10 20 30 40 50 60 70 80 2YOR - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 26-OCT-12 2YOR
TITLE CRYSTALLIZATION OF A 45 KDA PEROXYGENASE- PEROXIDASE FROM TITLE 2 THE MUSHROOM AGROCYBE AEGERITA AND STRUCTURE DETERMINATION TITLE 3 BY SAD UTILIZING ONLY THE HAEM IRON
CAVEAT 2YOR NAG B 401 C1 IS PLANAR
COMPND MOL_ID: 1; COMPND 2 MOLECULE: AROMATIC PEROXYGENASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 47-371; COMPND 5 SYNONYM: AAPIIPH85, AAP; COMPND 6 EC: 1.11.2.1
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROCYBE AEGERITA; SOURCE 3 ORGANISM_COMMON: BLACK POPLAR MUSHROOM; SOURCE 4 ORGANISM_TAXID: 5400; SOURCE 5 STRAIN: TM-A1; SOURCE 6 OTHER_DETAILS: GERMAN COLLECTION OF MICROORGANISMS (DSM), ACCESS SOURCE 7 NUMBER DSMZ 22459
KEYWDS OXIDOREDUCTASE, PEROXIDASE/PEROXYGENASE, UNSPECIFIC/AROMATIC KEYWDS 2 PEROXYGENASE, HEME, GLYCOPROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR K.PIONTEK,E.STRITTMATTER,R.ULLRICH,D.A.PLATTNER,M.HOFRICHTER
REVDAT 3 01-APR-15 2YOR 1 JRNL REVDAT 2 11-DEC-13 2YOR 1 JRNL REVDAT 1 23-OCT-13 2YOR 0
JRNL AUTH K.PIONTEK,E.STRITTMATTER,R.ULLRICH,G.GROBE,M.J.PECYNA, JRNL AUTH 2 M.KLUGE,K.SCHEIBNER,M.HOFRICHTER,D.A.PLATTNER JRNL TITL STRUCTURAL BASIS OF SUBSTRATE CONVERSION IN A NEW AROMATIC JRNL TITL 2 PEROXYGENASE: P450 FUNCTIONALITY WITH BENEFITS JRNL REF J.BIOL.CHEM. V. 288 34767 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 24126915 JRNL DOI 10.1074/JBC.M113.514521
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.PIONTEK,R.ULLRICH,C.LIERS,K.DIEDERICHS,D.A.PLATTNER, REMARK 1 AUTH 2 M.HOFRICHTER REMARK 1 TITL CRYSTALLIZATION OF A 45 KDA PEROXYGENASE/PEROXIDASE FROM REMARK 1 TITL 2 THE MUSHROOM AGROCYBE AEGERITA AND STRUCTURE DETERMINATION REMARK 1 TITL 3 BY SAD UTILIZING ONLY THE HAEM IRON. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 66 693 2010 REMARK 1 REFN ISSN 1744-3091 REMARK 1 PMID 20516602 REMARK 1 DOI 10.1107/S1744309110013515
REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 100.00 REMARK 3 NUMBER OF REFLECTIONS : 45282 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.17235 REMARK 3 R VALUE (WORKING SET) : 0.16899 REMARK 3 FREE R VALUE : 0.23742 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 2384 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.194 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.251 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2896 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.404 REMARK 3 BIN FREE R VALUE SET COUNT : 153 REMARK 3 BIN FREE R VALUE : 0.450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5034 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 584 REMARK 3 SOLVENT ATOMS : 643 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.294 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.69 REMARK 3 B22 (A**2) : 0.32 REMARK 3 B33 (A**2) : -1.01 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.210 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.197 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.838 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5802 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7959 ; 1.617 ; 2.094 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 650 ; 7.323 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 262 ;33.608 ;23.817 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 754 ;15.619 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;18.751 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 903 ; 0.140 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4429 ; 0.020 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3245 ; 2.904 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5237 ; 4.239 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2557 ; 3.654 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2720 ; 5.219 ; 3.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES REFINED INDIVIDUALLY
REMARK 4 REMARK 4 2YOR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-DEC-12. REMARK 100 THE PDBE ID CODE IS EBI-54594.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9724 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD (QUANTUM 315R) REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47667 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.19 REMARK 200 RESOLUTION RANGE LOW (A) : 47.51 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 7.2 REMARK 200 R MERGE (I) : 0.07 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.90 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.77 REMARK 200 R MERGE FOR SHELL (I) : 0.40 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.00 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, SHELXE, AUTOSHARP, SOLOMON REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M AMMONIUM SULFATE, 100MM REMARK 280 TRIS-HCL PH 8.5
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.64500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.60000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.51500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.60000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.64500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.51500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -98.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 4 REMARK 465 ASP B 328
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 286 O5 NAG A 391 2.02 REMARK 500 O1 BMA A 501 O HOH A 2297 2.18 REMARK 500 O3 SO4 B 1357 O HOH B 2291 2.10 REMARK 500 O HOH A 2119 O HOH A 2261 2.10 REMARK 500 O HOH B 2023 O HOH B 2052 2.16 REMARK 500 O HOH B 2053 O HOH B 2054 2.19 REMARK 500 O HOH B 2074 O HOH B 2253 2.03 REMARK 500 O HOH B 2271 O HOH B 2272 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 100 NE - CZ - NH1 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 91 34.47 74.82 REMARK 500 VAL A 112 55.87 39.36 REMARK 500 THR A 120 -72.05 -84.79 REMARK 500 PHE A 185 55.29 -149.36 REMARK 500 ASP A 187 -124.53 53.54 REMARK 500 SER A 240 -89.63 -143.44 REMARK 500 CYS A 319 176.72 68.69 REMARK 500 ASN B 11 95.57 41.31 REMARK 500 ASP B 19 -169.83 -103.57 REMARK 500 PRO B 29 132.90 -16.78 REMARK 500 ASP B 91 39.97 71.50 REMARK 500 ASP B 187 -125.74 49.96 REMARK 500 SER B 240 -93.54 -142.79 REMARK 500 VAL B 259 71.42 -113.80 REMARK 500 ILE B 287 -61.34 -109.03 REMARK 500 THR B 297 174.25 -59.44 REMARK 500 CYS B 319 175.25 68.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO B 29 GLY B 30 -147.90 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 353 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 122 OE2 REMARK 620 2 GLY A 123 O 82.1 REMARK 620 3 SER A 126 OG 170.5 96.2 REMARK 620 4 HOH A2151 O 83.0 87.1 87.6 REMARK 620 5 HOH A2152 O 88.3 170.1 93.0 89.6 REMARK 620 6 HEM A 350 O1A 98.4 90.2 90.9 176.7 93.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 353 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 122 OE2 REMARK 620 2 GLY B 123 O 78.8 REMARK 620 3 HOH B2125 O 78.8 88.1 REMARK 620 4 SER B 126 OG 171.9 100.3 93.2 REMARK 620 5 HEM B 350 O1A 96.5 89.1 174.9 91.6 REMARK 620 6 HOH B2126 O 90.1 168.6 92.3 91.0 89.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 350 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HEM A 350 ND REMARK 620 2 CYS A 36 SG 90.6 REMARK 620 3 HEM A 350 NA 91.0 97.3 REMARK 620 4 HEM A 350 NB 176.1 93.2 87.5 REMARK 620 5 HEM A 350 NC 89.7 85.4 177.2 91.6 REMARK 620 6 MZ0 A 354 N3 96.0 172.6 85.9 80.3 91.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 350 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HEM B 350 NB REMARK 620 2 HEM B 350 NA 89.0 REMARK 620 3 HEM B 350 ND 176.6 89.8 REMARK 620 4 MZ0 B 354 N3 75.7 91.9 101.2 REMARK 620 5 CYS B 36 SG 93.3 94.8 90.0 167.0 REMARK 620 6 HEM B 350 NC 91.4 178.1 89.7 86.4 87.0 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 350 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 353 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MZ0 A 354 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BMA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1355 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1356 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1357 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1358 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 350 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 353 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MZ0 B 354 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BMA B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG B 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS B1355 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1356 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1357 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1358 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1359 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1360 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1361 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR MONO-SACCHARIDE REMARK 800 NAG A 411 BOUND TO ASN A 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR POLY-SACCHARIDE REMARK 800 RESIDUES NAG A 361 THROUGH BMA A 363 BOUND TO ASN A 141 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR POLY-SACCHARIDE REMARK 800 RESIDUES NAG A 371 THROUGH MAN A 375 BOUND TO ASN A 161 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR POLY-SACCHARIDE REMARK 800 RESIDUES NAG A 381 THROUGH BMA A 383 BOUND TO ASN A 182 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR MONO-SACCHARIDE REMARK 800 NAG A 391 BOUND TO ASN A 286 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR MONO-SACCHARIDE REMARK 800 NAG A 401 BOUND TO ASN A 295 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR MONO-SACCHARIDE REMARK 800 NAG B 411 BOUND TO ASN B 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR POLY-SACCHARIDE REMARK 800 RESIDUES NAG B 361 THROUGH MAN B 368 BOUND TO ASN B 141 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR POLY-SACCHARIDE REMARK 800 RESIDUES NAG B 371 THROUGH NAG B 372 BOUND TO ASN B 161 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR POLY-SACCHARIDE REMARK 800 RESIDUES NAG B 381 THROUGH NAG B 382 BOUND TO ASN B 182 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR POLY-SACCHARIDE REMARK 800 RESIDUES NAG B 391 THROUGH NAG B 392 BOUND TO ASN B 286 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR POLY-SACCHARIDE REMARK 800 RESIDUES NAG B 401 THROUGH NAG B 402 BOUND TO ASN B 295
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YP1 RELATED DB: PDB REMARK 900 CRYSTALLIZATION OF A 45 KDA PEROXYGENASE- PEROXIDASE REMARK 900 FROM THE MUSHROOM AGROCYBE AEGERITA AND STRUCTURE REMARK 900 DETERMINATION BY SAD UTILIZING ONLY THE HAEM IRON
REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE MATURE PROTEIN BEGINS AT E44 WITH RESPECT TO B9W4V6. REMARK 999 CRYSTALLIZED PROTEIN BEGINS AT L47, THAT IS L4 IN THE REMARK 999 COORDINATE FILE, DUE TO PROTEOLYTIC CLEAVAGE.
DBREF 2YOR A 4 328 UNP B9W4V6 APO1_AGRAE 47 371 DBREF 2YOR B 4 328 UNP B9W4V6 APO1_AGRAE 47 371
SEQRES 1 A 325 LEU PRO PRO GLY PRO LEU GLU ASN SER SER ALA LYS LEU SEQRES 2 A 325 VAL ASN ASP GLU ALA HIS PRO TRP LYS PRO LEU ARG PRO SEQRES 3 A 325 GLY ASP ILE ARG GLY PRO CYS PRO GLY LEU ASN THR LEU SEQRES 4 A 325 ALA SER HIS GLY TYR LEU PRO ARG ASN GLY VAL ALA THR SEQRES 5 A 325 PRO VAL GLN ILE ILE ASN ALA VAL GLN GLU GLY LEU ASN SEQRES 6 A 325 PHE ASP ASN GLN ALA ALA VAL PHE ALA THR TYR ALA ALA SEQRES 7 A 325 HIS LEU VAL ASP GLY ASN LEU ILE THR ASP LEU LEU SER SEQRES 8 A 325 ILE GLY ARG LYS THR ARG LEU THR GLY PRO ASP PRO PRO SEQRES 9 A 325 PRO PRO ALA SER VAL GLY GLY LEU ASN GLU HIS GLY THR SEQRES 10 A 325 PHE GLU GLY ASP ALA SER MET THR ARG GLY ASP ALA PHE SEQRES 11 A 325 PHE GLY ASN ASN HIS ASP PHE ASN GLU THR LEU PHE GLU SEQRES 12 A 325 GLN LEU VAL ASP TYR SER ASN ARG PHE GLY GLY GLY LYS SEQRES 13 A 325 TYR ASN LEU THR VAL ALA GLY GLU LEU ARG PHE LYS ARG SEQRES 14 A 325 ILE GLN ASP SER ILE ALA THR ASN PRO ASN PHE SER PHE SEQRES 15 A 325 VAL ASP PHE ARG PHE PHE THR ALA TYR GLY GLU THR THR SEQRES 16 A 325 PHE PRO ALA ASN LEU PHE VAL ASP GLY ARG ARG ASP ASP SEQRES 17 A 325 GLY GLN LEU ASP MET ASP ALA ALA ARG SER PHE PHE GLN SEQRES 18 A 325 PHE SER ARG MET PRO ASP ASP PHE PHE ARG ALA PRO SER SEQRES 19 A 325 PRO ARG SER GLY THR GLY VAL GLU VAL VAL ILE GLN ALA SEQRES 20 A 325 HIS PRO MET GLN PRO GLY ARG ASN VAL GLY LYS ILE ASN SEQRES 21 A 325 SER TYR THR VAL ASP PRO THR SER SER ASP PHE SER THR SEQRES 22 A 325 PRO CYS LEU MET TYR GLU LYS PHE VAL ASN ILE THR VAL SEQRES 23 A 325 LYS SER LEU TYR PRO ASN PRO THR VAL GLN LEU ARG LYS SEQRES 24 A 325 ALA LEU ASN THR ASN LEU ASP PHE PHE PHE GLN GLY VAL SEQRES 25 A 325 ALA ALA GLY CYS THR GLN VAL PHE PRO TYR GLY ARG ASP SEQRES 1 B 325 LEU PRO PRO GLY PRO LEU GLU ASN SER SER ALA LYS LEU SEQRES 2 B 325 VAL ASN ASP GLU ALA HIS PRO TRP LYS PRO LEU ARG PRO SEQRES 3 B 325 GLY ASP ILE ARG GLY PRO CYS PRO GLY LEU ASN THR LEU SEQRES 4 B 325 ALA SER HIS GLY TYR LEU PRO ARG ASN GLY VAL ALA THR SEQRES 5 B 325 PRO VAL GLN ILE ILE ASN ALA VAL GLN GLU GLY LEU ASN SEQRES 6 B 325 PHE ASP ASN GLN ALA ALA VAL PHE ALA THR TYR ALA ALA SEQRES 7 B 325 HIS LEU VAL ASP GLY ASN LEU ILE THR ASP LEU LEU SER SEQRES 8 B 325 ILE GLY ARG LYS THR ARG LEU THR GLY PRO ASP PRO PRO SEQRES 9 B 325 PRO PRO ALA SER VAL GLY GLY LEU ASN GLU HIS GLY THR SEQRES 10 B 325 PHE GLU GLY ASP ALA SER MET THR ARG GLY ASP ALA PHE SEQRES 11 B 325 PHE GLY ASN ASN HIS ASP PHE ASN GLU THR LEU PHE GLU SEQRES 12 B 325 GLN LEU VAL ASP TYR SER ASN ARG PHE GLY GLY GLY LYS SEQRES 13 B 325 TYR ASN LEU THR VAL ALA GLY GLU LEU ARG PHE LYS ARG SEQRES 14 B 325 ILE GLN ASP SER ILE ALA THR ASN PRO ASN PHE SER PHE SEQRES 15 B 325 VAL ASP PHE ARG PHE PHE THR ALA TYR GLY GLU THR THR SEQRES 16 B 325 PHE PRO ALA ASN LEU PHE VAL ASP GLY ARG ARG ASP ASP SEQRES 17 B 325 GLY GLN LEU ASP MET ASP ALA ALA ARG SER PHE PHE GLN SEQRES 18 B 325 PHE SER ARG MET PRO ASP ASP PHE PHE ARG ALA PRO SER SEQRES 19 B 325 PRO ARG SER GLY THR GLY VAL GLU VAL VAL ILE GLN ALA SEQRES 20 B 325 HIS PRO MET GLN PRO GLY ARG ASN VAL GLY LYS ILE ASN SEQRES 21 B 325 SER TYR THR VAL ASP PRO THR SER SER ASP PHE SER THR SEQRES 22 B 325 PRO CYS LEU MET TYR GLU LYS PHE VAL ASN ILE THR VAL SEQRES 23 B 325 LYS SER LEU TYR PRO ASN PRO THR VAL GLN LEU ARG LYS SEQRES 24 B 325 ALA LEU ASN THR ASN LEU ASP PHE PHE PHE GLN GLY VAL SEQRES 25 B 325 ALA ALA GLY CYS THR GLN VAL PHE PRO TYR GLY ARG ASP
HET HEM A 350 43 HET MG A 353 1 HET MZ0 A 354 7 HET NAG A 361 14 HET NAG A 362 14 HET BMA A 363 11 HET NAG A 371 14 HET NAG A 372 14 HET BMA A 373 11 HET MAN A 374 11 HET MAN A 375 11 HET NAG A 381 14 HET NAG A 382 14 HET BMA A 383 11 HET NAG A 391 14 HET NAG A 401 14 HET NAG A 411 14 HET BMA A 501 12 HET SO4 A1355 5 HET CL A1356 1 HET SO4 A1357 5 HET SO4 A1358 5 HET HEM B 350 43 HET MG B 353 1 HET MZ0 B 354 7 HET NAG B 361 14 HET NAG B 362 14 HET BMA B 363 11 HET MAN B 364 11 HET MAN B 365 11 HET MAN B 366 11 HET MAN B 367 11 HET MAN B 368 11 HET NAG B 371 14 HET NAG B 372 14 HET NAG B 381 14 HET NAG B 382 14 HET NAG B 391 14 HET NAG B 392 14 HET NAG B 401 14 HET NAG B 402 14 HET NAG B 411 14 HET BMA B 501 12 HET NAG B 511 15 HET TRS B1355 8 HET CL B1356 1 HET SO4 B1357 5 HET CL B1358 1 HET SO4 B1359 5 HET SO4 B1360 5 HET CL B1361 1
HETNAM MG MAGNESIUM ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM SO4 SULFATE ION HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM CL CHLORIDE ION HETNAM BMA BETA-D-MANNOSE HETNAM MAN ALPHA-D-MANNOSE HETNAM MZ0 1H-IMIDAZOL-5-YLMETHANOL
HETSYN TRS TRIS BUFFER HETSYN HEM HEME HETSYN MZ0 4(5)-(HYDROXYMETHYL)IMIDAZOLE
FORMUL 3 MG 2(MG 2+) FORMUL 4 TRS C4 H12 N O3 1+ FORMUL 5 NAG 21(C8 H15 N O6) FORMUL 6 MAN 7(C6 H12 O6) FORMUL 7 BMA 6(C6 H12 O6) FORMUL 8 MZ0 2(C4 H6 N2 O) FORMUL 9 SO4 6(O4 S 2-) FORMUL 10 HEM 2(C34 H32 FE N4 O4) FORMUL 11 CL 4(CL 1-) FORMUL 12 HOH *643(H2 O)
HELIX 1 1 CYS A 36 HIS A 45 1 10 HELIX 2 2 THR A 55 ASN A 68 1 14 HELIX 3 3 ASP A 70 GLY A 86 1 17 HELIX 4 4 THR A 99 GLY A 103 5 5 HELIX 5 5 ASP A 131 GLY A 135 5 5 HELIX 6 6 ASN A 141 GLY A 156 1 16 HELIX 7 7 ASN A 161 ASN A 180 1 20 HELIX 8 8 VAL A 186 THR A 197 1 12 HELIX 9 9 THR A 198 PHE A 204 1 7 HELIX 10 10 ASP A 215 SER A 226 1 12 HELIX 11 11 GLY A 243 HIS A 251 1 9 HELIX 12 12 THR A 276 ILE A 287 1 12 HELIX 13 13 ILE A 287 TYR A 293 1 7 HELIX 14 14 THR A 297 GLY A 314 1 18 HELIX 15 15 CYS B 36 HIS B 45 1 10 HELIX 16 16 THR B 55 ASN B 68 1 14 HELIX 17 17 ASP B 70 GLY B 86 1 17 HELIX 18 18 THR B 99 GLY B 103 5 5 HELIX 19 19 ASP B 131 GLY B 135 5 5 HELIX 20 20 ASN B 141 GLY B 156 1 16 HELIX 21 21 ASN B 161 ASN B 180 1 20 HELIX 22 22 VAL B 186 PHE B 204 1 19 HELIX 23 23 ASP B 215 PHE B 225 1 11 HELIX 24 24 GLY B 243 HIS B 251 1 9 HELIX 25 25 THR B 276 ILE B 287 1 12 HELIX 26 26 ILE B 287 TYR B 293 1 7 HELIX 27 27 THR B 297 GLY B 314 1 18
SHEET 1 AA 2 VAL A 53 ALA A 54 0 SHEET 2 AA 2 LEU A 93 SER A 94 -1 O LEU A 93 N ALA A 54 SHEET 1 AB 3 SER A 184 PHE A 185 0 SHEET 2 AB 3 GLY A 256 ARG A 257 -1 O GLY A 256 N PHE A 185 SHEET 3 AB 3 THR A 266 VAL A 267 -1 O THR A 266 N ARG A 257 SHEET 1 BA 2 VAL B 53 ALA B 54 0 SHEET 2 BA 2 LEU B 93 SER B 94 -1 O LEU B 93 N ALA B 54 SHEET 1 BB 3 SER B 184 PHE B 185 0 SHEET 2 BB 3 GLY B 256 ARG B 257 -1 O GLY B 256 N PHE B 185 SHEET 3 BB 3 THR B 266 VAL B 267 -1 O THR B 266 N ARG B 257
SSBOND 1 CYS A 278 CYS A 319 1555 1555 2.06 SSBOND 2 CYS B 278 CYS B 319 1555 1555 2.07
LINK ND2 ASN A 11 C1 NAG A 411 1555 1555 1.45 LINK ND2 ASN A 141 C1 NAG A 361 1555 1555 1.45 LINK ND2 ASN A 161 C1 NAG A 371 1555 1555 1.45 LINK ND2 ASN A 182 C1 NAG A 381 1555 1555 1.45 LINK ND2 ASN A 286 C1 NAG A 391 1555 1555 1.48 LINK ND2 ASN A 295 C1 NAG A 401 1555 1555 1.45 LINK FE HEM A 350 SG CYS A 36 1555 1555 2.29 LINK FE HEM A 350 N3 MZ0 A 354 1555 1555 2.36 LINK MG MG A 353 O HOH A2152 1555 1555 2.13 LINK MG MG A 353 O HOH A2151 1555 1555 1.86 LINK MG MG A 353 OG SER A 126 1555 1555 2.08 LINK MG MG A 353 O GLY A 123 1555 1555 2.16 LINK MG MG A 353 OE2 GLU A 122 1555 1555 1.95 LINK MG MG A 353 O1A HEM A 350 1555 1555 2.10 LINK O4 NAG A 361 C1 NAG A 362 1555 1555 1.45 LINK O4 NAG A 362 C1 BMA A 363 1555 1555 1.44 LINK O4 NAG A 371 C1 NAG A 372 1555 1555 1.44 LINK O4 NAG A 372 C1 BMA A 373 1555 1555 1.44 LINK O6 BMA A 373 C1 MAN A 375 1555 1555 1.45 LINK O3 BMA A 373 C1 MAN A 374 1555 1555 1.45 LINK O4 NAG A 381 C1 NAG A 382 1555 1555 1.45 LINK O4 NAG A 382 C1 BMA A 383 1555 1555 1.43 LINK ND2 ASN B 11 C1 NAG B 411 1555 1555 1.44 LINK ND2 ASN B 141 C1 NAG B 361 1555 1555 1.45 LINK ND2 ASN B 161 C1 NAG B 371 1555 1555 1.44 LINK ND2 ASN B 182 C1 NAG B 381 1555 1555 1.44 LINK ND2 ASN B 286 C1 NAG B 391 1555 1555 1.45 LINK ND2 ASN B 295 C1 NAG B 401 1555 1555 1.45 LINK FE HEM B 350 SG CYS B 36 1555 1555 2.36 LINK FE HEM B 350 N3 MZ0 B 354 1555 1555 2.34 LINK MG MG B 353 OG SER B 126 1555 1555 2.09 LINK MG MG B 353 O HOH B2125 1555 1555 2.15 LINK MG MG B 353 O GLY B 123 1555 1555 2.18 LINK MG MG B 353 OE2 GLU B 122 1555 1555 2.12 LINK MG MG B 353 O1A HEM B 350 1555 1555 2.06 LINK MG MG B 353 O HOH B2126 1555 1555 2.22 LINK O4 NAG B 361 C1 NAG B 362 1555 1555 1.43 LINK O4 NAG B 362 C1 BMA B 363 1555 1555 1.44 LINK O6 BMA B 363 C1 MAN B 365 1555 1555 1.44 LINK O3 BMA B 363 C1 MAN B 364 1555 1555 1.45 LINK O6 MAN B 365 C1 MAN B 366 1555 1555 1.44 LINK O3 MAN B 365 C1 MAN B 367 1555 1555 1.44 LINK O2 MAN B 366 C1 MAN B 368 1555 1555 1.44 LINK O4 NAG B 371 C1 NAG B 372 1555 1555 1.41 LINK O4 NAG B 381 C1 NAG B 382 1555 1555 1.46 LINK O4 NAG B 391 C1 NAG B 392 1555 1555 1.44 LINK O4 NAG B 401 C1 NAG B 402 1555 1555 1.45
CISPEP 1 PRO A 108 PRO A 109 0 11.37 CISPEP 2 PRO B 108 PRO B 109 0 5.22
SITE 1 AC1 19 CYS A 36 GLY A 38 LEU A 39 LEU A 67 SITE 2 AC1 19 PHE A 69 ALA A 77 THR A 78 PHE A 121 SITE 3 AC1 19 GLU A 122 GLY A 123 SER A 126 MET A 127 SITE 4 AC1 19 THR A 128 ARG A 189 GLU A 196 PHE A 199 SITE 5 AC1 19 MG A 353 MZ0 A 354 HOH A2152 SITE 1 AC2 6 GLU A 122 GLY A 123 SER A 126 HEM A 350 SITE 2 AC2 6 HOH A2151 HOH A2152 SITE 1 AC3 7 ALA A 77 THR A 192 GLU A 196 PHE A 199 SITE 2 AC3 7 HEM A 350 HOH A2096 HOH A2318 SITE 1 AC4 10 PRO A 5 VAL A 57 TYR A 79 ASP A 91 SITE 2 AC4 10 THR A 306 ASN A 307 PHE A 310 HOH A2077 SITE 3 AC4 10 HOH A2297 HOH A2344 SITE 1 AC5 3 THR A 297 VAL A 298 HOH A2345 SITE 1 AC6 4 PRO A 8 ASP A 70 ASN A 71 HOH A2008 SITE 1 AC7 5 ARG A 97 THR A 99 ARG A 100 HOH A2118 SITE 2 AC7 5 HOH A2346 SITE 1 AC8 3 TYR A 151 ARG A 154 LYS A 171 SITE 1 AC9 23 PRO B 35 CYS B 36 PRO B 37 LEU B 39 SITE 2 AC9 23 VAL B 63 LEU B 67 ALA B 77 THR B 78 SITE 3 AC9 23 PHE B 121 GLU B 122 GLY B 123 SER B 126 SITE 4 AC9 23 MET B 127 THR B 128 ARG B 189 GLU B 196 SITE 5 AC9 23 PHE B 199 LEU B 203 MG B 353 MZ0 B 354 SITE 6 AC9 23 HOH B2044 HOH B2126 HOH B2162 SITE 1 BC1 6 GLU B 122 GLY B 123 SER B 126 HEM B 350 SITE 2 BC1 6 HOH B2125 HOH B2126 SITE 1 BC2 7 ALA B 77 THR B 192 GLU B 196 PHE B 199 SITE 2 BC2 7 HEM B 350 HOH B2076 HOH B2266 SITE 1 BC3 6 LEU B 88 ILE B 89 ASP B 91 ALA B 303 SITE 2 BC3 6 THR B 306 HOH B2092 SITE 1 BC4 9 ASN B 182 SER B 184 VAL B 186 ASP B 187 SITE 2 BC4 9 ARG B 257 HOH B2169 HOH B2174 HOH B2285 SITE 3 BC4 9 HOH B2290 SITE 1 BC5 2 ASN B 61 CL B1358 SITE 1 BC6 4 ASP B 70 ASN B 71 PRO B 238 HOH B2008 SITE 1 BC7 5 ARG B 97 HIS B 138 HOH B2038 HOH B2040 SITE 2 BC7 5 HOH B2291 SITE 1 BC8 2 GLY B 7 TRS B1355 SITE 1 BC9 5 LYS B 171 MAN B 365 MAN B 366 MAN B 367 SITE 2 BC9 5 HOH B2274 SITE 1 CC1 5 ARG B 97 LYS B 98 THR B 99 ARG B 100 SITE 2 CC1 5 HOH B2292 SITE 1 CC2 1 THR B 143 SITE 1 CC3 4 ASN A 11 SER A 13 HOH A2020 HOH A2343 SITE 1 CC4 4 ASN A 141 HOH A2169 HOH A2320 NAG B 401 SITE 1 CC5 19 PHE A 155 GLY A 156 ASN A 161 THR A 163 SITE 2 CC5 19 GLN A 213 HOH A2181 HOH A2323 HOH A2327 SITE 3 CC5 19 HOH A2330 HOH A2331 HOH A2332 HOH A2333 SITE 4 CC5 19 HOH A2334 GLU B 146 ASP B 150 ASN B 153 SITE 5 CC5 19 CYS B 278 ALA B 317 CYS B 319 SITE 1 CC6 8 PHE A 133 ASN A 182 HOH A2161 HOH A2163 SITE 2 CC6 8 HOH A2335 HOH A2336 HOH A2337 HOH A2339 SITE 1 CC7 1 ASN A 286 SITE 1 CC8 5 PRO A 294 ASN A 295 HOH A2340 HOH A2341 SITE 2 CC8 5 HOH A2342 SITE 1 CC9 3 ASN B 11 SER B 13 HOH B2288 SITE 1 DC1 31 LEU B 16 PHE B 133 PHE B 134 ASN B 141 SITE 2 DC1 31 LYS B 171 GLN B 174 ASP B 175 THR B 179 SITE 3 DC1 31 PRO B 181 ASP B 231 SO4 B1359 HOH B2145 SITE 4 DC1 31 HOH B2163 HOH B2200 HOH B2218 HOH B2267 SITE 5 DC1 31 HOH B2268 HOH B2269 HOH B2270 HOH B2271 SITE 6 DC1 31 HOH B2272 HOH B2273 HOH B2274 HOH B2275 SITE 7 DC1 31 HOH B2276 HOH B2277 HOH B2278 HOH B2279 SITE 8 DC1 31 HOH B2280 HOH B2281 HOH B2282 SITE 1 DC2 12 CYS A 278 GLU A 282 ALA A 317 CYS A 319 SITE 2 DC2 12 HOH A2313 PHE B 155 GLY B 156 ASN B 161 SITE 3 DC2 12 THR B 163 GLN B 213 HOH B2153 HOH B2157 SITE 1 DC3 4 PHE B 133 ASN B 182 HOH B2284 HOH B2286 SITE 1 DC4 5 HOH A2329 GLU B 282 ASN B 286 VAL B 322 SITE 2 DC4 5 HOH B2262 SITE 1 DC5 4 BMA A 363 PRO B 294 ASN B 295 HOH B2240
CRYST1 77.290 95.030 127.200 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.012938 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010523 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007862 0.00000
MTRIX1 1 0.039960 -0.994150 0.100330 1.86543 1
MTRIX2 1 -0.995330 -0.048430 -0.083480 27.07028 1
MTRIX3 1 0.087850 -0.096530 -0.991450 268.24673 1