10 20 30 40 50 60 70 80 2ZMZ - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE/METAL TRANSPORT 21-APR-08 2ZMZ
TITLE THE 1.37-A CRYSTAL STRUCTURE OF THE HYDROXYLAMINE-INDUCED TITLE 2 DEOXY-FORM OF THE COPPER-BOUND TYROSINASE IN COMPLEX WITH TITLE 3 A CADDIE PROTEIN FROM STREPTOMYCES CASTANEOGLOBISPORUS
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.14.18.1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CADDIE; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: CADDIE PROTEIN ORF378; COMPND 10 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES CASTANEOGLOBISPORUS; SOURCE 3 ORGANISM_TAXID: 79261; SOURCE 4 STRAIN: HUT 6202; SOURCE 5 GENE: TYRC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-MEL2; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: STREPTOMYCES CASTANEOGLOBISPORUS; SOURCE 13 ORGANISM_TAXID: 79261; SOURCE 14 STRAIN: HUT 6202; SOURCE 15 GENE: ORF378; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET-MEL2
KEYWDS TYROSINASE, BINARY COMPLEX, TYPE-3 COPPER, DIOXYGEN, COPPER KEYWDS 2 TRANSFER, OXIDOREDUCTASE/METAL TRANSPORT COMPLEX, COPPER, KEYWDS 3 METAL-BINDING
EXPDTA X-RAY DIFFRACTION
AUTHOR Y.MATOBA,M.SUGIYAMA
REVDAT 1 05-MAY-09 2ZMZ 0
JRNL AUTH Y.MATOBA,H.YOSHITSU,H.-J.JEON,K.ODA,M.NODA, JRNL AUTH 2 T.KUMAGAI,M.SUGIYAMA JRNL TITL X-RAY SNAPSHOTS OF A HYDROXYLATION MECHANISM OF JRNL TITL 2 TYROSINASE JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Y.MATOBA,T.KUMAGAI,A.YAMAMOTO,H.YOSHITSU,M.SUGIYAMA REMARK 1 TITL CRYSTALLOGRAPHIC EVIDENCE THAT THE DINUCLEAR REMARK 1 TITL 2 COPPER CENTER OF TYROSINASE IS FLEXIBLE DURING REMARK 1 TITL 3 CATALYSIS REMARK 1 REF J.BIOL.CHEM. V. 281 8981 2006 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 16436386 REMARK 1 DOI 10.1074/JBC.M509785200
REMARK 2 REMARK 2 RESOLUTION. 1.37 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.3 REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.187 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.186 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 3330 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 65600 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.179 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.179 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 5.400 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 2978 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 55578 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2872 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 395 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 3212.01 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 0.00 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 15 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 13244 REMARK 3 NUMBER OF RESTRAINTS : 12185 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 ANGLE DISTANCES (A) : 0.027 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.028 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.054 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.059 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.016 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.000 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.035 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2ZMZ COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-APR-08. REMARK 100 THE RCSB ID CODE IS RCSB028175.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68658 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.370 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : 0.05300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.42400 REMARK 200 R SYM FOR SHELL (I) : 0.42400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1WX3 REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, SODIUM NITRATE, HEPES , REMARK 280 PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 32.59000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.01500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.59000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.01500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 696 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 703 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 704 LIES ON A SPECIAL POSITION.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 275 REMARK 465 HIS A 276 REMARK 465 HIS A 277 REMARK 465 HIS A 278 REMARK 465 HIS A 279 REMARK 465 HIS A 280 REMARK 465 HIS A 281 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 GLU B 3 REMARK 465 ILE B 4 REMARK 465 THR B 5 REMARK 465 ARG B 6 REMARK 465 ARG B 7 REMARK 465 ARG B 8 REMARK 465 ALA B 9 REMARK 465 LEU B 10 REMARK 465 THR B 11 REMARK 465 ALA B 12 REMARK 465 ALA B 13 REMARK 465 ALA B 14 REMARK 465 ALA B 15 REMARK 465 VAL B 16 REMARK 465 ALA B 17 REMARK 465 ALA B 18 REMARK 465 THR B 19 REMARK 465 ALA B 20 REMARK 465 SER B 21 REMARK 465 ALA B 22 REMARK 465 ALA B 23 REMARK 465 VAL B 24 REMARK 465 THR B 25 REMARK 465 LEU B 26 REMARK 465 ALA B 27 REMARK 465 ALA B 28 REMARK 465 PRO B 29 REMARK 465 ALA B 30 REMARK 465 ALA B 31 REMARK 465 SER B 32 REMARK 465 ALA B 33 REMARK 465 ALA B 34 REMARK 465 GLY B 35 REMARK 465 HIS B 36 REMARK 465 HIS B 37 REMARK 465 GLU B 38 REMARK 465 PRO B 39 REMARK 465 ARG B 60 REMARK 465 GLY B 61 REMARK 465 ALA B 62 REMARK 465 ALA B 63 REMARK 465 HIS B 64 REMARK 465 HIS B 65 REMARK 465 ALA B 125 REMARK 465 ASN B 126 REMARK 465 LEU B 127 REMARK 465 GLU B 128 REMARK 465 HIS B 129 REMARK 465 HIS B 130 REMARK 465 HIS B 131 REMARK 465 HIS B 132 REMARK 465 HIS B 133 REMARK 465 HIS B 134
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 157 NH2 ARG A 229 1.56 REMARK 500 ND1 HIS B 68 CU CU1 B 303 1.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 16 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 17 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 TYR A 31 CB - CG - CD2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 178 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 TYR A 218 CB - CG - CD1 ANGL. DEV. = -5.9 DEGREES REMARK 500 TYR A 218 CG - CD1 - CE1 ANGL. DEV. = -4.9 DEGREES REMARK 500 ARG A 258 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG B 105 CD - NE - CZ ANGL. DEV. = 15.7 DEGREES REMARK 500 ARG B 105 NE - CZ - NH1 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG B 105 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 PRO B 124 CA - N - CD ANGL. DEV. = -9.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 52 -52.13 -130.73 REMARK 500 PHE A 103 -97.28 -135.01 REMARK 500 VAL A 133 -56.21 -120.61 REMARK 500 ASN A 171 -157.77 -147.69 REMARK 500 ASN A 188 101.88 77.82 REMARK 500 LEU A 189 -75.24 -95.77 REMARK 500 ASP A 243 -6.15 74.14 REMARK 500 ASN A 255 -11.67 60.70 REMARK 500 GLU B 67 -133.53 -130.14 REMARK 500 HIS B 68 -149.12 -123.26 REMARK 500 SER B 96 59.42 -148.07 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 607 DISTANCE = 7.37 ANGSTROMS REMARK 525 HOH B 631 DISTANCE = 7.70 ANGSTROMS REMARK 525 HOH A 621 DISTANCE = 7.20 ANGSTROMS REMARK 525 HOH A 675 DISTANCE = 5.25 ANGSTROMS REMARK 525 HOH A 676 DISTANCE = 8.32 ANGSTROMS REMARK 525 HOH A 680 DISTANCE = 7.25 ANGSTROMS REMARK 525 HOH A 682 DISTANCE = 5.02 ANGSTROMS REMARK 525 HOH A 688 DISTANCE = 5.11 ANGSTROMS REMARK 525 HOH A 694 DISTANCE = 7.69 ANGSTROMS REMARK 525 HOH A 703 DISTANCE = 5.66 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 301 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 38 NE2 REMARK 620 2 HIS A 54 NE2 101.0 REMARK 620 3 HIS A 63 NE2 128.8 105.5 REMARK 620 4 HOH B 340 O 98.6 110.6 111.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 302 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 190 NE2 REMARK 620 2 HIS A 194 NE2 97.9 REMARK 620 3 HIS A 216 NE2 100.2 131.6 REMARK 620 4 HOH B 340 O 117.3 106.8 103.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 B 303 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 67 OE1 REMARK 620 2 HIS B 82 NE2 139.2 REMARK 620 3 HIS B 82 NE2 118.1 22.0 REMARK 620 4 MET B 84 SD 173.8 37.1 58.8 REMARK 620 5 HIS B 97 NE2 147.8 9.6 31.6 28.0 REMARK 620 N 1 2 3 4
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 301 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 302 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 305 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 307 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 308 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 309 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 B 303 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 304 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 306
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WX3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MET1-FORM OF THE COPPER-BOUND REMARK 900 TYROSINASE IN COMPLEX WITH A CADDIE PROTEIN FROM REMARK 900 STREPTOMYCES CASTANEOGLOBISPORUS OBTAINED BY SOAKING IN REMARK 900 CUPRIC SULFATE SOLUTION FOR 36 HOURS REMARK 900 RELATED ID: 2ZMX RELATED DB: PDB REMARK 900 RELATED ID: 2ZMY RELATED DB: PDB REMARK 900 RELATED ID: 2ZN0 RELATED DB: PDB REMARK 900 RELATED ID: 2ZN1 RELATED DB: PDB REMARK 900 RELATED ID: 2ZN2 RELATED DB: PDB REMARK 900 RELATED ID: 2ZN3 RELATED DB: PDB REMARK 900 RELATED ID: 2ZN4 RELATED DB: PDB REMARK 900 RELATED ID: 2ZN5 RELATED DB: PDB REMARK 900 RELATED ID: 2ZN6 RELATED DB: PDB
REMARK 999 REMARK 999 SEQUENCE REMARK 999 FOR THE CHAIN A, THERE IS DIFFERENCE BETWEEN THE SEQRES AND THE REMARK 999 SEQUENCE DATABASE. THE DEPOSITOR STATES THAT SER A 123 IS REMARK 999 CORRECT AND SWISSPROT IS INCORRECT AT THIS POSITION. FOR THE REMARK 999 CHAIN B, SEQUENCE DATABASE REFERENCE OF THE CADDIE PROTEIN DOES REMARK 999 NOT CURRENTLY EXIST. THE LAST 8 RESIDUES ARE EXPRESSION TAGS.
DBREF 2ZMZ A 1 273 UNP Q83WS2 Q83WS2_9ACTO 1 273 DBREF 2ZMZ B 1 134 PDB 2ZMZ 2ZMZ 1 134
SEQADV 2ZMZ SER A 123 UNP Q83WS2 PHE 123 SEE REMARK 999 SEQADV 2ZMZ LEU A 274 UNP Q83WS2 EXPRESSION TAG SEQADV 2ZMZ GLU A 275 UNP Q83WS2 EXPRESSION TAG SEQADV 2ZMZ HIS A 276 UNP Q83WS2 EXPRESSION TAG SEQADV 2ZMZ HIS A 277 UNP Q83WS2 EXPRESSION TAG SEQADV 2ZMZ HIS A 278 UNP Q83WS2 EXPRESSION TAG SEQADV 2ZMZ HIS A 279 UNP Q83WS2 EXPRESSION TAG SEQADV 2ZMZ HIS A 280 UNP Q83WS2 EXPRESSION TAG SEQADV 2ZMZ HIS A 281 UNP Q83WS2 EXPRESSION TAG
SEQRES 1 A 281 MET THR VAL ARG LYS ASN GLN ALA THR LEU THR ALA ASP SEQRES 2 A 281 GLU LYS ARG ARG PHE VAL ALA ALA VAL LEU GLU LEU LYS SEQRES 3 A 281 ARG SER GLY ARG TYR ASP GLU PHE VAL ARG THR HIS ASN SEQRES 4 A 281 GLU PHE ILE MET SER ASP THR ASP SER GLY GLU ARG THR SEQRES 5 A 281 GLY HIS ARG SER PRO SER PHE LEU PRO TRP HIS ARG ARG SEQRES 6 A 281 PHE LEU LEU ASP PHE GLU GLN ALA LEU GLN SER VAL ASP SEQRES 7 A 281 SER SER VAL THR LEU PRO TYR TRP ASP TRP SER ALA ASP SEQRES 8 A 281 ARG THR VAL ARG ALA SER LEU TRP ALA PRO ASP PHE LEU SEQRES 9 A 281 GLY GLY THR GLY ARG SER THR ASP GLY ARG VAL MET ASP SEQRES 10 A 281 GLY PRO PHE ALA ALA SER THR GLY ASN TRP PRO ILE ASN SEQRES 11 A 281 VAL ARG VAL ASP SER ARG THR TYR LEU ARG ARG SER LEU SEQRES 12 A 281 GLY GLY SER VAL ALA GLU LEU PRO THR ARG ALA GLU VAL SEQRES 13 A 281 GLU SER VAL LEU ALA ILE SER ALA TYR ASP LEU PRO PRO SEQRES 14 A 281 TYR ASN SER ALA SER GLU GLY PHE ARG ASN HIS LEU GLU SEQRES 15 A 281 GLY TRP ARG GLY VAL ASN LEU HIS ASN ARG VAL HIS VAL SEQRES 16 A 281 TRP VAL GLY GLY GLN MET ALA THR GLY VAL SER PRO ASN SEQRES 17 A 281 ASP PRO VAL PHE TRP LEU HIS HIS ALA TYR VAL ASP LYS SEQRES 18 A 281 LEU TRP ALA GLU TRP GLN ARG ARG HIS PRO ASP SER ALA SEQRES 19 A 281 TYR VAL PRO THR GLY GLY THR PRO ASP VAL VAL ASP LEU SEQRES 20 A 281 ASN GLU THR MET LYS PRO TRP ASN THR VAL ARG PRO ALA SEQRES 21 A 281 ASP LEU LEU ASP HIS THR ALA TYR TYR THR PHE ASP ALA SEQRES 22 A 281 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 134 MET PRO GLU ILE THR ARG ARG ARG ALA LEU THR ALA ALA SEQRES 2 B 134 ALA ALA VAL ALA ALA THR ALA SER ALA ALA VAL THR LEU SEQRES 3 B 134 ALA ALA PRO ALA ALA SER ALA ALA GLY HIS HIS GLU PRO SEQRES 4 B 134 ALA ALA PRO GLU SER PHE ASP GLU VAL TYR LYS GLY ARG SEQRES 5 B 134 ARG ILE GLN GLY ARG PRO ALA ARG GLY ALA ALA HIS HIS SEQRES 6 B 134 HIS GLU HIS GLY GLY GLY TYR GLU VAL PHE VAL ASP GLY SEQRES 7 B 134 VAL GLN LEU HIS VAL MET ARG ASN ALA ASP GLY SER TRP SEQRES 8 B 134 ILE SER VAL VAL SER HIS TYR ASP PRO VAL PRO THR PRO SEQRES 9 B 134 ARG ALA ALA ALA ARG ALA ALA VAL ASP GLU LEU GLN GLY SEQRES 10 B 134 ALA PRO LEU LEU PRO PHE PRO ALA ASN LEU GLU HIS HIS SEQRES 11 B 134 HIS HIS HIS HIS
HET CU1 A 301 1 HET CU1 A 302 1 HET NO3 A 305 4 HET NO3 A 307 4 HET NO3 A 308 4 HET NO3 A 309 4 HET CU1 B 303 2 HET NO3 B 304 4 HET NO3 B 306 4
HETNAM CU1 COPPER (I) ION HETNAM NO3 NITRATE ION
FORMUL 3 CU1 3(CU 1+) FORMUL 5 NO3 6(N O3 1-) FORMUL 12 HOH *395(H2 O)
HELIX 1 1 ASN A 6 LEU A 10 5 5 HELIX 2 2 THR A 11 SER A 28 1 18 HELIX 3 3 GLY A 29 ASP A 45 1 17 HELIX 4 4 SER A 58 ASP A 78 1 21 HELIX 5 5 ALA A 96 ALA A 100 5 5 HELIX 6 6 ALA A 121 GLY A 125 5 5 HELIX 7 7 THR A 152 ALA A 161 1 10 HELIX 8 8 GLY A 176 GLY A 183 1 8 HELIX 9 9 LEU A 189 GLY A 198 1 10 HELIX 10 10 GLY A 199 THR A 203 5 5 HELIX 11 11 VAL A 205 ASP A 209 5 5 HELIX 12 12 PRO A 210 HIS A 230 1 21 HELIX 13 13 ARG A 258 LEU A 262 5 5 HELIX 14 14 ASP A 264 TYR A 268 5 5 HELIX 15 15 THR B 103 GLN B 116 1 14
SHEET 1 A 2 VAL A 3 ARG A 4 0 SHEET 2 A 2 THR A 270 PHE A 271 1 O THR A 270 N ARG A 4 SHEET 1 B 4 PHE B 45 TYR B 49 0 SHEET 2 B 4 ARG B 52 PRO B 58 -1 O ARG B 52 N TYR B 49 SHEET 3 B 4 TYR B 72 VAL B 76 -1 O GLU B 73 N ARG B 57 SHEET 4 B 4 VAL B 79 LEU B 81 -1 O LEU B 81 N VAL B 74 SHEET 1 C 3 VAL B 83 ARG B 85 0 SHEET 2 C 3 TRP B 91 SER B 93 -1 O ILE B 92 N MET B 84 SHEET 3 C 3 SER B 96 VAL B 101 -1 O VAL B 101 N TRP B 91
LINK NE2 HIS A 38 CU CU1 A 301 1555 1555 1.86 LINK NE2 HIS A 54 CU CU1 A 301 1555 1555 2.12 LINK NE2 HIS A 63 CU CU1 A 301 1555 1555 2.16 LINK NE2 HIS A 190 CU CU1 A 302 1555 1555 2.01 LINK NE2 HIS A 194 CU CU1 A 302 1555 1555 1.98 LINK NE2 HIS A 216 CU CU1 A 302 1555 1555 2.01 LINK OE1 GLU B 67 CU BCU1 B 303 1555 1555 2.30 LINK NE2AHIS B 82 CU ACU1 B 303 1555 1555 2.04 LINK NE2BHIS B 82 CU BCU1 B 303 1555 1555 1.96 LINK SD MET B 84 CU ACU1 B 303 1555 1555 2.36 LINK NE2AHIS B 97 CU ACU1 B 303 1555 1555 2.30 LINK CU CU1 A 301 O HOH B 340 1555 1555 2.35 LINK CU CU1 A 302 O HOH B 340 1555 1555 2.03
CISPEP 1 PRO A 168 PRO A 169 0 7.06 CISPEP 2 VAL A 236 PRO A 237 0 6.84 CISPEP 3 LYS A 252 PRO A 253 0 -0.36
SITE 1 AC1 4 HIS A 38 HIS A 54 HIS A 63 HOH B 340 SITE 1 AC2 4 HIS A 190 HIS A 194 HIS A 216 HOH B 340 SITE 1 AC3 8 TYR A 165 TRP A 223 TRP A 226 GLN A 227 SITE 2 AC3 8 ALA A 234 TYR A 235 LEU A 263 HOH A 663 SITE 1 AC4 8 THR A 238 GLY A 239 ASP A 246 LEU A 247 SITE 2 AC4 8 ASN A 248 HOH A 510 LYS B 50 HOH B 397 SITE 1 AC5 7 ARG A 228 HIS A 265 THR A 266 THR A 270 SITE 2 AC5 7 PHE A 271 LEU A 274 HOH A 541 SITE 1 AC6 3 THR A 107 GLY A 108 LEU A 143 SITE 1 AC7 7 ILE A 42 GLU B 67 HIS B 68 HIS B 82 SITE 2 AC7 7 MET B 84 HIS B 97 NO3 B 304 SITE 1 AC8 8 HIS B 82 VAL B 83 MET B 84 ILE B 92 SITE 2 AC8 8 SER B 93 VAL B 94 HIS B 97 CU1 B 303 SITE 1 AC9 8 GLY A 125 PRO A 128 HOH A 451 THR B 103 SITE 2 AC9 8 ARG B 105 ALA B 106 ARG B 109 HOH B 449
CRYST1 65.180 98.030 55.200 90.00 90.00 90.00 P 21 21 2 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.015342 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010201 0.000000 0.00000
SCALE3 0.000000 0.000000 0.018116 0.00000