10 20 30 40 50 60 70 80 2VZK - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 01-AUG-08 2VZK
TITLE STRUCTURE OF THE ACYL-ENZYME COMPLEX OF AN N-TERMINAL NUCLEOPHILE TITLE 2 (NTN) HYDROLASE, OAT2
CAVEAT 2VZK TYR B 391 HAS WRONG CHIRALITY FOR AN L-AMINO ACID TYR F 391 CAVEAT 2 2VZK HAS WRONG CHIRALITY FOR AN L-AMINO ACID
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAMATE N-ACETYLTRANSFERASE 2 ALPHA CHAIN; COMPND 3 CHAIN: A, C, E, G; COMPND 4 FRAGMENT: RESIDUES 8-180; COMPND 5 SYNONYM: ORNITHINE ACETYL TRANSFERASE, OAT2; COMPND 6 EC: 2.3.1.35; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: GLUTAMATE N-ACETYLTRANSFERASE 2 BETA CHAIN; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: ORNITHINE ACETYL TRANSFERASE, OAT2; COMPND 12 EC: 2.3.1.35; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: GLUTAMATE N-ACETYLTRANSFERASE 2 BETA CHAIN; COMPND 16 CHAIN: D, F, H; COMPND 17 SYNONYM: ORNITHINE ACETYL TRANSFERASE, OAT2; COMPND 18 EC: 2.3.1.35; COMPND 19 ENGINEERED: YES; COMPND 20 OTHER_DETAILS: ACETYLISATION OF THR 181 IN CHAINS D, F, AND H
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES CLAVULIGERUS; SOURCE 3 ORGANISM_TAXID: 1901; SOURCE 4 ATCC: 3585; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PTYB12; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: STREPTOMYCES CLAVULIGERUS; SOURCE 11 ORGANISM_TAXID: 1901; SOURCE 12 ATCC: 3585; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PTYB12; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: STREPTOMYCES CLAVULIGERUS; SOURCE 19 ORGANISM_TAXID: 1901; SOURCE 20 ATCC: 3585; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 23 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PTYB12
KEYWDS ACYL ENZYME, TRANSFERASE, NTN HYDROLASE, ACYLTRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR A.IQBAL,I.J.CLIFTON,C.J.SCHOFIELD
REVDAT 4 05-JUL-17 2VZK 1 REMARK REVDAT 3 30-MAR-11 2VZK 1 CAVEAT KEYWDS JRNL REMARK REVDAT 3 2 1 HETNAM FORMUL SITE REVDAT 2 13-JAN-09 2VZK 1 VERSN JRNL REMARK MASTER REVDAT 1 16-SEP-08 2VZK 0
JRNL AUTH A.IQBAL,I.J.CLIFTON,M.BAGONIS,N.J.KERSHAW,C.DOMENE, JRNL AUTH 2 T.D.CLARIDGE,C.W.WHARTON,C.J.SCHOFIELD JRNL TITL ANATOMY OF A SIMPLE ACYL INTERMEDIATE IN ENZYME CATALYSIS: JRNL TITL 2 COMBINED BIOPHYSICAL AND MODELING STUDIES ON ORNITHINE JRNL TITL 3 ACETYL TRANSFERASE. JRNL REF J.AM.CHEM.SOC. V. 131 749 2009 JRNL REFN ISSN 0002-7863 JRNL PMID 19105697 JRNL DOI 10.1021/JA807215U
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.M.ELKINS,N.J.KERSHAW,C.J.SCHOFIELD REMARK 1 TITL X-RAY CRYSTAL STRUCTURE OF ORNITHINE ACETYLTRANSFERASE FROM REMARK 1 TITL 2 THE CLAVULANIC ACID BIOSYNTHESIS GENE CLUSTER. REMARK 1 REF BIOCHEM.J. V. 385 565 2005 REMARK 1 REFN ISSN 0264-6021 REMARK 1 PMID 15352873 REMARK 1 DOI 10.1042/BJ20040814
REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 171.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 58750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.255 REMARK 3 R VALUE (WORKING SET) : 0.254 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3048 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.33 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4521 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3370 REMARK 3 BIN FREE R VALUE SET COUNT : 239 REMARK 3 BIN FREE R VALUE : 0.4060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11211 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 292 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.41000 REMARK 3 B22 (A**2) : -1.00000 REMARK 3 B33 (A**2) : -0.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.98000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.587 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.305 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.238 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.810 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11380 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 7538 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15443 ; 1.713 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 18279 ; 1.331 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1494 ; 8.785 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 506 ;31.576 ;23.478 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1795 ;17.326 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 116 ;23.531 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1809 ; 0.168 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 13022 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2314 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2683 ; 0.243 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 7955 ; 0.221 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5611 ; 0.179 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 6339 ; 0.093 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 465 ; 0.193 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 69 ; 0.243 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 261 ; 0.302 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 37 ; 0.227 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 9491 ; 0.768 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 11904 ; 0.916 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4291 ; 1.811 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3539 ; 2.909 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A C E G REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 8 A 180 1 REMARK 3 1 C 8 C 180 1 REMARK 3 1 E 8 E 180 1 REMARK 3 1 G 8 G 180 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 2141 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 C (A): 2141 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 E (A): 2141 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 G (A): 2141 ; 0.05 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 2141 ; 0.14 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 2141 ; 0.14 ; 0.50 REMARK 3 TIGHT THERMAL 1 E (A**2): 2141 ; 0.13 ; 0.50 REMARK 3 TIGHT THERMAL 1 G (A**2): 2141 ; 0.13 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : B D F H REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 181 B 336 1 REMARK 3 1 D 181 D 336 1 REMARK 3 1 F 181 F 336 1 REMARK 3 1 H 181 H 336 1 REMARK 3 2 B 344 B 390 1 REMARK 3 2 D 344 D 390 1 REMARK 3 2 F 344 F 390 1 REMARK 3 2 H 344 H 390 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 B (A): 2421 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 D (A): 2421 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 F (A): 2421 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 H (A): 2421 ; 0.05 ; 0.05 REMARK 3 TIGHT THERMAL 2 B (A**2): 2421 ; 0.14 ; 0.50 REMARK 3 TIGHT THERMAL 2 D (A**2): 2421 ; 0.15 ; 0.50 REMARK 3 TIGHT THERMAL 2 F (A**2): 2421 ; 0.14 ; 0.50 REMARK 3 TIGHT THERMAL 2 H (A**2): 2421 ; 0.13 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 8 A 130 REMARK 3 ORIGIN FOR THE GROUP (A): 19.0162 3.7028 -65.1719 REMARK 3 T TENSOR REMARK 3 T11: 0.0456 T22: 0.0887 REMARK 3 T33: 0.1088 T12: 0.0084 REMARK 3 T13: -0.0057 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 0.4542 L22: 1.1536 REMARK 3 L33: 1.4202 L12: 0.0948 REMARK 3 L13: 0.1572 L23: -0.1957 REMARK 3 S TENSOR REMARK 3 S11: 0.0015 S12: -0.0450 S13: -0.0533 REMARK 3 S21: 0.0991 S22: -0.0130 S23: -0.0802 REMARK 3 S31: 0.0664 S32: 0.0802 S33: 0.0115 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 131 A 180 REMARK 3 ORIGIN FOR THE GROUP (A): 5.2055 8.9767 -63.8503 REMARK 3 T TENSOR REMARK 3 T11: 0.0623 T22: 0.1398 REMARK 3 T33: 0.0867 T12: 0.0154 REMARK 3 T13: -0.0096 T23: -0.0239 REMARK 3 L TENSOR REMARK 3 L11: 0.4846 L22: 1.0837 REMARK 3 L33: 1.4260 L12: -0.0133 REMARK 3 L13: -0.4212 L23: -0.2843 REMARK 3 S TENSOR REMARK 3 S11: 0.0244 S12: -0.2214 S13: 0.0906 REMARK 3 S21: 0.1715 S22: 0.0253 S23: 0.0435 REMARK 3 S31: -0.0329 S32: -0.0948 S33: -0.0497 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 181 B 284 REMARK 3 ORIGIN FOR THE GROUP (A): -1.8682 -0.8971 -69.5923 REMARK 3 T TENSOR REMARK 3 T11: 0.0763 T22: 0.1306 REMARK 3 T33: 0.0970 T12: -0.0013 REMARK 3 T13: 0.0010 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.2759 L22: 0.5116 REMARK 3 L33: 0.7427 L12: 0.0661 REMARK 3 L13: 0.2828 L23: 0.0108 REMARK 3 S TENSOR REMARK 3 S11: 0.0488 S12: -0.1085 S13: -0.0926 REMARK 3 S21: 0.0832 S22: -0.0020 S23: 0.0236 REMARK 3 S31: 0.1018 S32: -0.0671 S33: -0.0468 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 285 B 393 REMARK 3 ORIGIN FOR THE GROUP (A): -12.1339 6.0437 -89.5970 REMARK 3 T TENSOR REMARK 3 T11: 0.0442 T22: 0.1074 REMARK 3 T33: 0.1130 T12: 0.0131 REMARK 3 T13: 0.0043 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 1.7707 L22: 0.0809 REMARK 3 L33: 0.5137 L12: 0.1569 REMARK 3 L13: 0.0020 L23: -0.1854 REMARK 3 S TENSOR REMARK 3 S11: -0.0003 S12: -0.0302 S13: 0.1226 REMARK 3 S21: -0.0521 S22: -0.0176 S23: 0.0386 REMARK 3 S31: -0.0634 S32: -0.1162 S33: 0.0178 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 8 C 130 REMARK 3 ORIGIN FOR THE GROUP (A): 23.1708 37.3732 -55.6437 REMARK 3 T TENSOR REMARK 3 T11: 0.0722 T22: 0.1019 REMARK 3 T33: 0.0988 T12: -0.0126 REMARK 3 T13: -0.0119 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.3747 L22: 0.9949 REMARK 3 L33: 1.6967 L12: -0.1097 REMARK 3 L13: -0.0501 L23: -0.2204 REMARK 3 S TENSOR REMARK 3 S11: -0.0207 S12: -0.0657 S13: 0.0072 REMARK 3 S21: 0.1327 S22: -0.0439 S23: -0.0938 REMARK 3 S31: -0.0584 S32: 0.1318 S33: 0.0647 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 131 C 180 REMARK 3 ORIGIN FOR THE GROUP (A): 9.5961 42.5922 -53.5583 REMARK 3 T TENSOR REMARK 3 T11: 0.0936 T22: 0.0934 REMARK 3 T33: 0.0886 T12: 0.0055 REMARK 3 T13: -0.0138 T23: -0.0256 REMARK 3 L TENSOR REMARK 3 L11: 0.6813 L22: 0.3037 REMARK 3 L33: 2.8568 L12: 0.3065 REMARK 3 L13: -0.3350 L23: 0.5175 REMARK 3 S TENSOR REMARK 3 S11: 0.0497 S12: -0.1789 S13: 0.1263 REMARK 3 S21: 0.1164 S22: -0.0283 S23: 0.0798 REMARK 3 S31: 0.0013 S32: -0.0637 S33: -0.0215 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 182 D 282 REMARK 3 ORIGIN FOR THE GROUP (A): 2.1591 33.4356 -60.1581 REMARK 3 T TENSOR REMARK 3 T11: 0.0616 T22: 0.0998 REMARK 3 T33: 0.1036 T12: 0.0045 REMARK 3 T13: 0.0157 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.9482 L22: 0.5553 REMARK 3 L33: 1.6990 L12: -0.1108 REMARK 3 L13: 0.8364 L23: -0.0756 REMARK 3 S TENSOR REMARK 3 S11: 0.0252 S12: -0.1296 S13: 0.0061 REMARK 3 S21: 0.0741 S22: 0.0433 S23: 0.0578 REMARK 3 S31: 0.0986 S32: -0.1694 S33: -0.0685 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 283 D 390 REMARK 3 ORIGIN FOR THE GROUP (A): -8.9217 42.2359 -79.6571 REMARK 3 T TENSOR REMARK 3 T11: 0.0630 T22: 0.0978 REMARK 3 T33: 0.1069 T12: -0.0009 REMARK 3 T13: 0.0084 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 1.7219 L22: 0.7912 REMARK 3 L33: 0.8711 L12: -0.2496 REMARK 3 L13: 0.0840 L23: -0.4145 REMARK 3 S TENSOR REMARK 3 S11: 0.0334 S12: 0.0200 S13: 0.0724 REMARK 3 S21: 0.0634 S22: 0.0280 S23: 0.0257 REMARK 3 S31: -0.0177 S32: -0.1205 S33: -0.0614 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 8 E 127 REMARK 3 ORIGIN FOR THE GROUP (A): 29.7264 27.2282 -25.5777 REMARK 3 T TENSOR REMARK 3 T11: 0.1383 T22: 0.0792 REMARK 3 T33: 0.0985 T12: 0.0122 REMARK 3 T13: -0.0231 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.9381 L22: 0.4144 REMARK 3 L33: 1.4867 L12: -0.1706 REMARK 3 L13: 0.3112 L23: -0.3520 REMARK 3 S TENSOR REMARK 3 S11: 0.0244 S12: 0.1102 S13: 0.0430 REMARK 3 S21: -0.0637 S22: -0.0101 S23: -0.0942 REMARK 3 S31: 0.0166 S32: 0.1075 S33: -0.0143 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 128 E 180 REMARK 3 ORIGIN FOR THE GROUP (A): 18.8056 21.9960 -19.6283 REMARK 3 T TENSOR REMARK 3 T11: 0.1580 T22: 0.1052 REMARK 3 T33: 0.0951 T12: -0.0154 REMARK 3 T13: -0.0270 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.4216 L22: 0.4891 REMARK 3 L33: 0.4672 L12: 0.0577 REMARK 3 L13: 0.3678 L23: -0.0661 REMARK 3 S TENSOR REMARK 3 S11: 0.0989 S12: 0.0246 S13: -0.0338 REMARK 3 S21: -0.0678 S22: -0.0763 S23: 0.1993 REMARK 3 S31: 0.1624 S32: -0.2370 S33: -0.0226 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 182 F 283 REMARK 3 ORIGIN FOR THE GROUP (A): 16.1589 32.1179 -9.5238 REMARK 3 T TENSOR REMARK 3 T11: 0.1486 T22: 0.0922 REMARK 3 T33: 0.1037 T12: -0.0089 REMARK 3 T13: -0.0194 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.5525 L22: 0.0844 REMARK 3 L33: 1.7502 L12: 0.2093 REMARK 3 L13: 0.3184 L23: 0.2103 REMARK 3 S TENSOR REMARK 3 S11: 0.0091 S12: 0.0085 S13: 0.0508 REMARK 3 S21: -0.0366 S22: -0.0464 S23: 0.0740 REMARK 3 S31: -0.0575 S32: -0.2271 S33: 0.0373 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 284 F 392 REMARK 3 ORIGIN FOR THE GROUP (A): 21.0525 25.1631 10.6140 REMARK 3 T TENSOR REMARK 3 T11: 0.1702 T22: 0.0821 REMARK 3 T33: 0.1556 T12: -0.0346 REMARK 3 T13: -0.0037 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 0.8920 L22: 0.9541 REMARK 3 L33: 1.4861 L12: -0.4202 REMARK 3 L13: -0.3523 L23: 0.4558 REMARK 3 S TENSOR REMARK 3 S11: -0.0261 S12: -0.0300 S13: -0.0760 REMARK 3 S21: 0.1174 S22: -0.0202 S23: 0.1200 REMARK 3 S31: 0.2357 S32: -0.2160 S33: 0.0463 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 8 G 125 REMARK 3 ORIGIN FOR THE GROUP (A): 25.6608 -7.2137 -34.9708 REMARK 3 T TENSOR REMARK 3 T11: 0.1898 T22: 0.0885 REMARK 3 T33: 0.0894 T12: 0.0091 REMARK 3 T13: -0.0285 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 1.3048 L22: 1.1848 REMARK 3 L33: 1.4255 L12: 0.1566 REMARK 3 L13: 0.6601 L23: -0.0061 REMARK 3 S TENSOR REMARK 3 S11: 0.0307 S12: 0.1354 S13: -0.0550 REMARK 3 S21: -0.1432 S22: 0.0210 S23: -0.0965 REMARK 3 S31: 0.0635 S32: 0.1127 S33: -0.0517 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 126 G 180 REMARK 3 ORIGIN FOR THE GROUP (A): 15.0879 -12.6279 -29.9882 REMARK 3 T TENSOR REMARK 3 T11: 0.2250 T22: 0.0576 REMARK 3 T33: 0.1202 T12: -0.0293 REMARK 3 T13: -0.0515 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 0.9204 L22: 0.2190 REMARK 3 L33: 1.1591 L12: 0.1102 REMARK 3 L13: 0.7180 L23: -0.2652 REMARK 3 S TENSOR REMARK 3 S11: -0.0328 S12: -0.0402 S13: -0.0916 REMARK 3 S21: -0.1470 S22: -0.0048 S23: -0.0112 REMARK 3 S31: 0.1665 S32: -0.2071 S33: 0.0377 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 182 H 283 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6459 -3.0196 -18.5571 REMARK 3 T TENSOR REMARK 3 T11: 0.1461 T22: 0.0937 REMARK 3 T33: 0.1139 T12: -0.0084 REMARK 3 T13: -0.0215 T23: 0.0302 REMARK 3 L TENSOR REMARK 3 L11: 0.6034 L22: 0.1111 REMARK 3 L33: 2.0744 L12: 0.2062 REMARK 3 L13: 0.4635 L23: 0.4227 REMARK 3 S TENSOR REMARK 3 S11: 0.0095 S12: -0.0038 S13: 0.0371 REMARK 3 S21: -0.0128 S22: -0.0028 S23: 0.0571 REMARK 3 S31: -0.0964 S32: -0.2474 S33: -0.0067 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 284 H 390 REMARK 3 ORIGIN FOR THE GROUP (A): 16.9312 -11.2499 1.4710 REMARK 3 T TENSOR REMARK 3 T11: 0.1505 T22: 0.1274 REMARK 3 T33: 0.1413 T12: -0.0247 REMARK 3 T13: -0.0178 T23: 0.0244 REMARK 3 L TENSOR REMARK 3 L11: 1.0849 L22: 2.2728 REMARK 3 L33: 1.3775 L12: -0.5182 REMARK 3 L13: -0.1033 L23: 0.3083 REMARK 3 S TENSOR REMARK 3 S11: 0.0090 S12: -0.1437 S13: -0.1581 REMARK 3 S21: 0.0921 S22: 0.0514 S23: 0.3054 REMARK 3 S31: 0.2215 S32: -0.2435 S33: -0.0604 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ANISOTROPIC U FACTORS CALCULATED FROM TLS MODEL BY REMARK 3 TLSANL
REMARK 4 REMARK 4 2VZK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-AUG-08. REMARK 100 THE DEPOSITION ID IS D_1290036647.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JAN-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MONTEL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62183 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330 REMARK 200 RESOLUTION RANGE LOW (A) : 37.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.70000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.030 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1VZ6, CHAIN A REMARK 200 REMARK 200 REMARK: NONE
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4M AMMONIUM SULPHATE, 100MM N-ACETYL REMARK 280 -L-GLUTAMATE, 200MM NACL, 100MM TRIS HCL PH 7.5
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.93900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR D 391 REMARK 465 THR D 392 REMARK 465 THR D 393 REMARK 465 LYS F 337 REMARK 465 ALA F 338 REMARK 465 ARG F 339 REMARK 465 GLY F 340 REMARK 465 ASP F 341 REMARK 465 GLN F 342 REMARK 465 ALA F 343 REMARK 465 ASP F 344 REMARK 465 ASP F 345 REMARK 465 ALA F 346 REMARK 465 LEU F 347 REMARK 465 ARG F 348 REMARK 465 ALA F 349 REMARK 465 ALA F 350 REMARK 465 VAL F 351 REMARK 465 THR F 393 REMARK 465 LYS H 337 REMARK 465 ALA H 338 REMARK 465 ARG H 339 REMARK 465 GLY H 340 REMARK 465 ASP H 341 REMARK 465 GLN H 342 REMARK 465 ALA H 343 REMARK 465 ASP H 344 REMARK 465 ASP H 345 REMARK 465 ALA H 346 REMARK 465 LEU H 347 REMARK 465 ARG H 348 REMARK 465 ALA H 349 REMARK 465 ALA H 350 REMARK 465 VAL H 351 REMARK 465 TYR H 391 REMARK 465 THR H 392 REMARK 465 THR H 393
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG1 VAL E 40 O HOH E 2007 1.96 REMARK 500 O CYS H 299 O HOH H 2020 1.97 REMARK 500 OG SER D 314 O HOH D 2029 2.03 REMARK 500 O ALA G 60 O HOH G 2009 2.07 REMARK 500 OE1 GLU E 121 O HOH E 2021 2.11 REMARK 500 O GLY G 104 O HOH G 2009 2.13 REMARK 500 O GLY F 377 O HOH F 2035 2.13 REMARK 500 CB ARG B 339 NE2 GLN B 342 2.13 REMARK 500 CA LEU F 265 O HOH F 2035 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 46 O HOH D 2029 2544 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LEU D 182 N LEU D 182 CA 0.136 REMARK 500 ARG D 339 C ARG D 339 O 0.117 REMARK 500 LEU F 182 N LEU F 182 CA 0.208 REMARK 500 LEU H 182 N LEU H 182 CA 0.287 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 107 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 ARG A 152 CD - NE - CZ ANGL. DEV. = 15.2 DEGREES REMARK 500 ARG A 152 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG A 152 NE - CZ - NH2 ANGL. DEV. = -9.9 DEGREES REMARK 500 LEU B 200 CA - CB - CG ANGL. DEV. = 15.8 DEGREES REMARK 500 ARG B 274 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ALA B 343 N - CA - CB ANGL. DEV. = 11.7 DEGREES REMARK 500 ARG B 348 N - CA - CB ANGL. DEV. = 12.5 DEGREES REMARK 500 GLU B 390 CA - C - N ANGL. DEV. = 13.4 DEGREES REMARK 500 ARG C 10 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG C 152 CD - NE - CZ ANGL. DEV. = 14.6 DEGREES REMARK 500 ARG C 152 NE - CZ - NH1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG C 152 NE - CZ - NH2 ANGL. DEV. = -9.6 DEGREES REMARK 500 ARG D 281 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG E 152 CD - NE - CZ ANGL. DEV. = 15.2 DEGREES REMARK 500 ARG E 152 NE - CZ - NH1 ANGL. DEV. = -10.7 DEGREES REMARK 500 ARG E 152 NE - CZ - NH2 ANGL. DEV. = 8.4 DEGREES REMARK 500 LEU F 182 C - N - CA ANGL. DEV. = 17.2 DEGREES REMARK 500 LEU F 182 N - CA - CB ANGL. DEV. = 13.9 DEGREES REMARK 500 LEU F 200 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 GLU F 390 CA - C - N ANGL. DEV. = 15.6 DEGREES REMARK 500 ARG G 48 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG G 152 CD - NE - CZ ANGL. DEV. = 15.2 DEGREES REMARK 500 ARG G 152 NE - CZ - NH1 ANGL. DEV. = -11.3 DEGREES REMARK 500 ARG G 152 NE - CZ - NH2 ANGL. DEV. = 8.5 DEGREES REMARK 500 LEU H 182 C - N - CA ANGL. DEV. = 15.2 DEGREES REMARK 500 LEU H 182 N - CA - CB ANGL. DEV. = 12.3 DEGREES REMARK 500 LEU H 200 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 ARG H 281 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG H 281 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 148 -92.58 -126.28 REMARK 500 THR B 208 -81.27 -129.67 REMARK 500 ASP B 215 18.98 -141.58 REMARK 500 THR B 216 -1.03 62.24 REMARK 500 ALA B 338 -138.55 84.31 REMARK 500 ARG B 339 -156.83 -64.59 REMARK 500 GLN B 342 -143.77 54.44 REMARK 500 ALA B 343 -83.74 88.58 REMARK 500 LEU B 347 -55.58 84.10 REMARK 500 ALA B 369 -125.12 -152.54 REMARK 500 TYR B 391 67.50 128.80 REMARK 500 ASP C 24 11.16 -144.25 REMARK 500 THR C 148 -89.15 -121.71 REMARK 500 THR D 208 -88.39 -128.73 REMARK 500 ASP D 215 21.92 -142.19 REMARK 500 THR D 216 2.00 58.33 REMARK 500 SER D 221 -5.20 -140.12 REMARK 500 ALA D 338 -120.17 -141.99 REMARK 500 ARG D 339 -171.10 -47.61 REMARK 500 GLN D 342 -62.14 34.36 REMARK 500 ALA D 343 40.10 119.72 REMARK 500 ASP D 345 -77.46 -35.29 REMARK 500 LEU D 347 -64.32 116.84 REMARK 500 ALA D 369 -130.02 -157.91 REMARK 500 THR E 148 -89.10 -121.82 REMARK 500 LEU F 182 98.41 -26.98 REMARK 500 THR F 208 -84.27 -132.01 REMARK 500 ASP F 215 20.95 -148.03 REMARK 500 THR F 216 -3.09 62.44 REMARK 500 ILE F 368 -62.16 -103.71 REMARK 500 ALA F 369 -130.26 -151.76 REMARK 500 TYR F 391 48.82 113.97 REMARK 500 ASP G 23 67.88 -101.06 REMARK 500 THR G 148 -93.72 -123.06 REMARK 500 THR H 208 -83.59 -129.05 REMARK 500 ASP H 215 23.23 -140.77 REMARK 500 THR H 216 1.20 58.08 REMARK 500 SER H 221 -2.81 -143.72 REMARK 500 ALA H 369 -126.80 -155.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG B 339 GLY B 340 51.51 REMARK 500 ASP B 341 GLN B 342 148.62 REMARK 500 GLN B 342 ALA B 343 36.63 REMARK 500 LEU B 347 ARG B 348 145.11 REMARK 500 ARG D 339 GLY D 340 53.77 REMARK 500 GLN D 342 ALA D 343 -130.63 REMARK 500 ALA D 343 ASP D 344 71.77 REMARK 500 THR E 45 ARG E 46 147.80 REMARK 500 TH5 F 181 LEU F 182 124.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 152 0.10 SIDE CHAIN REMARK 500 ARG C 152 0.09 SIDE CHAIN REMARK 500 ARG E 152 0.08 SIDE CHAIN REMARK 500 ARG G 152 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT E 1181 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT G 1181 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 1181 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 1182
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1VZ8 RELATED DB: PDB REMARK 900 ORNITHINE ACETYLTRANSFERASE (ORF6 GENE PRODUCT - CLAVULANIC ACID REMARK 900 BIOSYNTHESIS) FROM STREPTOMYCES CLAVULIGERUS (SEMET STRUCTURE) REMARK 900 RELATED ID: 1VZ6 RELATED DB: PDB REMARK 900 ORNITHINE ACETYLTRANSFERASE (ORF6 GENE PRODUCT - CLAVULANIC ACID REMARK 900 BIOSYNTHESIS) FROM STREPTOMYCES CLAVULIGERUS REMARK 900 RELATED ID: 1VZ7 RELATED DB: PDB REMARK 900 ORNITHINE ACETYLTRANSFERASE (ORF6 GENE PRODUCT - CLAVULANIC ACID REMARK 900 BIOSYNTHESIS) FROM STREPTOMYCES CLAVULIGERUS
DBREF 2VZK A 8 180 UNP Q53940 GNAT2_STRCL 8 180 DBREF 2VZK B 181 393 UNP Q53940 GNAT2_STRCL 181 393 DBREF 2VZK C 8 180 UNP Q53940 GNAT2_STRCL 8 180 DBREF 2VZK D 181 393 UNP Q53940 GNAT2_STRCL 181 393 DBREF 2VZK E 8 180 UNP Q53940 GNAT2_STRCL 8 180 DBREF 2VZK F 181 393 UNP Q53940 GNAT2_STRCL 181 393 DBREF 2VZK G 8 180 UNP Q53940 GNAT2_STRCL 8 180 DBREF 2VZK H 181 393 UNP Q53940 GNAT2_STRCL 181 393
SEQRES 1 A 173 THR PRO ARG GLY PHE VAL VAL HIS THR ALA PRO VAL GLY SEQRES 2 A 173 LEU ALA ASP ASP GLY ARG ASP ASP PHE THR VAL LEU ALA SEQRES 3 A 173 SER THR ALA PRO ALA THR VAL SER ALA VAL PHE THR ARG SEQRES 4 A 173 SER ARG PHE ALA GLY PRO SER VAL VAL LEU CYS ARG GLU SEQRES 5 A 173 ALA VAL ALA ASP GLY GLN ALA ARG GLY VAL VAL VAL LEU SEQRES 6 A 173 ALA ARG ASN ALA ASN VAL ALA THR GLY LEU GLU GLY GLU SEQRES 7 A 173 GLU ASN ALA ARG GLU VAL ARG GLU ALA VAL ALA ARG ALA SEQRES 8 A 173 LEU GLY LEU PRO GLU GLY GLU MET LEU ILE ALA SER THR SEQRES 9 A 173 GLY VAL ILE GLY ARG GLN TYR PRO MET GLU SER ILE ARG SEQRES 10 A 173 GLU HIS LEU LYS THR LEU GLU TRP PRO ALA GLY GLU GLY SEQRES 11 A 173 GLY PHE ASP ARG ALA ALA ARG ALA ILE MET THR THR ASP SEQRES 12 A 173 THR ARG PRO LYS GLU VAL ARG VAL SER VAL GLY GLY ALA SEQRES 13 A 173 THR LEU VAL GLY ILE ALA LYS GLY VAL GLY MET LEU GLU SEQRES 14 A 173 PRO ASP MET ALA SEQRES 1 B 213 THR LEU LEU THR PHE PHE ALA THR ASP ALA ARG LEU ASP SEQRES 2 B 213 PRO ALA GLU GLN ASP ARG LEU PHE ARG ARG VAL MET ASP SEQRES 3 B 213 ARG THR PHE ASN ALA VAL SER ILE ASP THR ASP THR SER SEQRES 4 B 213 THR SER ASP THR ALA VAL LEU PHE ALA ASN GLY LEU ALA SEQRES 5 B 213 GLY GLU VAL ASP ALA GLY GLU PHE GLU GLU ALA LEU HIS SEQRES 6 B 213 THR ALA ALA LEU ALA LEU VAL LYS ASP ILE ALA SER ASP SEQRES 7 B 213 GLY GLU GLY ALA ALA LYS LEU ILE GLU VAL GLN VAL THR SEQRES 8 B 213 GLY ALA ARG ASP ASP ALA GLN ALA LYS ARG VAL GLY LYS SEQRES 9 B 213 THR VAL VAL ASN SER PRO LEU VAL LYS THR ALA VAL HIS SEQRES 10 B 213 GLY CYS ASP PRO ASN TRP GLY ARG VAL ALA MET ALA ILE SEQRES 11 B 213 GLY LYS CYS SER ASP ASP THR ASP ILE ASP GLN GLU ARG SEQRES 12 B 213 VAL THR ILE ARG PHE GLY GLU VAL GLU VAL TYR PRO PRO SEQRES 13 B 213 LYS ALA ARG GLY ASP GLN ALA ASP ASP ALA LEU ARG ALA SEQRES 14 B 213 ALA VAL ALA GLU HIS LEU ARG GLY ASP GLU VAL VAL ILE SEQRES 15 B 213 GLY ILE ASP LEU ALA ILE ALA ASP GLY ALA PHE THR VAL SEQRES 16 B 213 TYR GLY CYS ASP LEU THR GLU GLY TYR VAL ARG LEU ASN SEQRES 17 B 213 SER GLU TYR THR THR SEQRES 1 C 173 THR PRO ARG GLY PHE VAL VAL HIS THR ALA PRO VAL GLY SEQRES 2 C 173 LEU ALA ASP ASP GLY ARG ASP ASP PHE THR VAL LEU ALA SEQRES 3 C 173 SER THR ALA PRO ALA THR VAL SER ALA VAL PHE THR ARG SEQRES 4 C 173 SER ARG PHE ALA GLY PRO SER VAL VAL LEU CYS ARG GLU SEQRES 5 C 173 ALA VAL ALA ASP GLY GLN ALA ARG GLY VAL VAL VAL LEU SEQRES 6 C 173 ALA ARG ASN ALA ASN VAL ALA THR GLY LEU GLU GLY GLU SEQRES 7 C 173 GLU ASN ALA ARG GLU VAL ARG GLU ALA VAL ALA ARG ALA SEQRES 8 C 173 LEU GLY LEU PRO GLU GLY GLU MET LEU ILE ALA SER THR SEQRES 9 C 173 GLY VAL ILE GLY ARG GLN TYR PRO MET GLU SER ILE ARG SEQRES 10 C 173 GLU HIS LEU LYS THR LEU GLU TRP PRO ALA GLY GLU GLY SEQRES 11 C 173 GLY PHE ASP ARG ALA ALA ARG ALA ILE MET THR THR ASP SEQRES 12 C 173 THR ARG PRO LYS GLU VAL ARG VAL SER VAL GLY GLY ALA SEQRES 13 C 173 THR LEU VAL GLY ILE ALA LYS GLY VAL GLY MET LEU GLU SEQRES 14 C 173 PRO ASP MET ALA SEQRES 1 D 213 TH5 LEU LEU THR PHE PHE ALA THR ASP ALA ARG LEU ASP SEQRES 2 D 213 PRO ALA GLU GLN ASP ARG LEU PHE ARG ARG VAL MET ASP SEQRES 3 D 213 ARG THR PHE ASN ALA VAL SER ILE ASP THR ASP THR SER SEQRES 4 D 213 THR SER ASP THR ALA VAL LEU PHE ALA ASN GLY LEU ALA SEQRES 5 D 213 GLY GLU VAL ASP ALA GLY GLU PHE GLU GLU ALA LEU HIS SEQRES 6 D 213 THR ALA ALA LEU ALA LEU VAL LYS ASP ILE ALA SER ASP SEQRES 7 D 213 GLY GLU GLY ALA ALA LYS LEU ILE GLU VAL GLN VAL THR SEQRES 8 D 213 GLY ALA ARG ASP ASP ALA GLN ALA LYS ARG VAL GLY LYS SEQRES 9 D 213 THR VAL VAL ASN SER PRO LEU VAL LYS THR ALA VAL HIS SEQRES 10 D 213 GLY CYS ASP PRO ASN TRP GLY ARG VAL ALA MET ALA ILE SEQRES 11 D 213 GLY LYS CYS SER ASP ASP THR ASP ILE ASP GLN GLU ARG SEQRES 12 D 213 VAL THR ILE ARG PHE GLY GLU VAL GLU VAL TYR PRO PRO SEQRES 13 D 213 LYS ALA ARG GLY ASP GLN ALA ASP ASP ALA LEU ARG ALA SEQRES 14 D 213 ALA VAL ALA GLU HIS LEU ARG GLY ASP GLU VAL VAL ILE SEQRES 15 D 213 GLY ILE ASP LEU ALA ILE ALA ASP GLY ALA PHE THR VAL SEQRES 16 D 213 TYR GLY CYS ASP LEU THR GLU GLY TYR VAL ARG LEU ASN SEQRES 17 D 213 SER GLU TYR THR THR SEQRES 1 E 173 THR PRO ARG GLY PHE VAL VAL HIS THR ALA PRO VAL GLY SEQRES 2 E 173 LEU ALA ASP ASP GLY ARG ASP ASP PHE THR VAL LEU ALA SEQRES 3 E 173 SER THR ALA PRO ALA THR VAL SER ALA VAL PHE THR ARG SEQRES 4 E 173 SER ARG PHE ALA GLY PRO SER VAL VAL LEU CYS ARG GLU SEQRES 5 E 173 ALA VAL ALA ASP GLY GLN ALA ARG GLY VAL VAL VAL LEU SEQRES 6 E 173 ALA ARG ASN ALA ASN VAL ALA THR GLY LEU GLU GLY GLU SEQRES 7 E 173 GLU ASN ALA ARG GLU VAL ARG GLU ALA VAL ALA ARG ALA SEQRES 8 E 173 LEU GLY LEU PRO GLU GLY GLU MET LEU ILE ALA SER THR SEQRES 9 E 173 GLY VAL ILE GLY ARG GLN TYR PRO MET GLU SER ILE ARG SEQRES 10 E 173 GLU HIS LEU LYS THR LEU GLU TRP PRO ALA GLY GLU GLY SEQRES 11 E 173 GLY PHE ASP ARG ALA ALA ARG ALA ILE MET THR THR ASP SEQRES 12 E 173 THR ARG PRO LYS GLU VAL ARG VAL SER VAL GLY GLY ALA SEQRES 13 E 173 THR LEU VAL GLY ILE ALA LYS GLY VAL GLY MET LEU GLU SEQRES 14 E 173 PRO ASP MET ALA SEQRES 1 F 213 TH5 LEU LEU THR PHE PHE ALA THR ASP ALA ARG LEU ASP SEQRES 2 F 213 PRO ALA GLU GLN ASP ARG LEU PHE ARG ARG VAL MET ASP SEQRES 3 F 213 ARG THR PHE ASN ALA VAL SER ILE ASP THR ASP THR SER SEQRES 4 F 213 THR SER ASP THR ALA VAL LEU PHE ALA ASN GLY LEU ALA SEQRES 5 F 213 GLY GLU VAL ASP ALA GLY GLU PHE GLU GLU ALA LEU HIS SEQRES 6 F 213 THR ALA ALA LEU ALA LEU VAL LYS ASP ILE ALA SER ASP SEQRES 7 F 213 GLY GLU GLY ALA ALA LYS LEU ILE GLU VAL GLN VAL THR SEQRES 8 F 213 GLY ALA ARG ASP ASP ALA GLN ALA LYS ARG VAL GLY LYS SEQRES 9 F 213 THR VAL VAL ASN SER PRO LEU VAL LYS THR ALA VAL HIS SEQRES 10 F 213 GLY CYS ASP PRO ASN TRP GLY ARG VAL ALA MET ALA ILE SEQRES 11 F 213 GLY LYS CYS SER ASP ASP THR ASP ILE ASP GLN GLU ARG SEQRES 12 F 213 VAL THR ILE ARG PHE GLY GLU VAL GLU VAL TYR PRO PRO SEQRES 13 F 213 LYS ALA ARG GLY ASP GLN ALA ASP ASP ALA LEU ARG ALA SEQRES 14 F 213 ALA VAL ALA GLU HIS LEU ARG GLY ASP GLU VAL VAL ILE SEQRES 15 F 213 GLY ILE ASP LEU ALA ILE ALA ASP GLY ALA PHE THR VAL SEQRES 16 F 213 TYR GLY CYS ASP LEU THR GLU GLY TYR VAL ARG LEU ASN SEQRES 17 F 213 SER GLU TYR THR THR SEQRES 1 G 173 THR PRO ARG GLY PHE VAL VAL HIS THR ALA PRO VAL GLY SEQRES 2 G 173 LEU ALA ASP ASP GLY ARG ASP ASP PHE THR VAL LEU ALA SEQRES 3 G 173 SER THR ALA PRO ALA THR VAL SER ALA VAL PHE THR ARG SEQRES 4 G 173 SER ARG PHE ALA GLY PRO SER VAL VAL LEU CYS ARG GLU SEQRES 5 G 173 ALA VAL ALA ASP GLY GLN ALA ARG GLY VAL VAL VAL LEU SEQRES 6 G 173 ALA ARG ASN ALA ASN VAL ALA THR GLY LEU GLU GLY GLU SEQRES 7 G 173 GLU ASN ALA ARG GLU VAL ARG GLU ALA VAL ALA ARG ALA SEQRES 8 G 173 LEU GLY LEU PRO GLU GLY GLU MET LEU ILE ALA SER THR SEQRES 9 G 173 GLY VAL ILE GLY ARG GLN TYR PRO MET GLU SER ILE ARG SEQRES 10 G 173 GLU HIS LEU LYS THR LEU GLU TRP PRO ALA GLY GLU GLY SEQRES 11 G 173 GLY PHE ASP ARG ALA ALA ARG ALA ILE MET THR THR ASP SEQRES 12 G 173 THR ARG PRO LYS GLU VAL ARG VAL SER VAL GLY GLY ALA SEQRES 13 G 173 THR LEU VAL GLY ILE ALA LYS GLY VAL GLY MET LEU GLU SEQRES 14 G 173 PRO ASP MET ALA SEQRES 1 H 213 TH5 LEU LEU THR PHE PHE ALA THR ASP ALA ARG LEU ASP SEQRES 2 H 213 PRO ALA GLU GLN ASP ARG LEU PHE ARG ARG VAL MET ASP SEQRES 3 H 213 ARG THR PHE ASN ALA VAL SER ILE ASP THR ASP THR SER SEQRES 4 H 213 THR SER ASP THR ALA VAL LEU PHE ALA ASN GLY LEU ALA SEQRES 5 H 213 GLY GLU VAL ASP ALA GLY GLU PHE GLU GLU ALA LEU HIS SEQRES 6 H 213 THR ALA ALA LEU ALA LEU VAL LYS ASP ILE ALA SER ASP SEQRES 7 H 213 GLY GLU GLY ALA ALA LYS LEU ILE GLU VAL GLN VAL THR SEQRES 8 H 213 GLY ALA ARG ASP ASP ALA GLN ALA LYS ARG VAL GLY LYS SEQRES 9 H 213 THR VAL VAL ASN SER PRO LEU VAL LYS THR ALA VAL HIS SEQRES 10 H 213 GLY CYS ASP PRO ASN TRP GLY ARG VAL ALA MET ALA ILE SEQRES 11 H 213 GLY LYS CYS SER ASP ASP THR ASP ILE ASP GLN GLU ARG SEQRES 12 H 213 VAL THR ILE ARG PHE GLY GLU VAL GLU VAL TYR PRO PRO SEQRES 13 H 213 LYS ALA ARG GLY ASP GLN ALA ASP ASP ALA LEU ARG ALA SEQRES 14 H 213 ALA VAL ALA GLU HIS LEU ARG GLY ASP GLU VAL VAL ILE SEQRES 15 H 213 GLY ILE ASP LEU ALA ILE ALA ASP GLY ALA PHE THR VAL SEQRES 16 H 213 TYR GLY CYS ASP LEU THR GLU GLY TYR VAL ARG LEU ASN SEQRES 17 H 213 SER GLU TYR THR THR
MODRES 2VZK TH5 D 181 THR O-ACETYL-L-THREONINE MODRES 2VZK TH5 F 181 THR O-ACETYL-L-THREONINE MODRES 2VZK TH5 H 181 THR O-ACETYL-L-THREONINE
HET TH5 D 181 10 HET TH5 F 181 10 HET TH5 H 181 10 HET TRS A1181 8 HET TRS A1182 8 HET ACT E1181 4 HET ACT G1181 4
HETNAM TH5 O-ACETYL-L-THREONINE HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM ACT ACETATE ION
HETSYN TRS TRIS BUFFER
FORMUL 4 TH5 3(C6 H11 N O4) FORMUL 9 TRS 2(C4 H12 N O3 1+) FORMUL 11 ACT 2(C2 H3 O2 1-) FORMUL 13 HOH *292(H2 O)
HELIX 1 1 GLY A 51 ALA A 62 1 12 HELIX 2 2 THR A 80 LEU A 99 1 20 HELIX 3 3 PRO A 102 GLY A 104 5 3 HELIX 4 4 PRO A 119 LYS A 128 1 10 HELIX 5 5 GLY A 138 ILE A 146 1 9 HELIX 6 6 ASP B 193 THR B 208 1 16 HELIX 7 7 PHE B 209 ALA B 211 5 3 HELIX 8 8 ASP B 236 ASP B 258 1 23 HELIX 9 9 ASP B 275 ASN B 288 1 14 HELIX 10 10 SER B 289 GLY B 298 1 10 HELIX 11 11 TRP B 303 LYS B 312 1 10 HELIX 12 12 ASP B 344 ARG B 356 1 13 HELIX 13 13 THR B 381 TYR B 391 1 11 HELIX 14 14 GLY C 51 ALA C 62 1 12 HELIX 15 15 THR C 80 LEU C 99 1 20 HELIX 16 16 PRO C 102 GLY C 104 5 3 HELIX 17 17 PRO C 119 LYS C 128 1 10 HELIX 18 18 GLY C 138 ILE C 146 1 9 HELIX 19 19 ASP D 193 THR D 208 1 16 HELIX 20 20 PHE D 209 ALA D 211 5 3 HELIX 21 21 ASP D 236 ASP D 258 1 23 HELIX 22 22 ASP D 275 ASN D 288 1 14 HELIX 23 23 SER D 289 GLY D 298 1 10 HELIX 24 24 TRP D 303 LYS D 312 1 10 HELIX 25 25 ASP D 344 ARG D 356 1 13 HELIX 26 26 THR D 381 GLU D 390 1 10 HELIX 27 27 GLY E 51 ALA E 62 1 12 HELIX 28 28 THR E 80 LEU E 99 1 20 HELIX 29 29 PRO E 102 GLY E 104 5 3 HELIX 30 30 PRO E 119 LYS E 128 1 10 HELIX 31 31 GLY E 138 ILE E 146 1 9 HELIX 32 32 ASP F 193 THR F 208 1 16 HELIX 33 33 PHE F 209 ALA F 211 5 3 HELIX 34 34 ASP F 236 ASP F 258 1 23 HELIX 35 35 ASP F 275 ASN F 288 1 14 HELIX 36 36 SER F 289 GLY F 298 1 10 HELIX 37 37 ASN F 302 LYS F 312 1 11 HELIX 38 38 THR F 381 TYR F 391 1 11 HELIX 39 39 GLY G 51 ALA G 62 1 12 HELIX 40 40 THR G 80 GLY G 100 1 21 HELIX 41 41 PRO G 102 GLY G 104 5 3 HELIX 42 42 PRO G 119 LYS G 128 1 10 HELIX 43 43 GLY G 138 MET G 147 1 10 HELIX 44 44 ASP H 193 THR H 208 1 16 HELIX 45 45 PHE H 209 ALA H 211 5 3 HELIX 46 46 ASP H 236 ASP H 258 1 23 HELIX 47 47 ASP H 275 ASN H 288 1 14 HELIX 48 48 SER H 289 GLY H 298 1 10 HELIX 49 49 TRP H 303 LYS H 312 1 10 HELIX 50 50 GLU H 353 GLY H 357 5 5 HELIX 51 51 THR H 381 GLU H 390 1 10
SHEET 1 AA 4 PHE A 12 ALA A 17 0 SHEET 2 AA 4 PHE A 29 SER A 34 -1 O PHE A 29 N ALA A 17 SHEET 3 AA 4 GLY A 68 ALA A 73 -1 O VAL A 69 N LEU A 32 SHEET 4 AA 4 MET A 106 THR A 111 1 O LEU A 107 N VAL A 70 SHEET 1 AB 5 ALA A 38 PHE A 44 0 SHEET 2 AB 5 THR B 223 GLU B 234 -1 O ALA B 224 N VAL A 43 SHEET 3 AB 5 LEU B 183 ARG B 191 1 O THR B 184 N VAL B 225 SHEET 4 AB 5 ALA A 163 LYS A 170 -1 O THR A 164 N ASP B 189 SHEET 5 AB 5 LYS A 154 VAL A 160 -1 O LYS A 154 N ALA A 169 SHEET 1 BA 5 VAL B 331 TYR B 334 0 SHEET 2 BA 5 THR B 325 PHE B 328 -1 O ILE B 326 N VAL B 333 SHEET 3 BA 5 GLU B 359 ASP B 365 -1 O GLY B 363 N ARG B 327 SHEET 4 BA 5 LEU B 265 ALA B 273 1 O LEU B 265 N VAL B 360 SHEET 5 BA 5 GLY B 371 CYS B 378 -1 O GLY B 371 N ALA B 273 SHEET 1 CA 4 PHE C 12 ALA C 17 0 SHEET 2 CA 4 PHE C 29 SER C 34 -1 O PHE C 29 N ALA C 17 SHEET 3 CA 4 GLY C 68 ALA C 73 -1 O VAL C 69 N LEU C 32 SHEET 4 CA 4 MET C 106 THR C 111 1 O LEU C 107 N VAL C 70 SHEET 1 CB 5 ALA C 38 PHE C 44 0 SHEET 2 CB 5 THR D 223 GLU D 234 -1 O ALA D 224 N VAL C 43 SHEET 3 CB 5 LEU D 183 ARG D 191 1 O THR D 184 N VAL D 225 SHEET 4 CB 5 ALA C 163 LYS C 170 -1 O THR C 164 N ASP D 189 SHEET 5 CB 5 LYS C 154 VAL C 160 -1 O LYS C 154 N ALA C 169 SHEET 1 DA 5 VAL D 331 TYR D 334 0 SHEET 2 DA 5 THR D 325 PHE D 328 -1 O ILE D 326 N VAL D 333 SHEET 3 DA 5 GLU D 359 ASP D 365 -1 O GLY D 363 N ARG D 327 SHEET 4 DA 5 LEU D 265 ALA D 273 1 O LEU D 265 N VAL D 360 SHEET 5 DA 5 GLY D 371 CYS D 378 -1 O GLY D 371 N ALA D 273 SHEET 1 EA 4 PHE E 12 ALA E 17 0 SHEET 2 EA 4 PHE E 29 SER E 34 -1 O PHE E 29 N ALA E 17 SHEET 3 EA 4 GLY E 68 ALA E 73 -1 O VAL E 69 N LEU E 32 SHEET 4 EA 4 MET E 106 THR E 111 1 O LEU E 107 N VAL E 70 SHEET 1 EB 5 ALA E 38 PHE E 44 0 SHEET 2 EB 5 THR F 223 GLU F 234 -1 O ALA F 224 N VAL E 43 SHEET 3 EB 5 LEU F 183 ARG F 191 1 O THR F 184 N VAL F 225 SHEET 4 EB 5 ALA E 163 LYS E 170 -1 O THR E 164 N ASP F 189 SHEET 5 EB 5 LYS E 154 VAL E 160 -1 O LYS E 154 N ALA E 169 SHEET 1 FA 5 VAL F 331 TYR F 334 0 SHEET 2 FA 5 THR F 325 PHE F 328 -1 O ILE F 326 N VAL F 333 SHEET 3 FA 5 GLU F 359 ASP F 365 -1 O GLY F 363 N ARG F 327 SHEET 4 FA 5 LEU F 265 ALA F 273 1 O LEU F 265 N VAL F 360 SHEET 5 FA 5 GLY F 371 CYS F 378 -1 O GLY F 371 N ALA F 273 SHEET 1 GA 4 PHE G 12 ALA G 17 0 SHEET 2 GA 4 PHE G 29 SER G 34 -1 O PHE G 29 N ALA G 17 SHEET 3 GA 4 GLY G 68 ALA G 73 -1 O VAL G 69 N LEU G 32 SHEET 4 GA 4 MET G 106 THR G 111 1 O LEU G 107 N VAL G 70 SHEET 1 GB 5 ALA G 38 PHE G 44 0 SHEET 2 GB 5 THR H 223 GLU H 234 -1 O ALA H 224 N VAL G 43 SHEET 3 GB 5 LEU H 183 ARG H 191 1 O THR H 184 N VAL H 225 SHEET 4 GB 5 ALA G 163 LYS G 170 -1 O THR G 164 N ASP H 189 SHEET 5 GB 5 LYS G 154 VAL G 160 -1 O LYS G 154 N ALA G 169 SHEET 1 HA 5 VAL H 331 TYR H 334 0 SHEET 2 HA 5 THR H 325 PHE H 328 -1 O ILE H 326 N VAL H 333 SHEET 3 HA 5 GLU H 359 ASP H 365 -1 O GLY H 363 N ARG H 327 SHEET 4 HA 5 LEU H 265 ALA H 273 1 O LEU H 265 N VAL H 360 SHEET 5 HA 5 GLY H 371 CYS H 378 -1 O GLY H 371 N ALA H 273
LINK C TH5 D 181 N LEU D 182 1555 1555 1.26 LINK C TH5 F 181 N LEU F 182 1555 1555 1.23 LINK C TH5 H 181 N LEU H 182 1555 1555 1.21
CISPEP 1 TYR B 334 PRO B 335 0 1.95 CISPEP 2 GLU B 390 TYR B 391 0 -20.24 CISPEP 3 TYR D 334 PRO D 335 0 4.03 CISPEP 4 TYR F 334 PRO F 335 0 4.15 CISPEP 5 GLU F 390 TYR F 391 0 -8.60 CISPEP 6 TYR H 334 PRO H 335 0 4.66
SITE 1 AC1 2 THR E 148 TH5 F 181 SITE 1 AC2 3 THR G 148 GLY G 173 TH5 H 181 SITE 1 AC3 11 THR A 111 GLY A 112 THR A 148 THR A 149 SITE 2 AC3 11 LYS A 170 GLY A 171 VAL A 172 GLY A 173 SITE 3 AC3 11 MET A 174 THR B 181 GLU B 260 SITE 1 AC4 5 ASP A 24 ARG A 26 ARG A 74 THR A 148 SITE 2 AC4 5 THR A 149
CRYST1 61.273 73.878 172.166 90.00 92.71 90.00 P 1 21 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016320 0.000000 0.000772 0.00000
SCALE2 0.000000 0.013536 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005815 0.00000
MTRIX1 1 0.999765 -0.020054 -0.008257 -3.87200 1
MTRIX2 1 0.020961 0.991215 0.130590 -26.50400 1
MTRIX3 1 0.005566 -0.130732 0.991402 -5.25500 1
MTRIX1 2 0.780333 -0.027043 -0.624779 -19.69000 1
MTRIX2 2 -0.038419 -0.999251 -0.004732 31.74600 1
MTRIX3 2 -0.624183 0.027696 -0.780788 -67.59900 1
MTRIX1 3 0.764591 -0.019528 -0.644220 -23.65000 1
MTRIX2 3 -0.088313 -0.993288 -0.074704 -4.18200 1
MTRIX3 3 -0.638437 0.114011 -0.761183 -74.93300 1
MTRIX1 4 0.999970 0.007643 -0.000806 -4.37100 1
MTRIX2 4 -0.007489 0.992572 0.121428 -26.79500 1
MTRIX3 4 0.001728 -0.121419 0.992600 -5.51100 1
MTRIX1 5 0.792767 -0.001959 -0.609521 -20.49900 1
MTRIX2 5 -0.021425 -0.999466 -0.024653 31.23700 1
MTRIX3 5 -0.609148 0.032603 -0.792386 -68.09000 1
MTRIX1 6 0.785642 0.000687 -0.618682 -23.37900 1
MTRIX2 6 -0.072405 -0.993026 -0.093047 -4.80900 1
MTRIX3 6 -0.614431 0.117897 -0.780112 -75.75500 1