10 20 30 40 50 60 70 80 2YWW - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER METAL BINDING PROTEIN 23-APR-07 2YWW
TITLE CRYSTAL STRUCTURE OF ASPARTATE CARBAMOYLTRANSFERASE TITLE 2 REGULATORY CHAIN FROM METHANOCALDOCOCCUS JANNASCHII
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; SOURCE 3 ORGANISM_TAXID: 2190; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET-21A
KEYWDS ATP COMPLEX, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT KEYWDS 2 ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, METAL KEYWDS 4 BINDING PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR M.KANAGAWA,S.BABA,S.KURAMITSU,S.YOKOYAMA,G.KAWAI,G.SAMPEI, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2YWW 1 VERSN REVDAT 1 23-OCT-07 2YWW 0
JRNL AUTH M.KANAGAWA,S.BABA,S.KURAMITSU,S.YOKOYAMA,G.KAWAI, JRNL AUTH 2 G.SAMPEI JRNL TITL CRYSTAL STRUCTURE OF ASPARTATE JRNL TITL 2 CARBAMOYLTRANSFERASE REGULATORY CHAIN FROM JRNL TITL 3 METHANOCALDOCOCCUS JANNASCHII JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 136155.690 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 23253 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2292 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3398 REMARK 3 BIN R VALUE (WORKING SET) : 0.2670 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 8.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 328 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.016 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2240 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 128 REMARK 3 SOLVENT ATOMS : 166 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.55000 REMARK 3 B22 (A**2) : -2.11000 REMARK 3 B33 (A**2) : -4.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM SIGMAA (A) : 0.19 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.23 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 3.10 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.91 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.350 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.130 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.180 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.380 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 47.87 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ATP_XPLOR.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ATP_XPLOR.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2YWW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JUL-07. REMARK 100 THE RCSB ID CODE IS RCSB027236.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.282150, 1.20000, 1.00000 REMARK 200 MONOCHROMATOR : FIXED EXIT SI DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU JUPITER 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23638 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.21100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.16M AMMMOUNIUM ACETATE, 0.08M BIS REMARK 280 -TRIS(PH5.5), 20%W/V PEG3350, 10MM ATP, 10MM ZINC CHLORIDE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.50150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.48750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.69900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.48750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.50150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.69900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ILE A 2 REMARK 465 PRO A 3 REMARK 465 MET A 4 REMARK 465 GLU A 5 REMARK 465 GLU A 6 REMARK 465 LEU A 7 REMARK 465 GLU A 149 REMARK 465 MET B 1 REMARK 465 ILE B 2 REMARK 465 PRO B 3 REMARK 465 MET B 4 REMARK 465 GLU B 5 REMARK 465 GLU B 6 REMARK 465 LEU B 7
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 591 O HOH B 594 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 105 -63.63 66.56 REMARK 500 GLU A 145 145.62 -175.92 REMARK 500 THR B 105 -59.24 67.34 REMARK 500 LYS B 119 58.70 -94.31 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 579 DISTANCE = 5.25 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 504 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 108 SG REMARK 620 2 CYS A 113 SG 113.8 REMARK 620 3 CYS A 136 SG 116.5 108.0 REMARK 620 4 CYS A 139 SG 98.7 111.2 108.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 108 SG REMARK 620 2 CYS B 113 SG 114.1 REMARK 620 3 CYS B 136 SG 111.3 108.1 REMARK 620 4 CYS B 139 SG 102.7 113.3 107.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 402 O2B REMARK 620 2 ATP A 403 O1G 158.5 REMARK 620 3 ATP A 402 O3G 93.9 99.1 REMARK 620 4 ATP A 403 O1B 84.8 82.2 178.7 REMARK 620 5 HOH A 546 O 71.4 91.5 89.7 90.2 REMARK 620 6 HOH A 572 O 96.3 100.2 92.2 87.6 167.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP B 400 O1G REMARK 620 2 ATP B 400 O1B 81.8 REMARK 620 3 ATP B 401 O3G 102.6 170.6 REMARK 620 4 HOH B 565 O 84.4 101.5 87.3 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 501 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 502 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 503 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 504 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 400 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 401 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 402 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 403
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MJA001001406.1 RELATED DB: TARGETDB
DBREF 2YWW A 1 149 UNP Q58801 PYRI_METJA 1 149 DBREF 2YWW B 1 149 UNP Q58801 PYRI_METJA 1 149
SEQRES 1 A 149 MET ILE PRO MET GLU GLU LEU LYS VAL LYS LYS ILE THR SEQRES 2 A 149 ASN GLY THR VAL ILE ASP HIS ILE ASP ALA GLY LYS ALA SEQRES 3 A 149 LEU MET VAL PHE LYS VAL LEU ASN VAL PRO LYS GLU THR SEQRES 4 A 149 SER VAL MET ILE ALA ILE ASN VAL PRO SER LYS LYS LYS SEQRES 5 A 149 GLY LYS LYS ASP ILE LEU LYS ILE GLU GLY ILE GLU LEU SEQRES 6 A 149 LYS LYS GLU ASP VAL ASP LYS ILE SER LEU ILE SER PRO SEQRES 7 A 149 ASP VAL THR ILE ASN ILE ILE ARG ASN GLY LYS VAL VAL SEQRES 8 A 149 GLU LYS LEU LYS PRO GLN ILE PRO ASP GLU ILE GLU GLY SEQRES 9 A 149 THR LEU LYS CYS THR ASN PRO ASN CYS ILE THR ASN LYS SEQRES 10 A 149 GLU LYS VAL ARG GLY LYS PHE LYS ILE GLU SER LYS ASN SEQRES 11 A 149 PRO LEU LYS ILE ARG CYS TYR TYR CYS GLU LYS PHE LEU SEQRES 12 A 149 ASN GLU VAL ILE PHE GLU SEQRES 1 B 149 MET ILE PRO MET GLU GLU LEU LYS VAL LYS LYS ILE THR SEQRES 2 B 149 ASN GLY THR VAL ILE ASP HIS ILE ASP ALA GLY LYS ALA SEQRES 3 B 149 LEU MET VAL PHE LYS VAL LEU ASN VAL PRO LYS GLU THR SEQRES 4 B 149 SER VAL MET ILE ALA ILE ASN VAL PRO SER LYS LYS LYS SEQRES 5 B 149 GLY LYS LYS ASP ILE LEU LYS ILE GLU GLY ILE GLU LEU SEQRES 6 B 149 LYS LYS GLU ASP VAL ASP LYS ILE SER LEU ILE SER PRO SEQRES 7 B 149 ASP VAL THR ILE ASN ILE ILE ARG ASN GLY LYS VAL VAL SEQRES 8 B 149 GLU LYS LEU LYS PRO GLN ILE PRO ASP GLU ILE GLU GLY SEQRES 9 B 149 THR LEU LYS CYS THR ASN PRO ASN CYS ILE THR ASN LYS SEQRES 10 B 149 GLU LYS VAL ARG GLY LYS PHE LYS ILE GLU SER LYS ASN SEQRES 11 B 149 PRO LEU LYS ILE ARG CYS TYR TYR CYS GLU LYS PHE LEU SEQRES 12 B 149 ASN GLU VAL ILE PHE GLU
HET ZN A 501 1 HET ZN B 502 1 HET ZN B 503 1 HET ZN A 504 1 HET ATP B 400 31 HET ATP B 401 31 HET ATP A 402 31 HET ATP A 403 31
HETNAM ZN ZINC ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE
FORMUL 3 ZN 4(ZN 2+) FORMUL 7 ATP 4(C10 H16 N5 O13 P3) FORMUL 11 HOH *166(H2 O)
HELIX 1 1 LYS A 25 ASN A 34 1 10 HELIX 2 2 LYS A 66 SER A 77 1 12 HELIX 3 3 CYS A 113 LYS A 117 5 5 HELIX 4 4 LYS B 25 ASN B 34 1 10 HELIX 5 5 LYS B 66 SER B 74 1 9 HELIX 6 6 CYS B 113 GLU B 118 1 6
SHEET 1 A10 VAL A 41 SER A 49 0 SHEET 2 A10 GLY A 53 GLU A 61 -1 O LYS A 59 N MET A 42 SHEET 3 A10 GLY A 15 ASP A 22 -1 N ILE A 18 O LEU A 58 SHEET 4 A10 THR A 81 ARG A 86 -1 O ILE A 85 N GLY A 15 SHEET 5 A10 LYS A 89 LYS A 95 -1 O LEU A 94 N ILE A 82 SHEET 6 A10 LYS B 89 LEU B 94 -1 O LYS B 93 N LYS A 95 SHEET 7 A10 THR B 81 ARG B 86 -1 N ILE B 82 O LEU B 94 SHEET 8 A10 ASN B 14 ASP B 22 -1 N GLY B 15 O ILE B 85 SHEET 9 A10 GLY B 53 GLU B 61 -1 O LEU B 58 N ILE B 18 SHEET 10 A10 VAL B 41 SER B 49 -1 N MET B 42 O LYS B 59 SHEET 1 B 3 GLU A 101 GLU A 103 0 SHEET 2 B 3 LYS A 123 SER A 128 -1 O PHE A 124 N ILE A 102 SHEET 3 B 3 LYS A 133 CYS A 136 -1 O LYS A 133 N SER A 128 SHEET 1 C 3 GLU B 101 GLU B 103 0 SHEET 2 C 3 LYS B 123 SER B 128 -1 O PHE B 124 N ILE B 102 SHEET 3 C 3 LYS B 133 CYS B 136 -1 O ARG B 135 N LYS B 125
LINK SG CYS A 108 ZN ZN A 504 1555 1555 2.44 LINK SG CYS A 113 ZN ZN A 504 1555 1555 2.46 LINK SG CYS A 136 ZN ZN A 504 1555 1555 2.34 LINK SG CYS A 139 ZN ZN A 504 1555 1555 2.41 LINK SG CYS B 108 ZN ZN B 503 1555 1555 2.32 LINK SG CYS B 113 ZN ZN B 503 1555 1555 2.39 LINK SG CYS B 136 ZN ZN B 503 1555 1555 2.41 LINK SG CYS B 139 ZN ZN B 503 1555 1555 2.37 LINK ZN ZN A 501 O2B ATP A 402 1555 1555 2.39 LINK ZN ZN A 501 O1G ATP A 403 1555 1555 2.06 LINK ZN ZN A 501 O3G ATP A 402 1555 1555 1.94 LINK ZN ZN A 501 O1B ATP A 403 1555 1555 2.16 LINK ZN ZN B 502 O1G ATP B 400 1555 1555 2.05 LINK ZN ZN B 502 O1B ATP B 400 1555 1555 2.11 LINK ZN ZN B 502 O3G ATP B 401 1555 1555 2.00 LINK ZN ZN A 501 O HOH A 546 1555 1555 2.31 LINK ZN ZN A 501 O HOH A 572 1555 1555 2.33 LINK ZN ZN B 502 O HOH B 565 1555 1555 2.23
CISPEP 1 ASN A 130 PRO A 131 0 -0.18 CISPEP 2 ASN B 130 PRO B 131 0 0.18
SITE 1 AC1 5 LYS A 51 ATP A 402 ATP A 403 HOH A 546 SITE 2 AC1 5 HOH A 572 SITE 1 AC2 3 ATP B 400 ATP B 401 HOH B 565 SITE 1 AC3 4 CYS B 108 CYS B 113 CYS B 136 CYS B 139 SITE 1 AC4 4 CYS A 108 CYS A 113 CYS A 136 CYS A 139 SITE 1 AC5 18 LYS B 11 ILE B 12 VAL B 17 ASP B 19 SITE 2 AC5 18 HIS B 20 LYS B 51 LYS B 59 ILE B 85 SITE 3 AC5 18 GLY B 88 VAL B 90 LYS B 93 ATP B 401 SITE 4 AC5 18 ZN B 502 HOH B 506 HOH B 528 HOH B 548 SITE 5 AC5 18 HOH B 565 HOH B 592 SITE 1 AC6 19 VAL A 9 LYS A 10 MET A 42 ATP A 402 SITE 2 AC6 19 HIS B 20 MET B 42 VAL B 47 PRO B 48 SITE 3 AC6 19 SER B 49 LYS B 50 LYS B 51 LYS B 55 SITE 4 AC6 19 LYS B 59 ATP B 400 ZN B 502 HOH B 504 SITE 5 AC6 19 HOH B 547 HOH B 552 HOH B 565 SITE 1 AC7 21 HIS A 20 MET A 42 VAL A 47 PRO A 48 SITE 2 AC7 21 SER A 49 LYS A 50 LYS A 51 LYS A 55 SITE 3 AC7 21 ILE A 57 LYS A 59 ATP A 403 ZN A 501 SITE 4 AC7 21 HOH A 509 HOH A 517 HOH A 522 HOH A 534 SITE 5 AC7 21 HOH A 546 HOH A 572 VAL B 9 LYS B 10 SITE 6 AC7 21 ATP B 401 SITE 1 AC8 18 LYS A 11 ILE A 12 VAL A 17 ASP A 19 SITE 2 AC8 18 HIS A 20 LYS A 51 LYS A 59 GLY A 88 SITE 3 AC8 18 VAL A 90 LYS A 93 ATP A 402 ZN A 501 SITE 4 AC8 18 HOH A 505 HOH A 509 HOH A 517 HOH A 540 SITE 5 AC8 18 LYS B 129 HOH B 518
CRYST1 51.003 71.398 92.975 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.019607 0.000000 0.000000 0.00000
SCALE2 0.000000 0.014006 0.000000 0.00000
SCALE3 0.000000 0.000000 0.010756 0.00000