10 20 30 40 50 60 70 80 2RNZ - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 01-MAR-08 2RNZ
TITLE SOLUTION STRUCTURE OF THE PRESUMED CHROMODOMAIN OF THE TITLE 2 YEAST HISTONE ACETYLTRANSFERASE, ESA1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE ACETYLTRANSFERASE ESA1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 17-89; COMPND 5 EC: 2.3.1.48; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B
KEYWDS ESA1, HAT, CHROMODOMAIN, TUDOR DOMAIN, RNA BINDING, KEYWDS 2 ACTIVATOR, CHROMATIN REGULATOR, TRANSCRIPTION, KEYWDS 3 TRANSCRIPTION REGULATION, TRANSFERASE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR H.SHIMOJO,N.SANO,Y.MORIWAKI,M.OKUDA,M.HORIKOSHI,Y.NISHIMURA
REVDAT 3 24-FEB-09 2RNZ 1 VERSN REVDAT 2 03-JUN-08 2RNZ 1 JRNL REVDAT 1 29-APR-08 2RNZ 0
JRNL AUTH H.SHIMOJO,N.SANO,Y.MORIWAKI,M.OKUDA,M.HORIKOSHI, JRNL AUTH 2 Y.NISHIMURA JRNL TITL NOVEL STRUCTURAL AND FUNCTIONAL MODE OF A KNOT JRNL TITL 2 ESSENTIAL FOR RNA BINDING ACTIVITY OF THE ESA1 JRNL TITL 3 PRESUMED CHROMODOMAIN JRNL REF J.MOL.BIOL. V. 378 987 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18407291 JRNL DOI 10.1016/J.JMB.2008.03.021
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : P.GUNTERT ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2RNZ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-MAR-08. REMARK 100 THE RCSB ID CODE IS RCSB150077.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 295 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.1MM CHROMODOMAIN [U-99% REMARK 210 13C; U-99% 15N], 200MM REMARK 210 POTASSIUM PHOSPHATE, 5MM D- REMARK 210 DTT, 90% H2O/10% D2O; 0.1MM REMARK 210 CHROMODOMAIN [U-99% 13C; U-99% REMARK 210 15N], 200MM POTASSIUM REMARK 210 PHOSPHATE, 5MM D-DTT, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC, 3D CBCA(CO) REMARK 210 NH, 3D HNCACB, 3D HNCO, 3D REMARK 210 HN(CO)CA, 2D 1H-13C HSQC, 3D REMARK 210 HCCH-TOCSY, 3D 1H-15N NOESY, REMARK 210 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 800 MHZ, 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE, INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER, VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : OLIVIA, NMRPIPE REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 600 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 2 75.87 -112.26 REMARK 500 1 LEU A 9 -69.88 -104.33 REMARK 500 1 PRO A 11 90.59 -69.74 REMARK 500 1 ARG A 12 91.69 -65.18 REMARK 500 1 ASP A 64 95.71 -65.33 REMARK 500 1 ASP A 75 -74.10 -128.17 REMARK 500 2 HIS A 0 51.98 -100.10 REMARK 500 2 SER A 6 115.85 -175.84 REMARK 500 2 HIS A 15 -73.30 -119.96 REMARK 500 2 ASP A 64 105.58 -54.08 REMARK 500 2 PRO A 81 79.41 -69.73 REMARK 500 2 LYS A 84 125.65 -174.66 REMARK 500 3 HIS A 3 138.10 -174.16 REMARK 500 3 PRO A 11 -170.79 -69.68 REMARK 500 3 LEU A 41 -69.55 -102.64 REMARK 500 3 ASN A 60 176.02 -56.41 REMARK 500 3 ASP A 64 106.46 -51.90 REMARK 500 3 ASP A 75 -60.39 -100.04 REMARK 500 4 HIS A 1 68.70 -113.72 REMARK 500 4 HIS A 4 88.10 -68.93 REMARK 500 4 LEU A 41 -68.15 -100.00 REMARK 500 4 ASN A 58 -69.94 -132.78 REMARK 500 4 ASN A 60 60.05 63.36 REMARK 500 4 LEU A 74 75.87 -107.84 REMARK 500 4 LYS A 84 93.58 -63.68 REMARK 500 5 SER A 7 77.77 -100.50 REMARK 500 5 LEU A 9 -69.16 -129.35 REMARK 500 5 HIS A 15 -70.73 -132.84 REMARK 500 5 LEU A 41 -71.70 -108.15 REMARK 500 5 ASP A 64 108.51 -51.75 REMARK 500 5 LEU A 74 179.02 -57.55 REMARK 500 5 PRO A 81 81.06 -69.80 REMARK 500 6 LEU A 41 -68.12 -100.15 REMARK 500 6 VAL A 57 -40.21 -131.97 REMARK 500 6 ASN A 58 -74.09 -87.11 REMARK 500 6 TYR A 59 111.11 -174.37 REMARK 500 6 LEU A 74 -74.45 -79.97 REMARK 500 6 ASP A 75 -66.79 -136.08 REMARK 500 6 LYS A 76 -177.31 -60.35 REMARK 500 6 PRO A 81 84.37 -69.76 REMARK 500 7 LEU A 9 -67.33 -108.59 REMARK 500 7 LEU A 41 -69.72 -103.10 REMARK 500 7 VAL A 57 107.14 -51.69 REMARK 500 7 ASP A 64 107.02 -51.90 REMARK 500 7 LYS A 82 106.27 -59.73 REMARK 500 8 HIS A 1 66.49 -117.43 REMARK 500 8 HIS A 4 140.34 -174.01 REMARK 500 8 PRO A 11 -176.19 -69.70 REMARK 500 8 SER A 14 31.62 -96.49 REMARK 500 8 LEU A 41 -70.20 -105.13 REMARK 500 8 ASN A 60 108.32 -164.24 REMARK 500 8 ASP A 64 88.50 -68.11 REMARK 500 8 ASP A 75 -74.07 -99.97 REMARK 500 9 SER A 14 99.73 -57.52 REMARK 500 9 LEU A 41 -67.61 -102.78 REMARK 500 9 ASN A 58 -74.70 -120.48 REMARK 500 9 ASN A 60 24.25 -148.97 REMARK 500 10 LEU A 9 -72.88 -117.10 REMARK 500 10 LEU A 41 -70.84 -105.10 REMARK 500 10 ASP A 64 90.06 -68.77 REMARK 500 10 PRO A 81 78.66 -69.79 REMARK 500 11 SER A 7 -175.19 -69.57 REMARK 500 11 PRO A 11 -171.98 -69.71 REMARK 500 11 ARG A 12 179.04 -58.69 REMARK 500 11 SER A 14 100.99 -55.41 REMARK 500 11 HIS A 15 -169.27 -179.33 REMARK 500 11 LEU A 41 -70.91 -107.57 REMARK 500 11 ASN A 58 -169.39 -60.98 REMARK 500 11 LYS A 61 -70.87 -63.29 REMARK 500 11 ASP A 64 98.60 -58.21 REMARK 500 11 PRO A 81 96.66 -69.77 REMARK 500 12 PRO A 11 78.46 -69.83 REMARK 500 12 HIS A 15 -68.44 -94.29 REMARK 500 12 PRO A 50 -177.70 -69.81 REMARK 500 12 ASP A 64 105.29 -52.93 REMARK 500 12 LEU A 74 -62.03 -101.84 REMARK 500 12 ASP A 75 -74.17 -118.26 REMARK 500 12 LYS A 84 119.19 -165.06 REMARK 500 13 HIS A 2 127.94 -173.48 REMARK 500 13 HIS A 4 132.65 -173.30 REMARK 500 13 SER A 7 -176.97 -65.30 REMARK 500 13 LEU A 41 -69.22 -100.98 REMARK 500 13 ASN A 60 173.53 -53.73 REMARK 500 13 LEU A 74 178.77 -56.58 REMARK 500 13 LYS A 76 177.70 -56.06 REMARK 500 14 HIS A 0 73.63 -109.02 REMARK 500 14 LEU A 41 -69.05 -105.10 REMARK 500 15 HIS A 0 131.15 -170.99 REMARK 500 15 SER A 6 145.98 -177.16 REMARK 500 15 LEU A 9 -74.49 -100.63 REMARK 500 15 ARG A 12 103.75 -51.90 REMARK 500 15 LEU A 41 -69.32 -101.36 REMARK 500 15 VAL A 57 22.28 -140.78 REMARK 500 15 ASN A 60 114.05 -179.36 REMARK 500 15 ASP A 64 90.80 -67.55 REMARK 500 15 PRO A 81 78.90 -69.76 REMARK 500 15 LYS A 84 132.96 -171.74 REMARK 500 16 HIS A 0 136.74 -174.60 REMARK 500 16 HIS A 15 -71.92 -94.04 REMARK 500 16 ASN A 60 170.78 -52.78 REMARK 500 16 LEU A 74 170.69 -52.49 REMARK 500 16 LYS A 82 57.95 -115.16 REMARK 500 17 ASP A 64 102.81 -51.79 REMARK 500 18 HIS A 1 -71.34 -92.53 REMARK 500 18 ASP A 64 104.45 -52.07 REMARK 500 18 LYS A 84 92.82 -69.20 REMARK 500 19 SER A 7 144.75 -173.02 REMARK 500 19 ASN A 58 45.73 -97.08 REMARK 500 19 ASN A 60 -178.94 -60.68 REMARK 500 19 ASP A 64 106.17 -51.88 REMARK 500 19 ASP A 75 -67.28 -127.74 REMARK 500 20 HIS A 2 133.55 -172.48 REMARK 500 20 HIS A 3 -71.99 -87.22 REMARK 500 20 LEU A 9 -70.21 -130.31 REMARK 500 20 LEU A 41 -65.81 -107.22 REMARK 500 20 VAL A 57 42.50 -93.06 REMARK 500 20 ASN A 60 105.08 -53.17 REMARK 500 20 ASP A 64 98.02 -65.99 REMARK 500 20 ASP A 75 41.42 -140.00 REMARK 500 20 PRO A 81 85.87 -69.73 REMARK 500 20 LYS A 82 107.51 -169.42 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2RO0 RELATED DB: PDB
DBREF 2RNZ A 17 89 UNP Q08649 ESA1_YEAST 17 89
SEQADV 2RNZ MET A -4 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ GLY A -3 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ SER A -2 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ SER A -1 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ HIS A 0 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ HIS A 1 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ HIS A 2 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ HIS A 3 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ HIS A 4 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ HIS A 5 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ SER A 6 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ SER A 7 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ GLY A 8 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ LEU A 9 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ VAL A 10 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ PRO A 11 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ ARG A 12 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ GLY A 13 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ SER A 14 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ HIS A 15 UNP Q08649 EXPRESSION TAG SEQADV 2RNZ MET A 16 UNP Q08649 EXPRESSION TAG
SEQRES 1 A 94 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 94 LEU VAL PRO ARG GLY SER HIS MET SER VAL ASP ASP ILE SEQRES 3 A 94 ILE ILE LYS CYS GLN CYS TRP VAL GLN LYS ASN ASP GLU SEQRES 4 A 94 GLU ARG LEU ALA GLU ILE LEU SER ILE ASN THR ARG LYS SEQRES 5 A 94 ALA PRO PRO LYS PHE TYR VAL HIS TYR VAL ASN TYR ASN SEQRES 6 A 94 LYS ARG LEU ASP GLU TRP ILE THR THR ASP ARG ILE ASN SEQRES 7 A 94 LEU ASP LYS GLU VAL LEU TYR PRO LYS LEU LYS ALA THR SEQRES 8 A 94 ASP GLU ASP
SHEET 1 A 5 GLU A 65 THR A 68 0 SHEET 2 A 5 LYS A 51 TYR A 56 -1 N PHE A 52 O ILE A 67 SHEET 3 A 5 GLU A 34 ASN A 44 -1 N ASN A 44 O LYS A 51 SHEET 4 A 5 GLN A 26 LYS A 31 -1 N VAL A 29 O ARG A 36 SHEET 5 A 5 ILE A 72 ASN A 73 -1 O ASN A 73 N TRP A 28
CISPEP 1 ALA A 48 PRO A 49 1 -0.05 CISPEP 2 ALA A 48 PRO A 49 2 0.01 CISPEP 3 ALA A 48 PRO A 49 3 -0.04 CISPEP 4 ALA A 48 PRO A 49 4 0.08 CISPEP 5 ALA A 48 PRO A 49 5 -0.03 CISPEP 6 ALA A 48 PRO A 49 6 0.00 CISPEP 7 ALA A 48 PRO A 49 7 -0.03 CISPEP 8 ALA A 48 PRO A 49 8 0.01 CISPEP 9 ALA A 48 PRO A 49 9 0.02 CISPEP 10 ALA A 48 PRO A 49 10 0.04 CISPEP 11 ALA A 48 PRO A 49 11 -0.04 CISPEP 12 ALA A 48 PRO A 49 12 -0.03 CISPEP 13 ALA A 48 PRO A 49 13 0.05 CISPEP 14 ALA A 48 PRO A 49 14 0.02 CISPEP 15 ALA A 48 PRO A 49 15 0.04 CISPEP 16 ALA A 48 PRO A 49 16 0.03 CISPEP 17 ALA A 48 PRO A 49 17 0.07 CISPEP 18 ALA A 48 PRO A 49 18 0.08 CISPEP 19 ALA A 48 PRO A 49 19 -0.01 CISPEP 20 ALA A 48 PRO A 49 20 -0.01
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000