10 20 30 40 50 60 70 80 2ZSL - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ISOMERASE 17-SEP-08 2ZSL
TITLE CRYSTAL STRUCTURE OF GLUTAMATE-1-SEMIALDEHYDE 2,1- TITLE 2 AMINOMUTASE FROM AEROPYRUM PERNIX
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GSA, GLUTAMATE-1-SEMIALDEHYDE AMINOTRANSFERASE, COMPND 5 GSA-AT; COMPND 6 EC: 5.4.3.8; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEROPYRUM PERNIX; SOURCE 3 ORGANISM_TAXID: 56636; SOURCE 4 STRAIN: K1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-HISTEV
KEYWDS PLP DEPENDENT ENZYME, GSA, CYTOPLASM, ISOMERASE, PORPHYRIN KEYWDS 2 BIOSYNTHESIS, PYRIDOXAL PHOSPHATE
EXPDTA X-RAY DIFFRACTION
AUTHOR H.MIZUTANI,N.KUNISHIMA
REVDAT 2 24-FEB-09 2ZSL 1 VERSN REVDAT 1 21-OCT-08 2ZSL 0
JRNL AUTH H.MIZUTANI,N.KUNISHIMA JRNL TITL CRYSTAL STRUCTURE OF GLUTAMATE-1-SEMIALDEHYDE JRNL TITL 2 2,1-AMINOMUTASE FROM AEROPYRUM PERNIX JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2619579.690 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 51078 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2542 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.81 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7946 REMARK 3 BIN R VALUE (WORKING SET) : 0.1970 REMARK 3 BIN FREE R VALUE : 0.2140 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 420 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3183 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 426 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.34000 REMARK 3 B22 (A**2) : -2.31000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.15 REMARK 3 ESD FROM SIGMAA (A) : 0.10 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.18 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.11 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.30 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.80 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.910 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.340 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.970 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.010 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 54.20 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : PMP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : PMP.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2ZSL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-SEP-08. REMARK 100 THE RCSB ID CODE IS RCSB028373.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : BENDING MAGNET REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS V REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51120 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.12100 REMARK 200 R SYM (I) : 0.11400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.43800 REMARK 200 R SYM FOR SHELL (I) : 0.40000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.920 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2E7U REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25MM KH2PO4, 5% W/V PEG 8000, PH REMARK 280 4.7, MICROBATCH, TEMPERATURE 295K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.17300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.17300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.50300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.92100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 30.50300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.92100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 74.17300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.50300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.92100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 74.17300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 30.50300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 50.92100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 74.17300
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 855 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 856 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 857 LIES ON A SPECIAL POSITION.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 HIS A 2 REMARK 465 MET A 3 REMARK 465 ASP A 4 REMARK 465 VAL A 5 REMARK 465 LEU A 6 REMARK 465 ALA A 7 REMARK 465 SER A 8 REMARK 465 SER A 161 REMARK 465 ALA A 162 REMARK 465 ALA A 163 REMARK 465 ALA A 164 REMARK 465 HIS A 165 REMARK 465 TYR A 166
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 65 38.32 70.44 REMARK 500 LYS A 110 72.63 -164.24 REMARK 500 VAL A 118 -165.73 -125.81 REMARK 500 SER A 151 59.40 -98.68 REMARK 500 LEU A 156 59.54 -104.56 REMARK 500 LEU A 251 56.70 -91.18 REMARK 500 LYS A 271 -96.85 37.57 REMARK 500 PRO A 325 43.33 -75.77 REMARK 500 GLU A 358 -110.64 55.77 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PMP A 501
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ZSM RELATED DB: PDB REMARK 900 THE SAME PROTEIN(ANOTHER CRYSTAL FORM, HEXAGONAL FORM)
DBREF 2ZSL A 7 434 UNP Q9Y9I9 GSA_AERPE 2 429
SEQADV 2ZSL GLY A 1 UNP Q9Y9I9 EXPRESSION TAG SEQADV 2ZSL HIS A 2 UNP Q9Y9I9 EXPRESSION TAG SEQADV 2ZSL MET A 3 UNP Q9Y9I9 EXPRESSION TAG SEQADV 2ZSL ASP A 4 UNP Q9Y9I9 EXPRESSION TAG SEQADV 2ZSL VAL A 5 UNP Q9Y9I9 EXPRESSION TAG SEQADV 2ZSL LEU A 6 UNP Q9Y9I9 EXPRESSION TAG
SEQRES 1 A 434 GLY HIS MET ASP VAL LEU ALA SER GLY GLU LYS SER ARG SEQRES 2 A 434 MET LEU PHE GLU ARG THR LYS GLU LEU PHE PRO GLY GLY SEQRES 3 A 434 VAL ASN SER PRO VAL ARG ALA ALA VAL LYS PRO TYR PRO SEQRES 4 A 434 PHE TYR VAL LYS ARG GLY GLU GLY ALA TYR LEU TYR THR SEQRES 5 A 434 VAL ASP GLY ALA ARG ILE VAL ASP LEU VAL LEU ALA TYR SEQRES 6 A 434 GLY PRO LEU ILE LEU GLY HIS LYS HIS PRO ARG VAL LEU SEQRES 7 A 434 GLU ALA VAL GLU GLU ALA LEU ALA ARG GLY TRP LEU TYR SEQRES 8 A 434 GLY ALA PRO GLY GLU ALA GLU VAL LEU LEU ALA GLU LYS SEQRES 9 A 434 ILE LEU GLY TYR VAL LYS ARG GLY GLY MET ILE ARG PHE SEQRES 10 A 434 VAL ASN SER GLY THR GLU ALA THR MET THR ALA ILE ARG SEQRES 11 A 434 LEU ALA ARG GLY TYR THR GLY ARG ASP LEU ILE LEU LYS SEQRES 12 A 434 PHE ASP GLY CYS TYR HIS GLY SER HIS ASP ALA VAL LEU SEQRES 13 A 434 VAL ALA ALA GLY SER ALA ALA ALA HIS TYR GLY VAL PRO SEQRES 14 A 434 THR SER ALA GLY VAL PRO GLU ALA VAL ALA ARG LEU THR SEQRES 15 A 434 LEU VAL THR PRO TYR ASN ASP VAL GLU ALA LEU GLU ARG SEQRES 16 A 434 VAL PHE ALA GLU TYR GLY ASP ARG ILE ALA GLY VAL ILE SEQRES 17 A 434 VAL GLU PRO VAL ILE ALA ASN ALA GLY VAL ILE PRO PRO SEQRES 18 A 434 ARG ARG GLU PHE LEU ALA ALA LEU GLN ARG LEU SER ARG SEQRES 19 A 434 GLU SER GLY ALA LEU LEU ILE LEU ASP GLU VAL VAL THR SEQRES 20 A 434 GLY PHE ARG LEU GLY LEU GLU GLY ALA GLN GLY TYR PHE SEQRES 21 A 434 ASN ILE GLU GLY ASP ILE ILE VAL LEU GLY LYS ILE ILE SEQRES 22 A 434 GLY GLY GLY PHE PRO VAL GLY ALA VAL ALA GLY SER ARG SEQRES 23 A 434 GLU VAL MET SER LEU LEU THR PRO GLN GLY LYS VAL PHE SEQRES 24 A 434 ASN ALA GLY THR PHE ASN ALA HIS PRO ILE THR MET ALA SEQRES 25 A 434 ALA GLY LEU ALA THR LEU LYS ALA LEU GLU GLU GLU PRO SEQRES 26 A 434 VAL TYR SER VAL SER ARG GLU ALA ALA LYS ALA LEU GLU SEQRES 27 A 434 GLU ALA ALA SER GLU VAL LEU ASP ARG THR GLY LEU PRO SEQRES 28 A 434 TYR THR ILE ASN ARG VAL GLU SER MET MET GLN LEU PHE SEQRES 29 A 434 ILE GLY VAL GLU GLU VAL SER ASN ALA ALA GLN ALA ARG SEQRES 30 A 434 LYS ALA ASP LYS LYS PHE TYR VAL LYS LEU HIS GLU GLU SEQRES 31 A 434 MET LEU ARG ARG GLY VAL PHE ILE ALA PRO SER ASN LEU SEQRES 32 A 434 GLU ALA VAL PHE THR GLY LEU PRO HIS GLN GLY GLU ALA SEQRES 33 A 434 LEU GLU ILE ALA VAL GLU GLY LEU ARG SER SER LEU LYS SEQRES 34 A 434 THR VAL LEU GLY SER
HET PMP A 501 16
HETNAM PMP 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
HETSYN PMP PYRIDOXAMINE-5'-PHOSPHATE
FORMUL 2 PMP C8 H13 N2 O5 P FORMUL 3 HOH *426(H2 O)
HELIX 1 1 GLY A 9 LYS A 20 1 12 HELIX 2 2 GLU A 21 LEU A 22 5 2 HELIX 3 3 PHE A 23 VAL A 27 5 5 HELIX 4 4 SER A 29 VAL A 35 5 7 HELIX 5 5 VAL A 62 GLY A 66 5 5 HELIX 6 6 HIS A 74 ARG A 87 1 14 HELIX 7 7 GLY A 95 LYS A 110 1 16 HELIX 8 8 SER A 120 GLY A 137 1 18 HELIX 9 9 HIS A 152 VAL A 155 5 4 HELIX 10 10 PRO A 175 ARG A 180 1 6 HELIX 11 11 ASP A 189 GLY A 201 1 13 HELIX 12 12 ARG A 222 GLY A 237 1 16 HELIX 13 13 GLU A 254 ASN A 261 1 8 HELIX 14 14 ILE A 272 GLY A 275 5 4 HELIX 15 15 SER A 285 SER A 290 1 6 HELIX 16 16 HIS A 307 GLU A 324 1 18 HELIX 17 17 PRO A 325 GLY A 349 1 25 HELIX 18 18 ASN A 372 ARG A 377 1 6 HELIX 19 19 ASP A 380 ARG A 394 1 15 HELIX 20 20 GLN A 413 GLY A 433 1 21
SHEET 1 A 4 VAL A 42 GLU A 46 0 SHEET 2 A 4 TYR A 49 THR A 52 -1 O TYR A 51 N LYS A 43 SHEET 3 A 4 ARG A 57 ASP A 60 -1 O ILE A 58 N LEU A 50 SHEET 4 A 4 VAL A 396 PHE A 397 1 O PHE A 397 N VAL A 59 SHEET 1 B 7 MET A 114 VAL A 118 0 SHEET 2 B 7 GLY A 280 GLY A 284 -1 O GLY A 280 N VAL A 118 SHEET 3 B 7 ILE A 266 GLY A 270 -1 N ILE A 267 O ALA A 283 SHEET 4 B 7 LEU A 239 GLU A 244 1 N LEU A 242 O VAL A 268 SHEET 5 B 7 ILE A 204 VAL A 209 1 N VAL A 207 O ILE A 241 SHEET 6 B 7 LEU A 140 ASP A 145 1 N LEU A 140 O ALA A 205 SHEET 7 B 7 THR A 182 PRO A 186 1 O LEU A 183 N ILE A 141 SHEET 1 C 2 VAL A 157 ALA A 158 0 SHEET 2 C 2 VAL A 168 PRO A 169 -1 O VAL A 168 N ALA A 158 SHEET 1 D 3 TYR A 352 VAL A 357 0 SHEET 2 D 3 MET A 360 ILE A 365 -1 O PHE A 364 N THR A 353 SHEET 3 D 3 VAL A 406 PHE A 407 -1 O VAL A 406 N MET A 361
CISPEP 1 LYS A 36 PRO A 37 0 -0.23 CISPEP 2 THR A 293 PRO A 294 0 0.53
SITE 1 AC1 19 SER A 120 GLY A 121 THR A 122 TYR A 148 SITE 2 AC1 19 HIS A 149 GLU A 210 ASN A 215 ASP A 243 SITE 3 AC1 19 VAL A 245 VAL A 246 LYS A 271 GLY A 302 SITE 4 AC1 19 THR A 303 PHE A 304 HOH A 520 HOH A 551 SITE 5 AC1 19 HOH A 602 HOH A 714 HOH A 749
CRYST1 61.006 101.842 148.346 90.00 90.00 90.00 C 2 2 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016392 0.000000 0.000000 0.00000
SCALE2 0.000000 0.009819 0.000000 0.00000
SCALE3 0.000000 0.000000 0.006741 0.00000