10 20 30 40 50 60 70 80 2YSB - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PROTEIN BINDING 03-APR-07 2YSB
TITLE SOLUTION STRUCTURE OF THE FIRST WW DOMAIN FROM THE MOUSE TITLE 2 SALVADOR HOMOLOG 1 PROTEIN (SAV1)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SALVADOR HOMOLOG 1 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: WW DOMAIN; COMPND 5 SYNONYM: 45 KDA WW DOMAIN PROTEIN, MWW45; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: SAV1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P061010-04; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS SALVADOR, WW DOMAIN, NMR, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 4 RSGI, PROTEIN BINDING
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR S.OHNISHI,M.SATO,S.KOSHIBA,T.HARADA,S.WATANABE,T.KIGAWA, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI)
REVDAT 2 24-FEB-09 2YSB 1 VERSN REVDAT 1 09-OCT-07 2YSB 0
JRNL AUTH S.OHNISHI,M.SATO,S.KOSHIBA,T.HARADA,S.WATANABE, JRNL AUTH 2 T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE FIRST WW DOMAIN FROM THE JRNL TITL 2 MOUSE SALVADOR HOMOLOG 1 PROTEIN (SAV1) JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2YSB COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB027071.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0MM SAMPLE U-15N,13C; 20MM REMARK 210 D-TRIS-HCL; 100MM NACL; 1MM D- REMARK 210 DTT; 0.02% NAN3; 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 9 38.46 36.83 REMARK 500 1 LEU A 10 157.24 -49.36 REMARK 500 1 PRO A 11 83.72 -69.82 REMARK 500 2 SER A 5 101.26 -36.76 REMARK 500 2 ASP A 9 46.06 -99.25 REMARK 500 2 LEU A 10 157.31 -42.92 REMARK 500 2 PRO A 11 85.76 -69.82 REMARK 500 2 ASN A 34 47.90 74.40 REMARK 500 2 PRO A 46 98.48 -69.68 REMARK 500 3 ASP A 9 48.80 -76.12 REMARK 500 3 LEU A 10 157.12 -42.63 REMARK 500 3 PRO A 11 87.28 -69.76 REMARK 500 3 ASN A 34 45.05 74.78 REMARK 500 3 GLU A 43 93.93 -64.40 REMARK 500 4 SER A 6 117.68 -38.13 REMARK 500 4 ASP A 9 34.80 39.02 REMARK 500 4 LEU A 10 156.24 -44.51 REMARK 500 4 PRO A 11 81.82 -69.80 REMARK 500 4 ASN A 34 47.18 72.49 REMARK 500 4 PRO A 46 1.98 -69.83 REMARK 500 5 ASP A 9 39.71 36.83 REMARK 500 5 PRO A 11 82.37 -69.78 REMARK 500 5 ASN A 34 46.42 70.90 REMARK 500 6 ASP A 9 38.05 37.20 REMARK 500 6 PRO A 11 82.51 -69.73 REMARK 500 6 ASN A 34 47.96 73.18 REMARK 500 6 GLU A 43 100.45 -56.44 REMARK 500 6 SER A 44 119.64 -174.74 REMARK 500 7 ASP A 9 32.25 39.60 REMARK 500 7 LEU A 10 157.01 -39.00 REMARK 500 7 PRO A 11 83.45 -69.73 REMARK 500 7 PRO A 46 0.79 -69.74 REMARK 500 8 SER A 5 108.02 -48.11 REMARK 500 8 ASP A 9 46.78 -77.88 REMARK 500 8 LEU A 10 157.31 -42.75 REMARK 500 8 PRO A 11 87.00 -69.75 REMARK 500 8 ASN A 34 43.60 73.85 REMARK 500 8 GLU A 43 99.75 -58.52 REMARK 500 8 SER A 48 42.20 -88.62 REMARK 500 9 ASP A 9 36.74 37.99 REMARK 500 9 LEU A 10 157.11 -49.59 REMARK 500 9 PRO A 11 84.51 -69.69 REMARK 500 9 ASN A 34 49.36 70.08 REMARK 500 10 ASP A 9 48.28 -76.25 REMARK 500 10 LEU A 10 157.40 -41.35 REMARK 500 10 PRO A 11 85.84 -69.77 REMARK 500 10 ASN A 34 47.23 74.07 REMARK 500 10 PRO A 46 -177.33 -69.73 REMARK 500 10 SER A 48 42.25 -109.70 REMARK 500 11 SER A 3 106.91 -37.50 REMARK 500 11 ASP A 9 36.32 -83.91 REMARK 500 11 LEU A 10 157.37 -45.63 REMARK 500 11 PRO A 11 82.15 -69.77 REMARK 500 11 PRO A 46 2.73 -69.81 REMARK 500 12 SER A 2 42.22 36.01 REMARK 500 12 SER A 5 117.45 -163.83 REMARK 500 12 ASP A 9 43.24 34.44 REMARK 500 12 LEU A 10 153.58 -37.68 REMARK 500 12 PRO A 11 88.72 -69.76 REMARK 500 13 ASP A 9 45.91 -78.55 REMARK 500 13 LEU A 10 157.36 -47.61 REMARK 500 13 PRO A 11 85.31 -69.87 REMARK 500 13 GLU A 43 98.39 -63.33 REMARK 500 14 ASP A 9 42.74 34.43 REMARK 500 14 LEU A 10 155.46 -36.85 REMARK 500 14 PRO A 11 83.90 -69.69 REMARK 500 14 ASN A 34 43.54 70.01 REMARK 500 14 PRO A 46 2.27 -69.67 REMARK 500 15 ASP A 9 42.47 34.42 REMARK 500 15 LEU A 10 156.21 -37.46 REMARK 500 15 PRO A 11 80.52 -69.72 REMARK 500 15 ASN A 34 43.95 70.65 REMARK 500 15 PRO A 46 1.73 -69.72 REMARK 500 16 ASP A 9 37.10 -85.56 REMARK 500 16 LEU A 10 156.61 -42.50 REMARK 500 16 PRO A 11 85.58 -69.81 REMARK 500 16 ASN A 34 48.89 72.17 REMARK 500 17 ASP A 9 37.07 37.95 REMARK 500 17 LEU A 10 157.21 -46.10 REMARK 500 17 PRO A 11 82.74 -69.76 REMARK 500 18 LEU A 10 156.38 -45.66 REMARK 500 18 PRO A 11 84.96 -69.69 REMARK 500 18 PRO A 14 99.38 -69.77 REMARK 500 19 GLU A 8 27.81 39.87 REMARK 500 19 ASP A 9 40.82 36.29 REMARK 500 19 LEU A 10 157.12 -46.70 REMARK 500 19 PRO A 11 84.20 -69.71 REMARK 500 20 ASP A 9 33.38 39.33 REMARK 500 20 LEU A 10 154.45 -39.00 REMARK 500 20 PRO A 11 80.19 -69.63 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMI002016694.4 RELATED DB: TARGETDB
DBREF 2YSB A 8 43 UNP Q8VEB2 SAV1_MOUSE 198 233
SEQADV 2YSB GLY A 1 UNP Q8VEB2 EXPRESSION TAG SEQADV 2YSB SER A 2 UNP Q8VEB2 EXPRESSION TAG SEQADV 2YSB SER A 3 UNP Q8VEB2 EXPRESSION TAG SEQADV 2YSB GLY A 4 UNP Q8VEB2 EXPRESSION TAG SEQADV 2YSB SER A 5 UNP Q8VEB2 EXPRESSION TAG SEQADV 2YSB SER A 6 UNP Q8VEB2 EXPRESSION TAG SEQADV 2YSB GLY A 7 UNP Q8VEB2 EXPRESSION TAG SEQADV 2YSB SER A 44 UNP Q8VEB2 EXPRESSION TAG SEQADV 2YSB GLY A 45 UNP Q8VEB2 EXPRESSION TAG SEQADV 2YSB PRO A 46 UNP Q8VEB2 EXPRESSION TAG SEQADV 2YSB SER A 47 UNP Q8VEB2 EXPRESSION TAG SEQADV 2YSB SER A 48 UNP Q8VEB2 EXPRESSION TAG SEQADV 2YSB GLY A 49 UNP Q8VEB2 EXPRESSION TAG
SEQRES 1 A 49 GLY SER SER GLY SER SER GLY GLU ASP LEU PRO LEU PRO SEQRES 2 A 49 PRO GLY TRP SER VAL ASP TRP THR MET ARG GLY ARG LYS SEQRES 3 A 49 TYR TYR ILE ASP HIS ASN THR ASN THR THR HIS TRP SER SEQRES 4 A 49 HIS PRO LEU GLU SER GLY PRO SER SER GLY
SHEET 1 A 3 TRP A 16 TRP A 20 0 SHEET 2 A 3 LYS A 26 ASP A 30 -1 O ILE A 29 N SER A 17 SHEET 3 A 3 THR A 35 HIS A 37 -1 O THR A 35 N ASP A 30
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000