10 20 30 40 50 60 70 80 2YSG - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PROTEIN BINDING 03-APR-07 2YSG
TITLE SOLUTION STRUCTURE OF THE WW DOMAIN FROM THE HUMAN SYNTAXIN- TITLE 2 BINDING PROTEIN 4
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SYNTAXIN-BINDING PROTEIN 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: WW DOMAIN, UNP RESIDUES 498-530; COMPND 5 SYNONYM: SYNTAXIN 4-INTERACTING PROTEIN, STX4-INTERACTING COMPND 6 PROTEIN, SYNIP; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: STXBP4; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P070213-03; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS SYNIP, STXBP4, WW DOMAIN, NMR, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 4 RSGI, PROTEIN BINDING
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR S.OHNISHI,N.TOCHIO,M.SATO,S.KOSHIBA,T.HARADA,S.WATANABE, AUTHOR 2 T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2YSG 1 VERSN REVDAT 1 09-OCT-07 2YSG 0
JRNL AUTH S.OHNISHI,N.TOCHIO,M.SATO,S.KOSHIBA,T.HARADA, JRNL AUTH 2 S.WATANABE,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE WW DOMAIN FROM THE HUMAN JRNL TITL 2 SYNTAXIN-BINDING PROTEIN 4 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2YSG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB027076.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.9MM SAMPLE U-15N,13C; 20MM REMARK 210 D-TRIS-HCL; 100MM NACL; 1MM D- REMARK 210 DTT; 0.02% NAN3; 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 37 80.05 -69.83 REMARK 500 2 ALA A 18 -19.75 -49.26 REMARK 500 2 ILE A 21 155.73 -45.81 REMARK 500 2 GLN A 30 46.71 35.10 REMARK 500 2 PRO A 37 2.92 -69.77 REMARK 500 3 SER A 6 43.21 -91.35 REMARK 500 3 TYR A 10 132.17 -38.32 REMARK 500 3 GLN A 30 43.98 34.38 REMARK 500 3 PRO A 37 3.12 -69.77 REMARK 500 3 VAL A 38 78.72 -106.27 REMARK 500 4 LEU A 8 154.78 -46.39 REMARK 500 4 ILE A 21 153.28 -43.56 REMARK 500 4 GLN A 30 47.00 34.75 REMARK 500 4 PRO A 37 2.99 -69.78 REMARK 500 5 SER A 5 42.50 -82.31 REMARK 500 5 TYR A 10 141.60 -34.94 REMARK 500 5 GLN A 30 49.32 35.88 REMARK 500 6 GLN A 30 45.47 34.38 REMARK 500 7 SER A 3 -62.29 -107.36 REMARK 500 7 SER A 5 96.08 -57.38 REMARK 500 7 GLN A 30 48.90 34.54 REMARK 500 7 PRO A 37 3.03 -69.77 REMARK 500 8 LEU A 8 156.54 -49.50 REMARK 500 8 ILE A 21 154.57 -44.69 REMARK 500 8 GLN A 30 44.14 35.79 REMARK 500 9 TYR A 10 147.28 -34.61 REMARK 500 9 GLN A 30 46.40 37.30 REMARK 500 10 SER A 2 41.94 -81.75 REMARK 500 10 SER A 3 96.37 -67.98 REMARK 500 10 GLN A 30 52.38 35.06 REMARK 500 10 PRO A 37 2.75 -69.73 REMARK 500 11 SER A 3 117.47 -167.85 REMARK 500 11 ILE A 21 153.82 -48.29 REMARK 500 11 GLN A 30 46.00 36.08 REMARK 500 11 PRO A 37 1.44 -69.75 REMARK 500 11 MET A 39 -52.25 -127.56 REMARK 500 12 GLN A 30 49.63 35.64 REMARK 500 12 PRO A 37 2.98 -69.80 REMARK 500 13 TYR A 10 138.69 -34.52 REMARK 500 13 GLN A 30 42.63 37.93 REMARK 500 13 PRO A 37 2.77 -69.71 REMARK 500 14 SER A 5 106.59 -41.76 REMARK 500 14 LEU A 8 156.28 -43.82 REMARK 500 14 ILE A 21 158.86 -49.53 REMARK 500 14 GLN A 30 41.34 34.46 REMARK 500 14 PRO A 37 2.87 -69.77 REMARK 500 15 PRO A 37 3.13 -69.75 REMARK 500 16 TYR A 10 121.17 -39.24 REMARK 500 16 ILE A 21 155.47 -48.60 REMARK 500 16 GLN A 30 46.77 37.10 REMARK 500 17 TYR A 10 135.09 -35.91 REMARK 500 17 GLN A 30 47.52 37.48 REMARK 500 17 PRO A 37 2.88 -69.77 REMARK 500 18 SER A 5 154.85 -48.69 REMARK 500 18 TYR A 10 131.94 -35.45 REMARK 500 18 GLN A 30 49.39 34.38 REMARK 500 19 GLN A 30 45.74 34.95 REMARK 500 19 PRO A 37 2.93 -69.67 REMARK 500 20 TYR A 10 129.60 -37.59 REMARK 500 20 GLN A 30 48.72 34.36 REMARK 500 20 PRO A 37 3.08 -69.78 REMARK 500 20 MET A 39 79.51 -119.80 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSB001016496.1 RELATED DB: TARGETDB
DBREF 2YSG A 8 40 UNP Q6ZWJ1 STXB4_HUMAN 498 530
SEQADV 2YSG GLY A 1 UNP Q6ZWJ1 EXPRESSION TAG SEQADV 2YSG SER A 2 UNP Q6ZWJ1 EXPRESSION TAG SEQADV 2YSG SER A 3 UNP Q6ZWJ1 EXPRESSION TAG SEQADV 2YSG GLY A 4 UNP Q6ZWJ1 EXPRESSION TAG SEQADV 2YSG SER A 5 UNP Q6ZWJ1 EXPRESSION TAG SEQADV 2YSG SER A 6 UNP Q6ZWJ1 EXPRESSION TAG SEQADV 2YSG GLY A 7 UNP Q6ZWJ1 EXPRESSION TAG
SEQRES 1 A 40 GLY SER SER GLY SER SER GLY LEU PRO TYR GLY TRP GLU SEQRES 2 A 40 GLU ALA TYR THR ALA ASP GLY ILE LYS TYR PHE ILE ASN SEQRES 3 A 40 HIS VAL THR GLN THR THR SER TRP ILE HIS PRO VAL MET SEQRES 4 A 40 SER
SHEET 1 A 3 TRP A 12 TYR A 16 0 SHEET 2 A 3 LYS A 22 ASN A 26 -1 O ILE A 25 N GLU A 13 SHEET 3 A 3 THR A 32 SER A 33 -1 O SER A 33 N PHE A 24
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000