTURAL GENOMICS CONSORTIUM (TBSGC)
REVDAT 2 13-JUL-11 3AAY 1 VERSN REVDAT 1 08-DEC-09 3AAY 0
JRNL AUTH R.SANKARANARAYANAN,S.J.WITHOLT,M.M.CHERNEY,C.R.GAREN, JRNL AUTH 2 L.T.CHERNEY,M.N.G.JAMES JRNL TITL THE CRYSTAL STRUCTURE OF PROBABLE THIOSULFATE JRNL TITL 2 SULFURTRANSFERASE CYSA3 (RV3117) FROM MYCOBACTERIUM JRNL TITL 3 TUBERCULOSIS JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.J.WITHOLT,R.SANKARANARAYANAN,C.R.GAREN,M.M.CHERNEY, REMARK 1 AUTH 2 L.T.CHERNEY,M.N.G.JAMES REMARK 1 TITL EXPRESSION, PURIFICATION, CRYSTALLIZATION AND PRELIMINARY REMARK 1 TITL 2 X-RAY ANALYSIS OF RV3117, A PROBABLE THIOSULFATE REMARK 1 TITL 3 SULFURTRANSFERASE (CYSA3) FROM MYCOBACTERIUM TUBERCULOSIS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 64 541 2008 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 18540071 REMARK 1 DOI 10.1107/S1744309108014449
REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0069 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 46409 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1486 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3349 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 110 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4346 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 458 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.51000 REMARK 3 B22 (A**2) : -1.18000 REMARK 3 B33 (A**2) : 1.69000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.153 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.150 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.097 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.259 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4489 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6097 ; 1.300 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 546 ; 5.970 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 223 ;36.160 ;24.081 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 712 ;13.435 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;18.000 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 646 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3482 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2736 ; 0.699 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4394 ; 1.300 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1753 ; 2.024 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1703 ; 3.322 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS THE ELECTRON DENSITY FOR THE RESIDUES 176-180 IN CHAIN REMARK 3 A IS NOT RESOLVED. HENCE, THESE RESIDUES WERE NOT MODELLED.
REMARK 4 REMARK 4 3AAY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-DEC-09. REMARK 100 THE RCSB ID CODE IS RCSB029030.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976067 REMARK 200 MONOCHROMATOR : SIDE-SCATTERING CUBEROOT I-BEAM REMARK 200 BENT SINGLE CRYSTAL; ASYMETRIC REMARK 200 CUT 12.2 DEGS. REMARK 200 OPTICS : VERTICAL FOCUSING MIRROR; SINGLE REMARK 200 CRYSTAL SI(311) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47968 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.14300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.61600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1UAR REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN CONCENTRATION 8 MG/ML IN TRIS REMARK 280 BUFFER PH 7.5, PRECIPITANT 0.1M BIS-TRIS AT PH 5.5, 3% MPD, 5MM REMARK 280 SODIUM THIOSULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.71550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.23200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.07050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.23200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.71550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.07050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 176 REMARK 465 ALA A 177 REMARK 465 HIS A 178 REMARK 465 LEU A 179 REMARK 465 PRO A 180
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 181 CG CD OE1 NE2 REMARK 470 HIS B 178 CG ND1 CD2 CE1 NE2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 182 53.74 -104.11 REMARK 500 CSO A 233 -129.52 -142.59 REMARK 500 SER A 261 -159.82 58.73 REMARK 500 VAL B 55 -56.24 -120.98 REMARK 500 CSO B 233 -128.60 -144.49 REMARK 500 SER B 261 -155.92 57.34 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 396 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A 397 DISTANCE = 5.22 ANGSTROMS REMARK 525 HOH A 399 DISTANCE = 5.66 ANGSTROMS REMARK 525 HOH A 442 DISTANCE = 5.71 ANGSTROMS REMARK 525 HOH A 490 DISTANCE = 5.36 ANGSTROMS REMARK 525 HOH A 491 DISTANCE = 5.19 ANGSTROMS REMARK 525 HOH B 412 DISTANCE = 5.67 ANGSTROMS
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 701
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3AAX RELATED DB: PDB REMARK 900 RELATED ID: RV3117 RELATED DB: TARGETDB
DBREF 3AAY A 1 277 UNP O05793 THTR_MYCTU 1 277 DBREF 3AAY B 1 277 UNP O05793 THTR_MYCTU 1 277
SEQRES 1 A 277 MET ALA ARG CYS ASP VAL LEU VAL SER ALA ASP TRP ALA SEQRES 2 A 277 GLU SER ASN LEU HIS ALA PRO LYS VAL VAL PHE VAL GLU SEQRES 3 A 277 VAL ASP GLU ASP THR SER ALA TYR ASP ARG ASP HIS ILE SEQRES 4 A 277 ALA GLY ALA ILE LYS LEU ASP TRP ARG THR ASP LEU GLN SEQRES 5 A 277 ASP PRO VAL LYS ARG ASP PHE VAL ASP ALA GLN GLN PHE SEQRES 6 A 277 SER LYS LEU LEU SER GLU ARG GLY ILE ALA ASN GLU ASP SEQRES 7 A 277 THR VAL ILE LEU TYR GLY GLY ASN ASN ASN TRP PHE ALA SEQRES 8 A 277 ALA TYR ALA TYR TRP TYR PHE LYS LEU TYR GLY HIS GLU SEQRES 9 A 277 LYS VAL LYS LEU LEU ASP GLY GLY ARG LYS LYS TRP GLU SEQRES 10 A 277 LEU ASP GLY ARG PRO LEU SER SER ASP PRO VAL SER ARG SEQRES 11 A 277 PRO VAL THR SER TYR THR ALA SER PRO PRO ASP ASN THR SEQRES 12 A 277 ILE ARG ALA PHE ARG ASP GLU VAL LEU ALA ALA ILE ASN SEQRES 13 A 277 VAL LYS ASN LEU ILE ASP VAL ARG SER PRO ASP GLU PHE SEQRES 14 A 277 SER GLY LYS ILE LEU ALA PRO ALA HIS LEU PRO GLN GLU SEQRES 15 A 277 GLN SER GLN ARG PRO GLY HIS ILE PRO GLY ALA ILE ASN SEQRES 16 A 277 VAL PRO TRP SER ARG ALA ALA ASN GLU ASP GLY THR PHE SEQRES 17 A 277 LYS SER ASP GLU GLU LEU ALA LYS LEU TYR ALA ASP ALA SEQRES 18 A 277 GLY LEU ASP ASN SER LYS GLU THR ILE ALA TYR CSO ARG SEQRES 19 A 277 ILE GLY GLU ARG SER SER HIS THR TRP PHE VAL LEU ARG SEQRES 20 A 277 GLU LEU LEU GLY HIS GLN ASN VAL LYS ASN TYR ASP GLY SEQRES 21 A 277 SER TRP THR GLU TYR GLY SER LEU VAL GLY ALA PRO ILE SEQRES 22 A 277 GLU LEU GLY SER SEQRES 1 B 277 MET ALA ARG CYS ASP VAL LEU VAL SER ALA ASP TRP ALA SEQRES 2 B 277 GLU SER ASN LEU HIS ALA PRO LYS VAL VAL PHE VAL GLU SEQRES 3 B 277 VAL ASP GLU ASP THR SER ALA TYR ASP ARG ASP HIS ILE SEQRES 4 B 277 ALA GLY ALA ILE LYS LEU ASP TRP ARG THR ASP LEU GLN SEQRES 5 B 277 ASP PRO VAL LYS ARG ASP PHE VAL ASP ALA GLN GLN PHE SEQRES 6 B 277 SER LYS LEU LEU SER GLU ARG GLY ILE ALA ASN GLU ASP SEQRES 7 B 277 THR VAL ILE LEU TYR GLY GLY ASN ASN ASN TRP PHE ALA SEQRES 8 B 277 ALA TYR ALA TYR TRP TYR PHE LYS LEU TYR GLY HIS GLU SEQRES 9 B 277 LYS VAL LYS LEU LEU ASP GLY GLY ARG LYS LYS TRP GLU SEQRES 10 B 277 LEU ASP GLY ARG PRO LEU SER SER ASP PRO VAL SER ARG SEQRES 11 B 277 PRO VAL THR SER TYR THR ALA SER PRO PRO ASP ASN THR SEQRES 12 B 277 ILE ARG ALA PHE ARG ASP GLU VAL LEU ALA ALA ILE ASN SEQRES 13 B 277 VAL LYS ASN LEU ILE ASP VAL ARG SER PRO ASP GLU PHE SEQRES 14 B 277 SER GLY LYS ILE LEU ALA PRO ALA HIS LEU PRO GLN GLU SEQRES 15 B 277 GLN SER GLN ARG PRO GLY HIS ILE PRO GLY ALA ILE ASN SEQRES 16 B 277 VAL PRO TRP SER ARG ALA ALA ASN GLU ASP GLY THR PHE SEQRES 17 B 277 LYS SER ASP GLU GLU LEU ALA LYS LEU TYR ALA ASP ALA SEQRES 18 B 277 GLY LEU ASP ASN SER LYS GLU THR ILE ALA TYR CSO ARG SEQRES 19 B 277 ILE GLY GLU ARG SER SER HIS THR TRP PHE VAL LEU ARG SEQRES 20 B 277 GLU LEU LEU GLY HIS GLN ASN VAL LYS ASN TYR ASP GLY SEQRES 21 B 277 SER TRP THR GLU TYR GLY SER LEU VAL GLY ALA PRO ILE SEQRES 22 B 277 GLU LEU GLY SER
MODRES 3AAY CSO A 233 CYS S-HYDROXYCYSTEINE MODRES 3AAY CSO B 233 CYS S-HYDROXYCYSTEINE
HET CSO A 233 7 HET CSO B 233 7 HET SO4 A 600 5 HET GOL A 700 6 HET GOL A 701 6 HET SO4 B 600 5 HET GOL B 700 6 HET GOL B 701 6
HETNAM CSO S-HYDROXYCYSTEINE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 1 CSO 2(C3 H7 N O3 S) FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 GOL 4(C3 H8 O3) FORMUL 9 HOH *458(H2 O)
HELIX 1 1 ALA A 2 VAL A 6 1 5 HELIX 2 2 SER A 9 SER A 15 1 7 HELIX 3 3 THR A 31 ASP A 37 1 7 HELIX 4 4 ASP A 61 GLY A 73 1 13 HELIX 5 5 GLY A 85 ASN A 87 5 3 HELIX 6 6 ASN A 88 TYR A 101 1 14 HELIX 7 7 GLY A 111 ASP A 119 1 9 HELIX 8 8 ASP A 141 THR A 143 5 3 HELIX 9 9 PHE A 147 ALA A 154 1 8 HELIX 10 10 SER A 165 SER A 170 1 6 HELIX 11 11 PRO A 197 ALA A 202 5 6 HELIX 12 12 SER A 210 GLY A 222 1 13 HELIX 13 13 ILE A 235 GLU A 248 1 14 HELIX 14 14 GLY A 260 GLY A 266 1 7 HELIX 15 15 ALA B 2 VAL B 6 1 5 HELIX 16 16 SER B 9 ASN B 16 1 8 HELIX 17 17 THR B 31 ASP B 37 1 7 HELIX 18 18 ASP B 61 GLY B 73 1 13 HELIX 19 19 GLY B 85 ASN B 87 5 3 HELIX 20 20 ASN B 88 TYR B 101 1 14 HELIX 21 21 GLY B 111 ASP B 119 1 9 HELIX 22 22 ASP B 141 THR B 143 5 3 HELIX 23 23 PHE B 147 ILE B 155 1 9 HELIX 24 24 SER B 165 SER B 170 1 6 HELIX 25 25 PRO B 197 ALA B 202 5 6 HELIX 26 26 SER B 210 GLY B 222 1 13 HELIX 27 27 GLY B 236 GLU B 248 1 13 HELIX 28 28 GLY B 260 GLY B 266 1 7
SHEET 1 A 5 LEU A 7 VAL A 8 0 SHEET 2 A 5 VAL A 106 LEU A 109 1 O LEU A 108 N VAL A 8 SHEET 3 A 5 THR A 79 TYR A 83 1 N LEU A 82 O LYS A 107 SHEET 4 A 5 VAL A 22 ASP A 28 1 N VAL A 23 O ILE A 81 SHEET 5 A 5 ILE A 43 ASP A 46 1 O ILE A 43 N GLU A 26 SHEET 1 B 5 ARG A 145 ALA A 146 0 SHEET 2 B 5 VAL A 255 TYR A 258 1 O ASN A 257 N ALA A 146 SHEET 3 B 5 THR A 229 TYR A 232 1 N ALA A 231 O TYR A 258 SHEET 4 B 5 ASN A 159 ASP A 162 1 N ILE A 161 O ILE A 230 SHEET 5 B 5 ILE A 194 ASN A 195 1 O ILE A 194 N ASP A 162 SHEET 1 C 5 LEU B 7 VAL B 8 0 SHEET 2 C 5 VAL B 106 LEU B 109 1 O LEU B 108 N VAL B 8 SHEET 3 C 5 THR B 79 TYR B 83 1 N LEU B 82 O LYS B 107 SHEET 4 C 5 VAL B 22 ASP B 28 1 N VAL B 25 O ILE B 81 SHEET 5 C 5 ILE B 43 ASP B 46 1 O ILE B 43 N GLU B 26 SHEET 1 D 5 ARG B 145 ALA B 146 0 SHEET 2 D 5 VAL B 255 TYR B 258 1 O ASN B 257 N ALA B 146 SHEET 3 D 5 THR B 229 TYR B 232 1 N ALA B 231 O TYR B 258 SHEET 4 D 5 ASN B 159 ASP B 162 1 N ILE B 161 O ILE B 230 SHEET 5 D 5 ILE B 194 ASN B 195 1 O ILE B 194 N ASP B 162
LINK C TYR A 232 N CSO A 233 1555 1555 1.33 LINK C CSO A 233 N ARG A 234 1555 1555 1.34 LINK C TYR B 232 N CSO B 233 1555 1555 1.34 LINK C CSO B 233 N ARG B 234 1555 1555 1.34
SITE 1 AC1 7 HIS A 252 GLN A 253 ASN A 254 HOH A 291 SITE 2 AC1 7 HOH A 292 GLN B 63 LYS B 67 SITE 1 AC2 9 LYS A 105 ILE A 155 ASN A 156 VAL A 157 SITE 2 AC2 9 LYS A 158 LEU A 160 PRO A 191 GLY A 192 SITE 3 AC2 9 LYS A 227 SITE 1 AC3 8 GLN A 52 ARG A 57 ASP A 58 TYR A 93 SITE 2 AC3 8 ILE A 235 GLY A 236 ASP A 259 ARG B 186 SITE 1 AC4 8 GLN A 63 LYS A 67 HIS B 252 GLN B 253 SITE 2 AC4 8 ASN B 254 HOH B 334 HOH B 337 HOH B 430 SITE 1 AC5 8 ILE B 155 ASN B 156 VAL B 157 LYS B 158 SITE 2 AC5 8 PRO B 191 GLY B 192 LYS B 227 HOH B 386 SITE 1 AC6 6 ARG A 186 GLN B 52 ARG B 57 ASP B 58 SITE 2 AC6 6 ILE B 235 ASP B 259
CRYST1 69.431 84.141 102.464 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.014403 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011885 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009760 0.00000