10 20 30 40 50 60 70 80 2ZVO - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION/SIGNALING PROTEIN 12-NOV-08 2ZVO
TITLE NEMO COZI DOMAIN IN COMPLEX WITH DIUBIQUITIN IN C2 SPACE TITLE 2 GROUP
COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBC PROTEIN; COMPND 3 CHAIN: A, G; COMPND 4 FRAGMENT: UBIQUITIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: NF-KAPPA-B ESSENTIAL MODULATOR; COMPND 8 CHAIN: B, D; COMPND 9 FRAGMENT: CC2-LZ, COZI DOMAIN; COMPND 10 SYNONYM: NEMO, NF-KAPPA-B ESSENTIAL MODIFIER, INHIBITOR OF COMPND 11 NUCLEAR FACTOR KAPPA-B KINASE SUBUNIT GAMMA, IKB KINASE COMPND 12 SUBUNIT GAMMA, I-KAPPA-B KINASE GAMMA, IKK-GAMMA, IKKG, COMPND 13 IKB KINASE-ASSOCIATED PROTEIN 1, IKKAP1, MFIP-3; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: DL41; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX4T1; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 12 ORGANISM_COMMON: MOUSE; SOURCE 13 ORGANISM_TAXID: 10090; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PGEX4T1
KEYWDS NF-KB SIGNALING, UBIQUITIN BINDING, COILED COIL, CYTOPLASM, KEYWDS 2 METAL-BINDING, NUCLEUS, PHOSPHOPROTEIN, TRANSCRIPTION, KEYWDS 3 TRANSCRIPTION REGULATION, UBL CONJUGATION, ZINC, ZINC- KEYWDS 4 FINGER, TRANSCRIPTION/SIGNALING PROTEIN COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR S.RAHIGHI,F.IKEDA,M.KAWASAKI,M.AKUTSU,N.SUZUKI,R.KATO, AUTHOR 2 T.KENSCHE,T.UEJIMA,S.BLOOR,D.KOMANDER,F.RANDOW,S.WAKATSUKI, AUTHOR 3 I.DIKIC
REVDAT 2 14-APR-09 2ZVO 1 JRNL REVDAT 1 24-MAR-09 2ZVO 0
JRNL AUTH S.RAHIGHI,F.IKEDA,M.KAWASAKI,M.AKUTSU,N.SUZUKI, JRNL AUTH 2 R.KATO,T.KENSCHE,T.UEJIMA,S.BLOOR,D.KOMANDER, JRNL AUTH 3 F.RANDOW,S.WAKATSUKI,I.DIKIC JRNL TITL SPECIFIC RECOGNITION OF LINEAR UBIQUITIN CHAINS BY JRNL TITL 2 NEMO IS IMPORTANT FOR NF-KAPPAB ACTIVATION JRNL REF CELL(CAMBRIDGE,MASS.) V. 136 1098 2009 JRNL REFN ISSN 0092-8674 JRNL PMID 19303852 JRNL DOI 10.1016/J.CELL.2009.03.007
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.8 REMARK 3 NUMBER OF REFLECTIONS : 11951 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.240 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 646 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.97 REMARK 3 REFLECTION IN BIN (WORKING SET) : 760 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 74.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.2980 REMARK 3 BIN FREE R VALUE SET COUNT : 29 REMARK 3 BIN FREE R VALUE : 0.4980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3795 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 174 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.48000 REMARK 3 B22 (A**2) : 1.09000 REMARK 3 B33 (A**2) : 1.32000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.57000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.488 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.355 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.759 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.909 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.897 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3833 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5149 ; 1.282 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 467 ; 5.273 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 189 ;42.788 ;26.296 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 800 ;19.649 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;23.149 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 596 ; 0.158 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2801 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1931 ; 0.245 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2610 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 170 ; 0.182 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 82 ; 0.270 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.093 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2417 ; 0.552 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3800 ; 0.958 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1530 ; 1.120 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1349 ; 1.827 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 2ZVO COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-NOV-08. REMARK 100 THE RCSB ID CODE IS RCSB028483.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL REMARK 200 DATA SCALING SOFTWARE : HKL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15653 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.16200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.4620 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 53.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : 0.23600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, SITTING DROP
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 65.43050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.18600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 65.43050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 49.18600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 LEU A 149 REMARK 465 ARG A 150 REMARK 465 GLY A 151 REMARK 465 GLY A 152 REMARK 465 GLY G -1 REMARK 465 SER G 0 REMARK 465 LEU G 147 REMARK 465 ARG G 148 REMARK 465 LEU G 149 REMARK 465 ARG G 150 REMARK 465 GLY G 151 REMARK 465 GLY G 152 REMARK 465 GLY B 248 REMARK 465 SER B 249 REMARK 465 VAL B 338 REMARK 465 GLY B 339 REMARK 465 GLY D 248 REMARK 465 SER D 249 REMARK 465 VAL D 338 REMARK 465 GLY D 339
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 309 OE2 GLU D 308 2.15 REMARK 500 O GLY A 75 O HOH A 153 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 1 -174.63 -58.09 REMARK 500 LYS A 11 98.70 84.82 REMARK 500 LEU A 84 28.21 -69.87 REMARK 500 ALA A 122 74.48 43.20 REMARK 500 ASN A 136 63.09 21.03 REMARK 500 LYS G 11 83.37 60.63 REMARK 500 GLU G 64 6.13 55.51 REMARK 500 PRO G 95 49.91 -68.23 REMARK 500 SER G 96 -24.35 -152.62 REMARK 500 ALA G 122 73.60 45.99 REMARK 500 LYS G 124 100.37 76.74 REMARK 500 MET B 251 -18.97 60.17 REMARK 500 MET D 251 -9.39 -56.92 REMARK 500 LEU D 253 33.30 -81.75 REMARK 500 ALA D 285 -39.38 -39.01 REMARK 500 GLN D 328 5.33 -58.67 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 140 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH A 225 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH B 347 DISTANCE = 5.95 ANGSTROMS
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ZVN RELATED DB: PDB REMARK 900 RELATED ID: 3F89 RELATED DB: PDB
DBREF 2ZVO A 1 152 UNP Q96C32 Q96C32_HUMAN 1 152 DBREF 2ZVO G 1 152 UNP Q96C32 Q96C32_HUMAN 1 152 DBREF 2ZVO B 250 339 UNP O88522 NEMO_MOUSE 250 339 DBREF 2ZVO D 250 339 UNP O88522 NEMO_MOUSE 250 339
SEQADV 2ZVO GLY A -1 UNP Q96C32 EXPRESSION TAG SEQADV 2ZVO SER A 0 UNP Q96C32 EXPRESSION TAG SEQADV 2ZVO GLY G -1 UNP Q96C32 EXPRESSION TAG SEQADV 2ZVO SER G 0 UNP Q96C32 EXPRESSION TAG SEQADV 2ZVO GLY B 248 UNP O88522 EXPRESSION TAG SEQADV 2ZVO SER B 249 UNP O88522 EXPRESSION TAG SEQADV 2ZVO ALA B 282 UNP O88522 GLU 282 ENGINEERED SEQADV 2ZVO ALA B 285 UNP O88522 LYS 285 ENGINEERED SEQADV 2ZVO GLY D 248 UNP O88522 EXPRESSION TAG SEQADV 2ZVO SER D 249 UNP O88522 EXPRESSION TAG SEQADV 2ZVO ALA D 282 UNP O88522 GLU 282 ENGINEERED SEQADV 2ZVO ALA D 285 UNP O88522 LYS 285 ENGINEERED
SEQRES 1 A 154 GLY SER MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS SEQRES 2 A 154 THR ILE THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU SEQRES 3 A 154 ASN VAL LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO SEQRES 4 A 154 PRO ASP GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU SEQRES 5 A 154 GLU ASP GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS SEQRES 6 A 154 GLU SER THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY SEQRES 7 A 154 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 8 A 154 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 9 A 154 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 10 A 154 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 11 A 154 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 12 A 154 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY SEQRES 1 G 154 GLY SER MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS SEQRES 2 G 154 THR ILE THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU SEQRES 3 G 154 ASN VAL LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO SEQRES 4 G 154 PRO ASP GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU SEQRES 5 G 154 GLU ASP GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS SEQRES 6 G 154 GLU SER THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY SEQRES 7 G 154 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 8 G 154 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 9 G 154 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 10 G 154 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 11 G 154 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 12 G 154 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY SEQRES 1 B 92 GLY SER GLY MET GLN LEU GLU ASP LEU ARG GLN GLN LEU SEQRES 2 B 92 GLN GLN ALA GLU GLU ALA LEU VAL ALA LYS GLN GLU LEU SEQRES 3 B 92 ILE ASP LYS LEU LYS GLU GLU ALA ALA GLN HIS ALA ILE SEQRES 4 B 92 VAL MET GLU THR VAL PRO VAL LEU LYS ALA GLN ALA ASP SEQRES 5 B 92 ILE TYR LYS ALA ASP PHE GLN ALA GLU ARG HIS ALA ARG SEQRES 6 B 92 GLU LYS LEU VAL GLU LYS LYS GLU TYR LEU GLN GLU GLN SEQRES 7 B 92 LEU GLU GLN LEU GLN ARG GLU PHE ASN LYS LEU LYS VAL SEQRES 8 B 92 GLY SEQRES 1 D 92 GLY SER GLY MET GLN LEU GLU ASP LEU ARG GLN GLN LEU SEQRES 2 D 92 GLN GLN ALA GLU GLU ALA LEU VAL ALA LYS GLN GLU LEU SEQRES 3 D 92 ILE ASP LYS LEU LYS GLU GLU ALA ALA GLN HIS ALA ILE SEQRES 4 D 92 VAL MET GLU THR VAL PRO VAL LEU LYS ALA GLN ALA ASP SEQRES 5 D 92 ILE TYR LYS ALA ASP PHE GLN ALA GLU ARG HIS ALA ARG SEQRES 6 D 92 GLU LYS LEU VAL GLU LYS LYS GLU TYR LEU GLN GLU GLN SEQRES 7 D 92 LEU GLU GLN LEU GLN ARG GLU PHE ASN LYS LEU LYS VAL SEQRES 8 D 92 GLY
FORMUL 5 HOH *174(H2 O)
HELIX 1 1 THR A 22 GLY A 35 1 14 HELIX 2 2 PRO A 37 ASP A 39 5 3 HELIX 3 3 LEU A 56 ASN A 60 5 5 HELIX 4 4 ILE A 99 GLY A 111 1 13 HELIX 5 5 PRO A 113 ASP A 115 5 3 HELIX 6 6 LEU A 132 ASN A 136 5 5 HELIX 7 7 THR G 22 GLY G 35 1 14 HELIX 8 8 PRO G 37 ASP G 39 5 3 HELIX 9 9 THR G 98 GLY G 111 1 14 HELIX 10 10 PRO G 113 GLN G 117 5 5 HELIX 11 11 LEU B 253 GLU B 289 1 37 HELIX 12 12 THR B 290 LYS B 337 1 48 HELIX 13 13 MET D 251 GLU D 289 1 39 HELIX 14 14 GLU D 289 GLN D 325 1 37 HELIX 15 15 LEU D 326 LEU D 336 1 11
SHEET 1 A 5 THR A 12 GLU A 16 0 SHEET 2 A 5 GLN A 2 LYS A 6 -1 N VAL A 5 O ILE A 13 SHEET 3 A 5 THR A 66 LEU A 71 1 O LEU A 67 N PHE A 4 SHEET 4 A 5 GLN A 41 PHE A 45 -1 N ARG A 42 O VAL A 70 SHEET 5 A 5 LYS A 48 GLN A 49 -1 O LYS A 48 N PHE A 45 SHEET 1 B 5 THR A 88 VAL A 93 0 SHEET 2 B 5 MET A 77 THR A 83 -1 N VAL A 81 O ILE A 89 SHEET 3 B 5 THR A 142 LEU A 147 1 O LEU A 143 N LYS A 82 SHEET 4 B 5 GLN A 117 PHE A 121 -1 N ARG A 118 O VAL A 146 SHEET 5 B 5 LYS A 124 GLN A 125 -1 O LYS A 124 N PHE A 121 SHEET 1 C 5 THR G 12 GLU G 16 0 SHEET 2 C 5 GLN G 2 THR G 7 -1 N VAL G 5 O ILE G 13 SHEET 3 C 5 THR G 66 LEU G 71 1 O LEU G 67 N PHE G 4 SHEET 4 C 5 GLN G 41 PHE G 45 -1 N ILE G 44 O HIS G 68 SHEET 5 C 5 LYS G 48 GLN G 49 -1 O LYS G 48 N PHE G 45 SHEET 1 D 4 THR G 88 VAL G 93 0 SHEET 2 D 4 MET G 77 LYS G 82 -1 N ILE G 79 O LEU G 91 SHEET 3 D 4 THR G 142 VAL G 146 1 O LEU G 143 N PHE G 80 SHEET 4 D 4 ARG G 118 ILE G 120 -1 N ARG G 118 O VAL G 146
CRYST1 130.861 98.372 50.616 90.00 101.96 90.00 C 1 2 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.007642 0.000000 0.001619 0.00000
SCALE2 0.000000 0.010165 0.000000 0.00000
SCALE3 0.000000 0.000000 0.020195 0.00000