10 20 30 40 50 60 70 80 2ZV7 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 04-NOV-08 2ZV7
TITLE LYN TYROSINE KINASE DOMAIN, APO FORM
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE LYN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 239-512; COMPND 5 EC: 2.7.10.2; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS
KEYWDS LYN KINASE, ALTERNATIVE SPLICING, ATP-BINDING, KINASE, KEYWDS 2 LIPOPROTEIN, MYRISTATE, NUCLEOTIDE-BINDING, PALMITATE, KEYWDS 3 PHOSPHOPROTEIN, PROTO-ONCOGENE, SH2 DOMAIN, SH3 DOMAIN, KEYWDS 4 TRANSFERASE, TYROSINE-PROTEIN KINASE
EXPDTA X-RAY DIFFRACTION
AUTHOR N.K.WILLIAMS,J.ROSSJOHN
REVDAT 3 13-JAN-09 2ZV7 1 JRNL VERSN REVDAT 2 18-NOV-08 2ZV7 1 AUTHOR REVDAT 1 11-NOV-08 2ZV7 0
JRNL AUTH N.K.WILLIAMS,I.S.LUCET,S.P.KLINKEN,E.INGLEY, JRNL AUTH 2 J.ROSSJOHN JRNL TITL CRYSTAL STRUCTURES OF THE LYN PROTEIN TYROSINE JRNL TITL 2 KINASE DOMAIN IN ITS APO- AND INHIBITOR-BOUND STATE JRNL REF J.BIOL.CHEM. V. 284 284 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 18984583 JRNL DOI 10.1074/JBC.M807850200
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 10743 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 516 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 811 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.4110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2044 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 14 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : 0.26000 REMARK 3 B33 (A**2) : -0.38000 REMARK 3 B12 (A**2) : 0.13000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.479 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.265 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.237 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.825 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2101 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2839 ; 1.035 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 257 ; 5.296 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 87 ;37.410 ;24.023 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 376 ;17.137 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;14.197 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 312 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1556 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 956 ; 0.192 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1430 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 49 ; 0.117 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 18 ; 0.141 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.201 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1329 ; 0.853 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2073 ; 1.561 ; 5.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 905 ; 2.395 ; 7.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 766 ; 3.460 ;10.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 2ZV7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-NOV-08. REMARK 100 THE RCSB ID CODE IS RCSB028466.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54180 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11259 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 63.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1QPD REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23% POLYETHYLENE GLYCOL 3350, 0.1M REMARK 280 NACL, 0.1M NA-HEPES PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 63.65500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.75123 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 17.94533 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 63.65500 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 36.75123 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 17.94533 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 63.65500 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 36.75123 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 17.94533 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 73.50246 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 35.89067 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 73.50246 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 35.89067 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 73.50246 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 35.89067 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 234 REMARK 465 ALA A 235 REMARK 465 MET A 236 REMARK 465 ASP A 237 REMARK 465 GLU A 393 REMARK 465 ASP A 394 REMARK 465 ASN A 395 REMARK 465 GLU A 396 REMARK 465 TYR A 397 REMARK 465 THR A 398 REMARK 465 ALA A 399 REMARK 465 THR A 502 REMARK 465 ALA A 503 REMARK 465 THR A 504 REMARK 465 GLU A 505 REMARK 465 GLY A 506 REMARK 465 GLN A 507 REMARK 465 TYR A 508 REMARK 465 GLN A 509 REMARK 465 GLN A 510 REMARK 465 GLN A 511 REMARK 465 PRO A 512
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 257 CG CD OE1 NE2 REMARK 470 ARG A 400 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 401 CG CD OE1 OE2 REMARK 470 LYS A 477 CG CD CE NZ
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 255 -155.09 -99.84 REMARK 500 ASN A 268 -43.07 65.30 REMARK 500 THR A 281 -79.40 -56.16 REMARK 500 ALA A 307 176.05 178.75 REMARK 500 ARG A 366 -7.60 78.56 REMARK 500 ALA A 384 -169.06 -124.38 REMARK 500 ASP A 385 84.01 50.42 REMARK 500 GLU A 401 56.64 29.74 REMARK 500 PHE A 500 -72.16 -125.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 401 GLY A 402 134.35 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ZV8 RELATED DB: PDB REMARK 900 LYN PROTEIN TYROSINE KINASE DOMAIN-AMP-PNP COMPLEX REMARK 900 RELATED ID: 2ZV9 RELATED DB: PDB REMARK 900 LYN PROTEIN TYROSINE KINASE DOMAIN-PP2 COMPLEX REMARK 900 RELATED ID: 2ZVA RELATED DB: PDB REMARK 900 LYN PROTEIN TYROSINE KINASE DOMAIN-DASATINIB COMPLEX
REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE IS BASED ON REFERENCE 1 IN THE DATABASE, REMARK 999 LYN_MOUSE.
DBREF 2ZV7 A 239 512 UNP P25911 LYN_MOUSE 239 512
SEQADV 2ZV7 GLY A 234 UNP P25911 EXPRESSION TAG SEQADV 2ZV7 ALA A 235 UNP P25911 EXPRESSION TAG SEQADV 2ZV7 MET A 236 UNP P25911 EXPRESSION TAG SEQADV 2ZV7 ASP A 237 UNP P25911 EXPRESSION TAG SEQADV 2ZV7 PRO A 238 UNP P25911 EXPRESSION TAG
SEQRES 1 A 279 GLY ALA MET ASP PRO ALA TRP GLU ILE PRO ARG GLU SER SEQRES 2 A 279 ILE LYS LEU VAL LYS LYS LEU GLY ALA GLY GLN PHE GLY SEQRES 3 A 279 GLU VAL TRP MET GLY TYR TYR ASN ASN SER THR LYS VAL SEQRES 4 A 279 ALA VAL LYS THR LEU LYS PRO GLY THR MET SER VAL GLN SEQRES 5 A 279 ALA PHE LEU GLU GLU ALA ASN LEU MET LYS THR LEU GLN SEQRES 6 A 279 HIS ASP LYS LEU VAL ARG LEU TYR ALA VAL VAL THR LYS SEQRES 7 A 279 GLU GLU PRO ILE TYR ILE ILE THR GLU PHE MET ALA LYS SEQRES 8 A 279 GLY SER LEU LEU ASP PHE LEU LYS SER ASP GLU GLY GLY SEQRES 9 A 279 LYS VAL LEU LEU PRO LYS LEU ILE ASP PHE SER ALA GLN SEQRES 10 A 279 ILE ALA GLU GLY MET ALA TYR ILE GLU ARG LYS ASN TYR SEQRES 11 A 279 ILE HIS ARG ASP LEU ARG ALA ALA ASN VAL LEU VAL SER SEQRES 12 A 279 GLU SER LEU MET CYS LYS ILE ALA ASP PHE GLY LEU ALA SEQRES 13 A 279 ARG VAL ILE GLU ASP ASN GLU TYR THR ALA ARG GLU GLY SEQRES 14 A 279 ALA LYS PHE PRO ILE LYS TRP THR ALA PRO GLU ALA ILE SEQRES 15 A 279 ASN PHE GLY CYS PHE THR ILE LYS SER ASN VAL TRP SER SEQRES 16 A 279 PHE GLY ILE LEU LEU TYR GLU ILE VAL THR TYR GLY LYS SEQRES 17 A 279 ILE PRO TYR PRO GLY ARG THR ASN ALA ASP VAL MET SER SEQRES 18 A 279 ALA LEU SER GLN GLY TYR ARG MET PRO ARG MET GLU ASN SEQRES 19 A 279 CYS PRO ASP GLU LEU TYR ASP ILE MET LYS MET CYS TRP SEQRES 20 A 279 LYS GLU LYS ALA GLU GLU ARG PRO THR PHE ASP TYR LEU SEQRES 21 A 279 GLN SER VAL LEU ASP ASP PHE TYR THR ALA THR GLU GLY SEQRES 22 A 279 GLN TYR GLN GLN GLN PRO
FORMUL 2 HOH *14(H2 O)
HELIX 1 1 PRO A 243 GLU A 245 5 3 HELIX 2 2 SER A 283 LYS A 295 1 13 HELIX 3 3 SER A 326 SER A 333 1 8 HELIX 4 4 GLU A 335 VAL A 339 5 5 HELIX 5 5 LEU A 340 LYS A 361 1 22 HELIX 6 6 ARG A 369 ALA A 371 5 3 HELIX 7 7 PRO A 406 THR A 410 5 5 HELIX 8 8 ALA A 411 GLY A 418 1 8 HELIX 9 9 THR A 421 TYR A 439 1 19 HELIX 10 10 THR A 448 LEU A 456 1 9 HELIX 11 11 SER A 457 GLY A 459 5 3 HELIX 12 12 PRO A 469 TRP A 480 1 12 HELIX 13 13 LYS A 483 ARG A 487 5 5 HELIX 14 14 THR A 489 ASP A 499 1 11
SHEET 1 A 5 ILE A 247 GLY A 254 0 SHEET 2 A 5 GLY A 259 TYR A 266 -1 O VAL A 261 N LEU A 253 SHEET 3 A 5 THR A 270 LEU A 277 -1 O VAL A 274 N TRP A 262 SHEET 4 A 5 TYR A 316 GLU A 320 -1 O THR A 319 N ALA A 273 SHEET 5 A 5 LEU A 305 VAL A 309 -1 N TYR A 306 O ILE A 318 SHEET 1 B 2 TYR A 363 ILE A 364 0 SHEET 2 B 2 ARG A 390 VAL A 391 -1 O ARG A 390 N ILE A 364 SHEET 1 C 2 VAL A 373 VAL A 375 0 SHEET 2 C 2 CYS A 381 ILE A 383 -1 O LYS A 382 N LEU A 374
CRYST1 127.310 127.310 53.836 90.00 90.00 120.00 H 3 9
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.007855 0.004535 0.000000 0.00000
SCALE2 0.000000 0.009070 0.000000 0.00000
SCALE3 0.000000 0.000000 0.018575 0.00000