10 20 30 40 50 60 70 80 2RPR - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER METAL BINDING PROTEIN 24-JUL-08 2RPR
TITLE SOLUTION STRUCTURE OF THE FIFTH FLYWCH DOMAIN OF FLYWCH-TYPE TITLE 2 ZINC FINGER-CONTAINING PROTEIN 1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLYWCH-TYPE ZINC FINGER-CONTAINING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FLYWCH-TYPE 5, UNP RESIDUES 595-674; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FLYWCH1; SOURCE 6 EXPRESSION_SYSTEM: CELL-FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: P060116-06
KEYWDS FLYWCH DOMAIN, ALTERNATIVE SPLICING, DNA-BINDING, METAL- KEYWDS 2 BINDING, NUCLEUS, ZINC, ZINC-FINGER, METAL BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.ENOMOTO,K.SAITO,N.TOCHIO,T.KIGAWA,S.YOKOYAMA,N.NAMEKI
REVDAT 1 04-AUG-09 2RPR 0
JRNL AUTH M.ENOMOTO,K.SAITO,N.TOCHIO,T.KIGAWA,S.YOKOYAMA, JRNL AUTH 2 N.NAMEKI JRNL TITL SOLUTION STRUCTURE OF THE FIFTH FLYWCH DOMAIN OF JRNL TITL 2 FLYWCH-TYPE ZINC FINGER-CONTAINING PROTEIN 1 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2RPR COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-JUL-08. REMARK 100 THE RCSB ID CODE IS RCSB150137.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.3 MM FLYWCH_DOMAIN, 0.05 MM REMARK 210 ZINC ION, 20 MM D-TRIS- REMARK 210 HCL(PH7.0), 100 MM NACL, 1 MM REMARK 210 D-DTT, 0.02 % NAN3, 10% D2O, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1, NMRPIPE, XWINNMR, REMARK 210 NMRVIEW, KUJIRA REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 10 -172.33 -69.85 REMARK 500 1 SER A 17 -174.02 -54.13 REMARK 500 1 LEU A 18 101.86 -34.56 REMARK 500 1 ALA A 36 32.68 -88.85 REMARK 500 1 CYS A 44 109.60 -50.16 REMARK 500 1 ASP A 46 30.86 -85.47 REMARK 500 1 ARG A 49 -60.56 -96.70 REMARK 500 2 LEU A 8 141.40 -175.11 REMARK 500 2 PRO A 10 -165.20 -69.73 REMARK 500 2 LEU A 18 28.17 41.25 REMARK 500 2 SER A 27 19.94 56.05 REMARK 500 2 ALA A 36 38.01 -82.54 REMARK 500 2 CYS A 44 108.46 -46.10 REMARK 500 2 ASP A 46 42.06 -81.39 REMARK 500 2 MET A 66 -65.10 -93.87 REMARK 500 3 SER A 2 36.24 -90.65 REMARK 500 3 PRO A 10 -163.83 -69.80 REMARK 500 4 PRO A 10 -169.02 -69.77 REMARK 500 4 ASP A 46 32.06 -88.26 REMARK 500 4 MET A 66 -62.25 -103.40 REMARK 500 4 GLU A 85 -64.15 -92.28 REMARK 500 5 PRO A 10 -166.71 -69.72 REMARK 500 5 SER A 17 -75.92 -34.79 REMARK 500 5 ASP A 46 48.19 -85.47 REMARK 500 5 ARG A 53 50.23 -105.58 REMARK 500 6 SER A 3 65.01 -119.58 REMARK 500 6 PRO A 10 -165.25 -69.79 REMARK 500 6 SER A 17 -68.99 -106.73 REMARK 500 6 LEU A 18 36.44 -84.11 REMARK 500 6 CYS A 44 107.56 -46.59 REMARK 500 6 ASP A 46 40.52 -88.80 REMARK 500 6 ARG A 49 -61.93 -92.41 REMARK 500 6 CYS A 52 72.86 -105.50 REMARK 500 6 SER A 54 122.72 -35.55 REMARK 500 7 PRO A 10 -176.10 -69.68 REMARK 500 7 CYS A 44 108.39 -46.42 REMARK 500 7 ASP A 46 35.79 -84.09 REMARK 500 7 ARG A 86 73.41 -103.55 REMARK 500 8 LEU A 18 71.15 -68.24 REMARK 500 8 LYS A 32 108.58 -45.18 REMARK 500 8 ASP A 46 44.31 -79.69 REMARK 500 9 PRO A 10 -179.50 -69.70 REMARK 500 9 CYS A 44 114.11 -38.16 REMARK 500 9 ASP A 46 43.32 -85.56 REMARK 500 9 MET A 66 -62.82 -102.46 REMARK 500 9 GLU A 85 -72.26 -98.01 REMARK 500 10 LEU A 8 143.97 -34.28 REMARK 500 10 PRO A 10 -167.89 -69.82 REMARK 500 10 LEU A 18 70.87 -101.84 REMARK 500 10 ASP A 46 36.60 -83.33 REMARK 500 10 ARG A 49 -62.12 -98.79 REMARK 500 10 ASP A 74 75.67 -114.37 REMARK 500 10 LEU A 75 -19.76 -49.56 REMARK 500 10 GLU A 85 -72.77 -82.51 REMARK 500 11 SER A 5 -61.31 -127.77 REMARK 500 11 PRO A 10 -178.45 -69.80 REMARK 500 11 CYS A 44 106.48 -44.35 REMARK 500 11 ASP A 46 31.31 -85.31 REMARK 500 11 SER A 68 -179.60 -69.25 REMARK 500 12 PRO A 10 -164.93 -69.78 REMARK 500 12 ASP A 46 36.44 -83.54 REMARK 500 12 SER A 54 128.26 -39.32 REMARK 500 12 MET A 66 -61.04 -104.77 REMARK 500 13 SER A 2 34.28 34.52 REMARK 500 13 PRO A 10 -176.36 -69.76 REMARK 500 13 LEU A 18 42.50 -80.65 REMARK 500 13 ARG A 49 -62.51 -98.38 REMARK 500 14 ARG A 49 -62.75 -93.54 REMARK 500 14 ARG A 53 45.61 -81.91 REMARK 500 14 MET A 66 -63.43 -93.56 REMARK 500 14 ASP A 74 79.35 -101.27 REMARK 500 15 LEU A 8 108.41 -160.97 REMARK 500 15 PRO A 10 -174.77 -69.73 REMARK 500 15 ALA A 36 38.16 -87.27 REMARK 500 15 CYS A 44 108.93 -55.13 REMARK 500 15 ARG A 45 -30.14 -39.98 REMARK 500 15 MET A 66 -61.61 -104.67 REMARK 500 16 LEU A 8 96.90 -35.08 REMARK 500 17 PRO A 10 -169.89 -69.75 REMARK 500 17 LEU A 18 64.03 -112.84 REMARK 500 17 ALA A 36 69.14 -109.82 REMARK 500 17 ASP A 46 45.49 -82.82 REMARK 500 17 MET A 66 -61.93 -105.59 REMARK 500 17 SER A 68 -175.50 -68.73 REMARK 500 17 ARG A 86 52.52 -90.57 REMARK 500 18 PRO A 10 -171.06 -69.76 REMARK 500 18 ALA A 36 34.73 -95.30 REMARK 500 18 CYS A 44 106.55 -51.06 REMARK 500 19 PRO A 10 -170.78 -69.82 REMARK 500 19 CYS A 44 104.97 -51.30 REMARK 500 19 ASP A 46 48.49 -87.86 REMARK 500 19 SER A 54 105.14 -40.82 REMARK 500 20 SER A 2 95.38 -50.50 REMARK 500 20 PRO A 10 -170.04 -69.75 REMARK 500 20 CYS A 44 107.58 -52.85 REMARK 500 20 ASP A 46 43.92 -81.96 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 44 SG REMARK 620 2 CYS A 52 SG 106.3 REMARK 620 3 HIS A 69 ND1 100.6 110.0 REMARK 620 4 HIS A 71 NE2 90.6 98.2 145.0 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201
DBREF 2RPR A 8 87 UNP Q4VC44 FWCH1_HUMAN 595 674
SEQADV 2RPR GLY A 1 UNP Q4VC44 EXPRESSION TAG SEQADV 2RPR SER A 2 UNP Q4VC44 EXPRESSION TAG SEQADV 2RPR SER A 3 UNP Q4VC44 EXPRESSION TAG SEQADV 2RPR GLY A 4 UNP Q4VC44 EXPRESSION TAG SEQADV 2RPR SER A 5 UNP Q4VC44 EXPRESSION TAG SEQADV 2RPR SER A 6 UNP Q4VC44 EXPRESSION TAG SEQADV 2RPR GLY A 7 UNP Q4VC44 EXPRESSION TAG
SEQRES 1 A 87 GLY SER SER GLY SER SER GLY LEU ARG PRO LEU GLU PHE SEQRES 2 A 87 LEU ARG THR SER LEU GLY GLY ARG PHE LEU VAL HIS GLU SEQRES 3 A 87 SER PHE LEU TYR ARG LYS GLU LYS ALA ALA GLY GLU LYS SEQRES 4 A 87 VAL TYR TRP MET CYS ARG ASP GLN ALA ARG LEU GLY CYS SEQRES 5 A 87 ARG SER ARG ALA ILE THR GLN GLY HIS ARG ILE MET VAL SEQRES 6 A 87 MET ARG SER HIS CYS HIS GLN PRO ASP LEU ALA GLY LEU SEQRES 7 A 87 GLU ALA LEU ARG GLN ARG GLU ARG LEU
HET ZN A 201 1
HETNAM ZN ZINC ION
FORMUL 2 ZN ZN 2+
HELIX 1 1 ASP A 46 ALA A 48 5 3 HELIX 2 2 ASP A 74 ARG A 84 1 11
SHEET 1 A 6 GLU A 12 THR A 16 0 SHEET 2 A 6 GLY A 20 HIS A 25 -1 O PHE A 22 N LEU A 14 SHEET 3 A 6 PHE A 28 ALA A 35 -1 O TYR A 30 N LEU A 23 SHEET 4 A 6 VAL A 40 CYS A 44 -1 O TYR A 41 N GLU A 33 SHEET 5 A 6 ARG A 55 GLN A 59 -1 O ALA A 56 N TRP A 42 SHEET 6 A 6 ARG A 62 VAL A 65 -1 O MET A 64 N ILE A 57
LINK SG CYS A 44 ZN ZN A 201 1555 1555 2.35 LINK SG CYS A 52 ZN ZN A 201 1555 1555 2.28 LINK ND1 HIS A 69 ZN ZN A 201 1555 1555 2.10 LINK NE2 HIS A 71 ZN ZN A 201 1555 1555 2.10
SITE 1 AC1 5 PHE A 28 CYS A 44 ASP A 46 CYS A 52 SITE 2 AC1 5 HIS A 69
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000