10 20 30 40 50 60 70 80 2WT2 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER VIRAL PROTEIN 10-SEP-09 2WT2
TITLE GALECTIN DOMAIN OF PORCINE ADENOVIRUS TYPE 4 NADC-1 ISOLATE FIBRE TITLE 2 COMPLEXED WITH TRI(N-ACETYL-LACTOSAMINE)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE FIBER PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: GALECTIN DOMAIN, RESIDUES 393-703; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PORCINE ADENOVIRUS 4; SOURCE 3 ORGANISM_TAXID: 35267; SOURCE 4 VARIANT: NADC-1 ISOLATE; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28C
KEYWDS VIRAL PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR P.GUARDADO-CALVO,E.M.MUNOZ,A.L.LLAMAS-SAIZ,G.C.FOX,J.N.GLASGOW, AUTHOR 2 M.J.VAN RAAIJ
REVDAT 3 13-APR-11 2WT2 1 REMARK REVDAT 2 29-SEP-10 2WT2 1 JRNL REVDAT 1 11-AUG-10 2WT2 0
JRNL AUTH P.GUARDADO-CALVO,E.M.MUNOZ,A.L.LLAMAS-SAIZ,G.C.FOX,R.KAHN, JRNL AUTH 2 D.T.CURIEL,J.N.GLASGOW,M.J.VAN RAAIJ JRNL TITL CRYSTALLOGRAPHIC STRUCTURE OF PORCINE ADENOVIRUS 4 FIBRE 2 JRNL TITL 2 HEAD AND GALECTIN DOMAINS. JRNL REF J.VIROL. V. 84 10558 2010 JRNL REFN ISSN 0022-538X JRNL PMID 20686025 JRNL DOI 10.1128/JVI.00997-10
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.B.KLEIBOEKER REMARK 1 TITL SEQUENCE ANALYSIS OF THE FIBER GENOMIC REGION OF A PORCINE REMARK 1 TITL 2 ADENOVIRUS PREDICTS A NOVEL FIBER PROTEIN. REMARK 1 REF VIRUS RES. V. 39 299 1995 REMARK 1 REFN ISSN 0168-1702 REMARK 1 PMID 8837892 REMARK 1 DOI 10.1016/0168-1702(95)00079-8 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.P.L.PAUL,M.EVERTS,J.N.GLASGOW,P.DENT,P.B.FISHER, REMARK 1 AUTH 2 I.V.ULASOV,M.S.LESNIAK,M.A.STOFF-KHALILI,J.C.ROTH, REMARK 1 AUTH 3 M.A.PREUSS,C.M.F.DIRVEN,M.L.M.LAMFERS,G.P.SIEGAL,Z.B.ZHU, REMARK 1 AUTH 4 D.T.CURIEL REMARK 1 TITL CHARACTERIZATION OF INFECTIVITY OF KNOB-MODIFIED ADENOVIRAL REMARK 1 TITL 2 VECTORS IN GLIOMA. REMARK 1 REF CANCER BIOL.THER. V. 7 786 2008 REMARK 1 REFN ISSN 1538-4047 REMARK 1 PMID 18756624 REMARK 1 REFERENCE 3 REMARK 1 AUTH P.GUARDADO-CALVO,A.L.LLAMAS-SAIZ,G.C.FOX,J.N.GLASGOW, REMARK 1 AUTH 2 M.J.VAN RAAIJ REMARK 1 TITL CRYSTALLISATION OF THE HEAD AND GALECTIN-LIKE DOMAINS OF REMARK 1 TITL 2 PORCINE ADENOVIRUS ISOLATE NADC-1 FIBRE REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 65 1149 2009 REMARK 1 REFN ISSN 1744-3091 REMARK 1 PMID 19923738 REMARK 1 DOI 10.1107/S1744309109038287
REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0070 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 100.00 REMARK 3 NUMBER OF REFLECTIONS : 19313 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS REMARK 3 R VALUE (WORKING + TEST SET) : 0.20365 REMARK 3 R VALUE (WORKING SET) : 0.19989 REMARK 3 FREE R VALUE : 0.26790 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.5 REMARK 3 FREE R VALUE TEST SET COUNT : 1123 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.500 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.634 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2789 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.324 REMARK 3 BIN FREE R VALUE SET COUNT : 129 REMARK 3 BIN FREE R VALUE : 0.355 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4708 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 176 REMARK 3 SOLVENT ATOMS : 129 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.8 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.572 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.01 REMARK 3 B22 (A**2) : -2.17 REMARK 3 B33 (A**2) : 3.15 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : -0.34 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.348 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.268 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.229 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5022 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3352 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6882 ; 1.274 ; 2.012 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8178 ; 0.783 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 598 ; 6.902 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 212 ;35.914 ;23.868 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 750 ;13.329 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;14.491 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 820 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5404 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 960 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 778 ; 0.181 ; 0.020 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3301 ; 0.185 ; 0.020 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2354 ; 0.172 ; 0.020 REMARK 3 NON-BONDED TORSION OTHERS (A): 2705 ; 0.081 ; 0.020 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 190 ; 0.148 ; 0.020 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 26 ; 0.156 ; 0.020 REMARK 3 SYMMETRY VDW OTHERS (A): 68 ; 0.206 ; 0.020 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.167 ; 0.020 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3030 ; 1.875 ; 5.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1184 ; 0.508 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4944 ; 2.950 ; 7.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1992 ; 2.906 ; 7.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1938 ; 4.226 ; 9.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 386 A 391 REMARK 3 ORIGIN FOR THE GROUP (A): 3.7490 -5.4590 -47.4540 REMARK 3 T TENSOR REMARK 3 T11: 0.5118 T22: 0.5626 REMARK 3 T33: 0.5162 T12: -0.1583 REMARK 3 T13: 0.0536 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 21.2627 L22: 4.7585 REMARK 3 L33: 27.0888 L12: 4.3456 REMARK 3 L13: -5.2904 L23: 8.5356 REMARK 3 S TENSOR REMARK 3 S11: -0.6828 S12: 0.1091 S13: -0.2141 REMARK 3 S21: -0.8131 S22: 0.8124 S23: -0.2452 REMARK 3 S31: -1.0112 S32: 1.2855 S33: -0.1296 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 392 A 525 REMARK 3 ORIGIN FOR THE GROUP (A): 13.7730 -15.7470 -30.9040 REMARK 3 T TENSOR REMARK 3 T11: 0.0731 T22: 0.1741 REMARK 3 T33: 0.1120 T12: -0.0180 REMARK 3 T13: 0.0123 T23: 0.0257 REMARK 3 L TENSOR REMARK 3 L11: 4.1382 L22: 5.1805 REMARK 3 L33: 5.3880 L12: -1.4521 REMARK 3 L13: -0.6159 L23: 0.5116 REMARK 3 S TENSOR REMARK 3 S11: -0.1161 S12: -0.6313 S13: -0.0756 REMARK 3 S21: 0.5845 S22: 0.0692 S23: 0.1121 REMARK 3 S31: 0.0166 S32: -0.1349 S33: 0.0469 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 526 A 543 REMARK 3 ORIGIN FOR THE GROUP (A): 2.5050 -24.0080 -40.3590 REMARK 3 T TENSOR REMARK 3 T11: 0.7304 T22: 0.7274 REMARK 3 T33: 0.6562 T12: -0.5727 REMARK 3 T13: 0.2706 T23: -0.2541 REMARK 3 L TENSOR REMARK 3 L11: 4.5592 L22: 13.3937 REMARK 3 L33: 6.8529 L12: 3.7628 REMARK 3 L13: 4.4050 L23: -1.2814 REMARK 3 S TENSOR REMARK 3 S11: 0.2810 S12: -0.6705 S13: 0.4109 REMARK 3 S21: 0.4411 S22: -0.3161 S23: 1.4203 REMARK 3 S31: 0.6264 S32: -1.1381 S33: 0.0351 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 544 A 685 REMARK 3 ORIGIN FOR THE GROUP (A): 32.4520 -9.7800 -46.9420 REMARK 3 T TENSOR REMARK 3 T11: 0.0353 T22: 0.0770 REMARK 3 T33: 0.0459 T12: -0.0101 REMARK 3 T13: 0.0165 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 5.3285 L22: 2.7757 REMARK 3 L33: 1.4856 L12: -1.3569 REMARK 3 L13: 0.2019 L23: 0.2009 REMARK 3 S TENSOR REMARK 3 S11: 0.0574 S12: 0.1928 S13: 0.0332 REMARK 3 S21: -0.1016 S22: 0.0538 S23: -0.0914 REMARK 3 S31: -0.0680 S32: 0.1462 S33: -0.1112 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 386 B 391 REMARK 3 ORIGIN FOR THE GROUP (A): 2.2750 9.6750 -4.6640 REMARK 3 T TENSOR REMARK 3 T11: 0.2356 T22: 0.3117 REMARK 3 T33: 0.3666 T12: -0.1128 REMARK 3 T13: -0.0164 T23: 0.0821 REMARK 3 L TENSOR REMARK 3 L11: 15.4978 L22: 19.3339 REMARK 3 L33: 19.0612 L12: -11.7716 REMARK 3 L13: 12.9256 L23: -0.8124 REMARK 3 S TENSOR REMARK 3 S11: -0.3243 S12: -0.8113 S13: -0.0227 REMARK 3 S21: -0.5091 S22: 1.3814 S23: -0.7347 REMARK 3 S31: -0.8329 S32: -0.2009 S33: -1.0570 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 392 B 525 REMARK 3 ORIGIN FOR THE GROUP (A): 12.3120 -0.5850 12.2100 REMARK 3 T TENSOR REMARK 3 T11: 0.0534 T22: 0.1809 REMARK 3 T33: 0.0677 T12: -0.0092 REMARK 3 T13: -0.0162 T23: 0.0323 REMARK 3 L TENSOR REMARK 3 L11: 4.0770 L22: 4.8550 REMARK 3 L33: 4.8787 L12: -1.0694 REMARK 3 L13: -0.8525 L23: 0.5340 REMARK 3 S TENSOR REMARK 3 S11: -0.0669 S12: -0.5896 S13: -0.1058 REMARK 3 S21: 0.4911 S22: 0.1203 S23: -0.1451 REMARK 3 S31: 0.0210 S32: -0.0785 S33: -0.0534 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 526 B 543 REMARK 3 ORIGIN FOR THE GROUP (A): 0.9260 -8.7200 2.9320 REMARK 3 T TENSOR REMARK 3 T11: 0.0805 T22: 0.5246 REMARK 3 T33: 0.5735 T12: -0.1366 REMARK 3 T13: -0.0523 T23: -0.2559 REMARK 3 L TENSOR REMARK 3 L11: 3.7999 L22: 12.3866 REMARK 3 L33: 9.7051 L12: 0.7302 REMARK 3 L13: 1.3770 L23: -1.6301 REMARK 3 S TENSOR REMARK 3 S11: -0.1091 S12: 0.4250 S13: -0.5609 REMARK 3 S21: 0.2573 S22: -0.7590 S23: 1.1042 REMARK 3 S31: 0.0552 S32: -1.4287 S33: 0.8681 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 544 B 685 REMARK 3 ORIGIN FOR THE GROUP (A): 30.7950 5.4730 -3.9090 REMARK 3 T TENSOR REMARK 3 T11: 0.0313 T22: 0.0632 REMARK 3 T33: 0.0830 T12: -0.0088 REMARK 3 T13: 0.0304 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 5.0517 L22: 4.5471 REMARK 3 L33: 1.5084 L12: -1.4703 REMARK 3 L13: -0.4007 L23: 0.1506 REMARK 3 S TENSOR REMARK 3 S11: 0.0947 S12: 0.2290 S13: 0.1184 REMARK 3 S21: -0.1110 S22: -0.0163 S23: -0.1540 REMARK 3 S31: -0.1401 S32: 0.1459 S33: -0.0784 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED
REMARK 4 REMARK 4 2WT2 COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-SEP-09. REMARK 100 THE PDBE ID CODE IS EBI-41115.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.815 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : BENT, VERTICALLY FOCUSSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : FLATPANEL REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20441 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.50 REMARK 200 RESOLUTION RANGE LOW (A) : 40.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.6 REMARK 200 R MERGE (I) : 0.10 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.80 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.6 REMARK 200 R MERGE FOR SHELL (I) : 0.43 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.10 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2WSU, CHAIN A REMARK 200 REMARK 200 REMARK: NONE
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.9 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MM TRIS-HCL, 1 MM EDTA, 28% (W/V) REMARK 280 POLY-ETHYLENE GLYCOL 3350, 300 MM LITHIUM NITRATE, 5 MM REMARK 280 DITHIOTHREITOL, 5 MM TRI(N-ACETYL-LACTOSAMINE), PH 8.0
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 88.06500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.13000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 88.06500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 19.13000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2004 LIES ON A SPECIAL POSITION.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 361 REMARK 465 GLY A 362 REMARK 465 SER A 363 REMARK 465 SER A 364 REMARK 465 HIS A 365 REMARK 465 HIS A 366 REMARK 465 HIS A 367 REMARK 465 HIS A 368 REMARK 465 HIS A 369 REMARK 465 HIS A 370 REMARK 465 SER A 371 REMARK 465 SER A 372 REMARK 465 GLY A 373 REMARK 465 LEU A 374 REMARK 465 VAL A 375 REMARK 465 PRO A 376 REMARK 465 ARG A 377 REMARK 465 GLY A 378 REMARK 465 SER A 379 REMARK 465 HIS A 380 REMARK 465 MET A 381 REMARK 465 ALA A 382 REMARK 465 SER A 383 REMARK 465 MET A 384 REMARK 465 THR A 385 REMARK 465 ASP A 686 REMARK 465 THR A 687 REMARK 465 PRO A 688 REMARK 465 VAL A 689 REMARK 465 PHE A 690 REMARK 465 SER A 691 REMARK 465 THR A 692 REMARK 465 ALA A 693 REMARK 465 GLY A 694 REMARK 465 VAL A 695 REMARK 465 SER A 696 REMARK 465 LYS A 697 REMARK 465 VAL A 698 REMARK 465 TYR A 699 REMARK 465 PRO A 700 REMARK 465 GLN A 701 REMARK 465 ILE A 702 REMARK 465 LEU A 703 REMARK 465 MET B 361 REMARK 465 GLY B 362 REMARK 465 SER B 363 REMARK 465 SER B 364 REMARK 465 HIS B 365 REMARK 465 HIS B 366 REMARK 465 HIS B 367 REMARK 465 HIS B 368 REMARK 465 HIS B 369 REMARK 465 HIS B 370 REMARK 465 SER B 371 REMARK 465 SER B 372 REMARK 465 GLY B 373 REMARK 465 LEU B 374 REMARK 465 VAL B 375 REMARK 465 PRO B 376 REMARK 465 ARG B 377 REMARK 465 GLY B 378 REMARK 465 SER B 379 REMARK 465 HIS B 380 REMARK 465 MET B 381 REMARK 465 ALA B 382 REMARK 465 SER B 383 REMARK 465 MET B 384 REMARK 465 THR B 385 REMARK 465 ASP B 686 REMARK 465 THR B 687 REMARK 465 PRO B 688 REMARK 465 VAL B 689 REMARK 465 PHE B 690 REMARK 465 SER B 691 REMARK 465 THR B 692 REMARK 465 ALA B 693 REMARK 465 GLY B 694 REMARK 465 VAL B 695 REMARK 465 SER B 696 REMARK 465 LYS B 697 REMARK 465 VAL B 698 REMARK 465 TYR B 699 REMARK 465 PRO B 700 REMARK 465 GLN B 701 REMARK 465 ILE B 702 REMARK 465 LEU B 703
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1 NO3 A 1687 O HOH A 2059 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 394 -35.34 -133.47 REMARK 500 GLU A 473 -9.29 79.28 REMARK 500 ASP A 514 54.38 -94.03 REMARK 500 HIS A 584 146.06 -171.43 REMARK 500 ASP A 586 60.66 -118.37 REMARK 500 PHE B 394 -38.83 -131.82 REMARK 500 GLU B 473 -6.41 70.12 REMARK 500 ASP B 586 63.04 -107.87 REMARK 500 ARG B 640 -164.08 -100.29 REMARK 500 REMARK 500 REMARK: NULL
REMARK 600 REMARK 600 HETEROGEN REMARK 600 BETA-D-GALACTOSE (GAL): PART OF POLYMER REMARK 600 N-ACETYL-D-GLUCOSAMINE (NAG): PART OF POLYMER
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A1686 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A1687 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A1688 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B1686 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B1687 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B1688 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL B1689 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG B1690 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL B1691 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG B1692 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL B1693 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG B1694 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL A1689 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A1690 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL A1691 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A1692 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL A1693 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A1694
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WT0 RELATED DB: PDB REMARK 900 GALECTIN DOMAIN OF PORCINE ADENOVIRUS TYPE 4 NADC-1 ISOLATE REMARK 900 FIBRE COMPLEXED WITH N- ACETYL-LACTOSAMINE REMARK 900 RELATED ID: 2WT1 RELATED DB: PDB REMARK 900 GALECTIN DOMAIN OF PORCINE ADENOVIRUS TYPE 4 NADC-1 ISOLATE REMARK 900 FIBRE COMPLEXED WITH LACTO -N-NEO-TETRAOSE REMARK 900 RELATED ID: 2WSV RELATED DB: PDB REMARK 900 GALECTIN DOMAIN OF PORCINE ADENOVIRUS TYPE 4 NADC-1 ISOLATE REMARK 900 FIBRE COMPLEXED WITH LACTOSE REMARK 900 RELATED ID: 2WSU RELATED DB: PDB REMARK 900 GALECTIN DOMAIN OF PORCINE ADENOVIRUS TYPE 4 NADC-1 ISOLATE REMARK 900 FIBRE REMARK 900 RELATED ID: 2WST RELATED DB: PDB REMARK 900 HEAD DOMAIN OF PORCINE ADENOVIRUS TYPE 4 NADC-1 ISOLATE REMARK 900 FIBRE
DBREF 2WT2 A 393 703 UNP Q83467 Q83467_ADEP4 393 703 DBREF 2WT2 B 393 703 UNP Q83467 Q83467_ADEP4 393 703
SEQADV 2WT2 MET A 361 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLY A 362 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 SER A 363 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 SER A 364 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS A 365 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS A 366 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS A 367 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS A 368 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS A 369 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS A 370 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 SER A 371 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 SER A 372 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLY A 373 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 LEU A 374 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 VAL A 375 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 PRO A 376 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 ARG A 377 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLY A 378 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 SER A 379 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS A 380 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 MET A 381 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 ALA A 382 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 SER A 383 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 MET A 384 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 THR A 385 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLY A 386 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLY A 387 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLN A 388 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLN A 389 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLY A 390 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 ARG A 391 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 ILE A 392 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 MET B 361 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLY B 362 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 SER B 363 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 SER B 364 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS B 365 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS B 366 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS B 367 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS B 368 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS B 369 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS B 370 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 SER B 371 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 SER B 372 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLY B 373 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 LEU B 374 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 VAL B 375 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 PRO B 376 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 ARG B 377 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLY B 378 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 SER B 379 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 HIS B 380 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 MET B 381 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 ALA B 382 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 SER B 383 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 MET B 384 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 THR B 385 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLY B 386 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLY B 387 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLN B 388 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLN B 389 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 GLY B 390 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 ARG B 391 UNP Q83467 EXPRESSION TAG SEQADV 2WT2 ILE B 392 UNP Q83467 EXPRESSION TAG
SEQRES 1 A 343 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 343 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 A 343 GLY GLN GLN GLY ARG ILE PRO PHE VAL LEU PRO LEU PRO SEQRES 4 A 343 ASP GLY VAL PRO THR GLY ALA SER ILE VAL LEU GLU GLY SEQRES 5 A 343 THR LEU THR PRO SER ALA VAL PHE PHE THR LEU ASP LEU SEQRES 6 A 343 VAL THR GLY PRO ALA SER LEU ALA LEU HIS PHE ASN VAL SEQRES 7 A 343 ARG LEU PRO LEU GLU GLY GLU LYS HIS ILE VAL CYS ASN SEQRES 8 A 343 SER ARG GLU GLY SER SER ASN TRP GLY GLU GLU VAL ARG SEQRES 9 A 343 PRO GLN GLU PHE PRO PHE GLU ARG GLU LYS PRO PHE VAL SEQRES 10 A 343 LEU VAL ILE VAL ILE GLN SER ASP THR TYR GLN ILE THR SEQRES 11 A 343 VAL ASN GLY LYS PRO LEU VAL ASP PHE PRO GLN ARG LEU SEQRES 12 A 343 GLN GLY ILE THR ARG ALA SER LEU SER GLY ASP LEU VAL SEQRES 13 A 343 PHE THR ARG LEU THR MET TYR PRO PRO GLY ASP PRO ARG SEQRES 14 A 343 PRO THR THR LEU LEU PRO PRO PRO ALA ALA PRO LEU ASP SEQRES 15 A 343 VAL ILE PRO ASP ALA TYR VAL LEU ASN LEU PRO THR GLY SEQRES 16 A 343 LEU THR PRO ARG THR LEU LEU THR VAL THR GLY THR PRO SEQRES 17 A 343 THR PRO LEU ALA GLU PHE PHE ILE VAL ASN LEU VAL TYR SEQRES 18 A 343 ASP LEU HIS TYR ASP SER LYS ASN VAL ALA LEU HIS PHE SEQRES 19 A 343 ASN VAL GLY PHE THR SER ASP SER LYS GLY HIS ILE ALA SEQRES 20 A 343 CYS ASN ALA ARG MET ASN GLY THR TRP GLY SER GLU ILE SEQRES 21 A 343 THR VAL SER ASP PHE PRO PHE GLN ARG GLY LYS PRO PHE SEQRES 22 A 343 THR LEU GLN ILE LEU THR ARG GLU ALA ASP PHE GLN VAL SEQRES 23 A 343 LEU VAL ASP LYS GLN PRO LEU THR GLN PHE GLN TYR ARG SEQRES 24 A 343 LEU LYS GLU LEU ASP GLN ILE LYS TYR VAL HIS MET PHE SEQRES 25 A 343 GLY HIS VAL VAL GLN THR HIS LEU GLU HIS GLN VAL PRO SEQRES 26 A 343 ASP THR PRO VAL PHE SER THR ALA GLY VAL SER LYS VAL SEQRES 27 A 343 TYR PRO GLN ILE LEU SEQRES 1 B 343 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 343 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 B 343 GLY GLN GLN GLY ARG ILE PRO PHE VAL LEU PRO LEU PRO SEQRES 4 B 343 ASP GLY VAL PRO THR GLY ALA SER ILE VAL LEU GLU GLY SEQRES 5 B 343 THR LEU THR PRO SER ALA VAL PHE PHE THR LEU ASP LEU SEQRES 6 B 343 VAL THR GLY PRO ALA SER LEU ALA LEU HIS PHE ASN VAL SEQRES 7 B 343 ARG LEU PRO LEU GLU GLY GLU LYS HIS ILE VAL CYS ASN SEQRES 8 B 343 SER ARG GLU GLY SER SER ASN TRP GLY GLU GLU VAL ARG SEQRES 9 B 343 PRO GLN GLU PHE PRO PHE GLU ARG GLU LYS PRO PHE VAL SEQRES 10 B 343 LEU VAL ILE VAL ILE GLN SER ASP THR TYR GLN ILE THR SEQRES 11 B 343 VAL ASN GLY LYS PRO LEU VAL ASP PHE PRO GLN ARG LEU SEQRES 12 B 343 GLN GLY ILE THR ARG ALA SER LEU SER GLY ASP LEU VAL SEQRES 13 B 343 PHE THR ARG LEU THR MET TYR PRO PRO GLY ASP PRO ARG SEQRES 14 B 343 PRO THR THR LEU LEU PRO PRO PRO ALA ALA PRO LEU ASP SEQRES 15 B 343 VAL ILE PRO ASP ALA TYR VAL LEU ASN LEU PRO THR GLY SEQRES 16 B 343 LEU THR PRO ARG THR LEU LEU THR VAL THR GLY THR PRO SEQRES 17 B 343 THR PRO LEU ALA GLU PHE PHE ILE VAL ASN LEU VAL TYR SEQRES 18 B 343 ASP LEU HIS TYR ASP SER LYS ASN VAL ALA LEU HIS PHE SEQRES 19 B 343 ASN VAL GLY PHE THR SER ASP SER LYS GLY HIS ILE ALA SEQRES 20 B 343 CYS ASN ALA ARG MET ASN GLY THR TRP GLY SER GLU ILE SEQRES 21 B 343 THR VAL SER ASP PHE PRO PHE GLN ARG GLY LYS PRO PHE SEQRES 22 B 343 THR LEU GLN ILE LEU THR ARG GLU ALA ASP PHE GLN VAL SEQRES 23 B 343 LEU VAL ASP LYS GLN PRO LEU THR GLN PHE GLN TYR ARG SEQRES 24 B 343 LEU LYS GLU LEU ASP GLN ILE LYS TYR VAL HIS MET PHE SEQRES 25 B 343 GLY HIS VAL VAL GLN THR HIS LEU GLU HIS GLN VAL PRO SEQRES 26 B 343 ASP THR PRO VAL PHE SER THR ALA GLY VAL SER LYS VAL SEQRES 27 B 343 TYR PRO GLN ILE LEU
HET NO3 A1686 4 HET NO3 A1687 4 HET NO3 A1688 4 HET GAL A1689 11 HET NAG A1690 14 HET GAL A1691 11 HET NAG A1692 14 HET GAL A1693 11 HET NAG A1694 15 HET NO3 B1686 4 HET NO3 B1687 4 HET NO3 B1688 4 HET GAL B1689 11 HET NAG B1690 14 HET GAL B1691 11 HET NAG B1692 14 HET GAL B1693 11 HET NAG B1694 15
HETNAM NO3 NITRATE ION HETNAM GAL BETA-D-GALACTOSE HETNAM NAG N-ACETYL-D-GLUCOSAMINE
FORMUL 3 NO3 6(N O3 1-) FORMUL 4 GAL 6(C6 H12 O6) FORMUL 5 NAG 6(C8 H15 N O6) FORMUL 6 HOH *129(H2 O)
HELIX 1 1 GLU A 662 ILE A 666 5 5 HELIX 2 2 GLU B 662 ILE B 666 5 5
SHEET 1 AA 5 VAL A 395 PRO A 397 0 SHEET 2 AA 5 ARG A 508 SER A 512 -1 O ALA A 509 N LEU A 396 SHEET 3 AA 5 PHE A 420 THR A 427 -1 O THR A 422 N SER A 512 SHEET 4 AA 5 SER A 431 ARG A 439 -1 O SER A 431 N THR A 427 SHEET 5 AA 5 HIS A 447 ARG A 453 -1 O HIS A 447 N ARG A 439 SHEET 1 AB 5 PRO A 495 PRO A 500 0 SHEET 2 AB 5 THR A 486 VAL A 491 -1 O TYR A 487 N PHE A 499 SHEET 3 AB 5 LEU A 478 ILE A 482 -1 O VAL A 479 N THR A 490 SHEET 4 AB 5 SER A 407 LEU A 414 -1 O ILE A 408 N ILE A 480 SHEET 5 AB 5 LEU A 515 TYR A 523 -1 N VAL A 516 O THR A 413 SHEET 1 AC 6 VAL A 549 ASN A 551 0 SHEET 2 AC 6 TYR A 668 PHE A 672 -1 O VAL A 669 N LEU A 550 SHEET 3 AC 6 PHE A 575 VAL A 580 -1 O ILE A 576 N PHE A 672 SHEET 4 AC 6 VAL A 590 VAL A 596 -1 N ALA A 591 O LEU A 579 SHEET 5 AC 6 ILE A 606 ARG A 611 -1 O ALA A 607 N ASN A 595 SHEET 6 AC 6 ILE A 620 VAL A 622 -1 O ILE A 620 N CYS A 608 SHEET 1 AD 5 GLN A 651 GLN A 657 0 SHEET 2 AD 5 ASP A 643 VAL A 648 -1 O PHE A 644 N PHE A 656 SHEET 3 AD 5 LEU A 635 THR A 639 -1 O GLN A 636 N LEU A 647 SHEET 4 AD 5 LEU A 561 PRO A 568 -1 O LEU A 562 N ILE A 637 SHEET 5 AD 5 VAL A 675 GLN A 683 -1 N VAL A 676 O THR A 567 SHEET 1 BA 5 VAL B 395 PRO B 397 0 SHEET 2 BA 5 ARG B 508 SER B 512 -1 O ALA B 509 N LEU B 396 SHEET 3 BA 5 PHE B 420 THR B 427 -1 O THR B 422 N SER B 512 SHEET 4 BA 5 SER B 431 ARG B 439 -1 O SER B 431 N THR B 427 SHEET 5 BA 5 HIS B 447 ARG B 453 -1 O HIS B 447 N ARG B 439 SHEET 1 BB 5 PRO B 495 PRO B 500 0 SHEET 2 BB 5 THR B 486 VAL B 491 -1 O TYR B 487 N PHE B 499 SHEET 3 BB 5 LEU B 478 ILE B 482 -1 O VAL B 479 N THR B 490 SHEET 4 BB 5 SER B 407 LEU B 414 -1 O ILE B 408 N ILE B 480 SHEET 5 BB 5 LEU B 515 TYR B 523 -1 N VAL B 516 O THR B 413 SHEET 1 BC 6 VAL B 549 ASN B 551 0 SHEET 2 BC 6 TYR B 668 PHE B 672 -1 O VAL B 669 N LEU B 550 SHEET 3 BC 6 PHE B 575 VAL B 580 -1 O ILE B 576 N PHE B 672 SHEET 4 BC 6 VAL B 590 VAL B 596 -1 N ALA B 591 O LEU B 579 SHEET 5 BC 6 ILE B 606 ARG B 611 -1 O ALA B 607 N ASN B 595 SHEET 6 BC 6 ILE B 620 VAL B 622 -1 O ILE B 620 N CYS B 608 SHEET 1 BD 5 GLN B 651 GLN B 657 0 SHEET 2 BD 5 ASP B 643 VAL B 648 -1 O PHE B 644 N PHE B 656 SHEET 3 BD 5 LEU B 635 THR B 639 -1 O GLN B 636 N LEU B 647 SHEET 4 BD 5 LEU B 561 PRO B 568 -1 O LEU B 562 N ILE B 637 SHEET 5 BD 5 VAL B 675 GLN B 683 -1 N VAL B 676 O THR B 567
LINK C1 GAL A1689 O4 NAG A1690 1555 1555 1.45 LINK C1 NAG A1690 O3 GAL A1691 1555 1555 1.45 LINK C1 GAL A1691 O4 NAG A1692 1555 1555 1.43 LINK C1 NAG A1692 O3 GAL A1693 1555 1555 1.44 LINK C1 GAL A1693 O4 NAG A1694 1555 1555 1.44 LINK C1 GAL B1689 O4 NAG B1690 1555 1555 1.45 LINK C1 NAG B1690 O3 GAL B1691 1555 1555 1.45 LINK C1 GAL B1691 O4 NAG B1692 1555 1555 1.44 LINK C1 NAG B1692 O3 GAL B1693 1555 1555 1.44 LINK C1 GAL B1693 O4 NAG B1694 1555 1555 1.44
SITE 1 AC1 6 PRO A 393 PHE A 394 VAL A 395 THR A 569 SITE 2 AC1 6 PRO A 570 LEU A 571 SITE 1 AC2 8 THR A 415 PRO A 416 SER A 417 ASP A 546 SITE 2 AC2 8 ALA A 547 TYR A 548 VAL A 549 HOH A2059 SITE 1 AC3 5 ASN A 578 VAL A 580 HIS A 584 SER A 587 SITE 2 AC3 5 HIS A 670 SITE 1 AC4 6 PRO B 393 PHE B 394 VAL B 395 THR B 569 SITE 2 AC4 6 PRO B 570 LEU B 571 SITE 1 AC5 8 THR B 415 PRO B 416 SER B 417 ASP B 546 SITE 2 AC5 8 ALA B 547 TYR B 548 VAL B 549 HOH B2031 SITE 1 AC6 5 ASN B 578 VAL B 580 HIS B 584 SER B 587 SITE 2 AC6 5 HIS B 670 SITE 1 AC7 7 LYS B 446 GLU B 471 ALA B 572 GLU B 573 SITE 2 AC7 7 PHE B 598 ARG B 629 NAG B1690 SITE 1 AC8 7 ALA B 430 LEU B 432 ARG B 453 GLU B 573 SITE 2 AC8 7 PHE B 598 GAL B1689 GAL B1691 SITE 1 AC9 6 ARG B 453 PHE B 574 ILE B 576 NAG B1690 SITE 2 AC9 6 NAG B1692 HOH B2068 SITE 1 BC1 10 ASP B 424 LEU B 432 HIS B 435 ARG B 453 SITE 2 BC1 10 TRP B 459 TYR B 585 GAL B1691 GAL B1693 SITE 3 BC1 10 HOH B2007 HOH B2042 SITE 1 BC2 10 HIS B 435 ASN B 437 ARG B 439 VAL B 449 SITE 2 BC2 10 ASN B 451 TRP B 459 GLU B 462 TYR B 585 SITE 3 BC2 10 NAG B1692 NAG B1694 SITE 1 BC3 5 LYS A 650 ARG B 439 GLU B 462 ARG B 464 SITE 2 BC3 5 GAL B1693 SITE 1 BC4 6 LYS A 446 GLU A 471 GLU A 573 PHE A 598 SITE 2 BC4 6 ARG A 629 NAG A1690 SITE 1 BC5 6 ALA A 430 LEU A 432 ARG A 453 GLU A 573 SITE 2 BC5 6 GAL A1689 GAL A1691 SITE 1 BC6 5 ARG A 453 PHE A 574 NAG A1690 NAG A1692 SITE 2 BC6 5 HOH A2005 SITE 1 BC7 8 ASP A 424 LEU A 432 HIS A 435 ARG A 453 SITE 2 BC7 8 TRP A 459 TYR A 585 GAL A1691 GAL A1693 SITE 1 BC8 10 HIS A 435 ASN A 437 ARG A 439 VAL A 449 SITE 2 BC8 10 ASN A 451 TRP A 459 GLU A 462 TYR A 585 SITE 3 BC8 10 NAG A1692 NAG A1694 SITE 1 BC9 5 ARG A 439 GLU A 462 ARG A 464 GAL A1693 SITE 2 BC9 5 HOH A2061
CRYST1 176.130 38.260 86.520 90.00 92.12 90.00 C 1 2 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.005678 0.000000 0.000210 0.00000
SCALE2 0.000000 0.026137 0.000000 0.00000
SCALE3 0.000000 0.000000 0.011566 0.00000
MTRIX1 1 0.999930 -0.009950 0.005670 -1.47280 1
MTRIX2 1 0.009950 0.999950 0.000880 15.02787 1
MTRIX3 1 -0.005680 -0.000820 0.999980 43.11840 1