10 20 30 40 50 60 70 80 2RN8 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 08-DEC-07 2RN8
TITLE NMR STRUCTURE NOTE: MURINE ITK SH3 DOMAIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE ITK/TSK; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN; COMPND 5 SYNONYM: T-CELL-SPECIFIC KINASE, IL-2-INDUCIBLE T-CELL COMPND 6 KINASE, KINASE EMT, KINASE TLK; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ITK, EMT, TLK, TSK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX2T
KEYWDS ITK, SH3, BETA BARREL, 310 HELIX, REGULATORY, ATP-BINDING, KEYWDS 2 KINASE, MEMBRANE, METAL-BINDING, NUCLEOTIDE-BINDING, KEYWDS 3 PHOSPHOPROTEIN, SH2 DOMAIN, SH3 DOMAIN, TRANSFERASE, KEYWDS 4 TYROSINE-PROTEIN KINASE, ZINC, ZINC-FINGER
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR A.J.SEVERIN
REVDAT 2 24-FEB-09 2RN8 1 VERSN REVDAT 1 25-DEC-07 2RN8 0
JRNL AUTH A.J.SEVERIN,D.B.FULTON,A.H.ANDREOTTI JRNL TITL NMR STRUCTURE NOTE: MURINE ITK SH3 DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: XPLOR-NIH REFINE.PY SCRIPT
REMARK 4 REMARK 4 2RN8 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-DEC-07. REMARK 100 THE RCSB ID CODE IS RCSB150056.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 75 MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 3.4MM [U-100% 13C; U-100% REMARK 210 15N] ITK SH3, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 15N 1H HSQC, CBCA(CO)CH, REMARK 210 HNCACB, HBHA(CO)NH, HBHANH, REMARK 210 HNCO, (HB)CB(CGCDCE)HE, (HB) REMARK 210 CB(CGCD)HD, HCCH-TOCSY, 3D 15N REMARK 210 -EDITED TOCSY, 2D HOMONUCLEAR REMARK 210 TOCSY, 2D HOMONUCLEAR NOESY, REMARK 210 3D 13C-EDITED ALIPHATIC NOESY, REMARK 210 3D 13C-EDITED AROMATIC NOESY, REMARK 210 15N-EDITED NOESY, 15N-EDITED REMARK 210 TOCSY, IPAP 1H-15N, J REMARK 210 CORRELATION HNHA, LONG RANGE REMARK 210 COUPLING HNCO HYDROGEN BOND REMARK 210 EXPERIMENT REMARK 210 SPECTROMETER FIELD STRENGTH : 700.133 MHZ REMARK 210 SPECTROMETER MODEL : AVII REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 60 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 170 59.41 -168.58 REMARK 500 1 ASP A 186 154.92 170.91 REMARK 500 1 PRO A 187 -15.84 -40.55 REMARK 500 1 ASP A 195 -24.51 83.20 REMARK 500 1 LEU A 201 -66.25 -105.01 REMARK 500 1 GLU A 205 -169.43 -52.86 REMARK 500 1 ILE A 206 -30.35 -151.51 REMARK 500 1 SER A 230 162.42 56.82 REMARK 500 2 SER A 170 62.09 179.44 REMARK 500 2 ASN A 185 65.07 -111.08 REMARK 500 2 ASP A 195 -22.43 81.06 REMARK 500 2 LEU A 201 -64.32 -106.57 REMARK 500 2 GLU A 205 105.02 58.53 REMARK 500 2 ILE A 206 -32.02 -156.84 REMARK 500 2 HIS A 207 -55.02 -151.11 REMARK 500 2 SER A 230 162.91 60.17 REMARK 500 3 SER A 170 62.37 -160.53 REMARK 500 3 ASN A 185 63.19 -113.37 REMARK 500 3 ASP A 195 -18.92 82.15 REMARK 500 3 LEU A 201 -67.99 -105.92 REMARK 500 3 GLU A 205 92.46 -56.07 REMARK 500 3 SER A 230 73.40 40.46 REMARK 500 4 SER A 170 163.88 56.38 REMARK 500 4 PRO A 171 -167.23 -73.67 REMARK 500 4 ASP A 186 159.03 178.15 REMARK 500 4 PRO A 187 -8.45 -54.34 REMARK 500 4 CYS A 194 146.17 -27.45 REMARK 500 4 ASP A 195 -30.41 93.59 REMARK 500 4 LEU A 201 -65.36 -104.37 REMARK 500 4 SER A 204 94.40 178.41 REMARK 500 4 GLU A 205 11.14 -58.90 REMARK 500 4 HIS A 207 -74.40 -129.90 REMARK 500 4 SER A 230 76.65 39.22 REMARK 500 5 PRO A 171 45.27 -77.83 REMARK 500 5 GLU A 172 -47.49 67.61 REMARK 500 5 ASP A 186 154.94 170.37 REMARK 500 5 PRO A 187 -16.71 -40.30 REMARK 500 5 ASP A 195 -22.80 85.15 REMARK 500 5 LEU A 201 -67.05 -106.56 REMARK 500 5 SER A 203 33.74 -87.73 REMARK 500 5 GLU A 205 -11.20 67.58 REMARK 500 5 SER A 230 161.66 58.83 REMARK 500 6 SER A 170 63.73 -165.21 REMARK 500 6 PRO A 171 -167.54 -76.78 REMARK 500 6 ASN A 185 71.16 -107.54 REMARK 500 6 LEU A 190 -114.74 -101.40 REMARK 500 6 ALA A 191 101.25 -177.98 REMARK 500 6 ASP A 195 -24.73 85.17 REMARK 500 6 GLU A 205 89.33 -52.85 REMARK 500 6 SER A 230 72.59 40.84 REMARK 500 7 PRO A 171 43.55 -76.24 REMARK 500 7 GLU A 172 7.41 59.31 REMARK 500 7 THR A 174 177.11 178.99 REMARK 500 7 PRO A 187 18.80 -68.44 REMARK 500 7 LEU A 190 111.09 53.16 REMARK 500 7 ASP A 195 -21.86 82.21 REMARK 500 7 GLU A 205 89.96 -56.98 REMARK 500 7 SER A 230 162.65 55.46 REMARK 500 8 PRO A 171 46.63 -78.48 REMARK 500 8 GLU A 172 -48.88 67.43 REMARK 500 8 GLU A 173 -75.33 -74.34 REMARK 500 8 THR A 174 154.86 50.66 REMARK 500 8 ASP A 181 99.56 -68.51 REMARK 500 8 ASN A 185 72.86 -108.57 REMARK 500 8 GLN A 188 44.49 -102.89 REMARK 500 8 ASP A 195 -17.64 84.35 REMARK 500 8 LEU A 201 -66.26 -107.95 REMARK 500 8 SER A 204 -29.49 -176.49 REMARK 500 8 HIS A 207 -73.17 -125.26 REMARK 500 8 TYR A 225 20.86 -78.90 REMARK 500 8 SER A 230 170.91 55.10 REMARK 500 9 GLU A 172 -110.12 -53.46 REMARK 500 9 GLU A 173 94.90 34.06 REMARK 500 9 ASP A 186 139.75 82.16 REMARK 500 9 PRO A 187 73.41 -41.49 REMARK 500 9 GLN A 188 -50.30 -147.76 REMARK 500 9 LEU A 190 114.13 52.13 REMARK 500 9 ASP A 195 -26.49 87.45 REMARK 500 9 LEU A 201 -63.42 -107.13 REMARK 500 9 GLU A 205 92.53 51.80 REMARK 500 9 ILE A 206 -48.24 -152.29 REMARK 500 9 HIS A 207 -60.96 -123.90 REMARK 500 9 SER A 230 160.67 -40.37 REMARK 500 10 SER A 170 66.37 -179.24 REMARK 500 10 PRO A 171 -169.00 -78.14 REMARK 500 10 GLU A 172 20.78 -74.55 REMARK 500 10 THR A 174 175.07 178.28 REMARK 500 10 ASN A 185 71.44 -108.28 REMARK 500 10 ASP A 195 -24.63 83.87 REMARK 500 10 LEU A 201 -66.04 -106.17 REMARK 500 10 GLU A 205 82.24 50.67 REMARK 500 10 ILE A 206 -52.85 -152.16 REMARK 500 10 SER A 230 155.09 -40.34 REMARK 500 11 SER A 170 65.61 -163.56 REMARK 500 11 PRO A 171 -166.89 -78.11 REMARK 500 11 THR A 174 179.33 176.47 REMARK 500 11 LEU A 190 -108.47 -58.97 REMARK 500 11 ALA A 191 110.20 -174.01 REMARK 500 11 ASP A 195 -24.37 85.53 REMARK 500 11 LEU A 201 -68.55 -107.35 REMARK 500 11 GLU A 205 89.18 -66.30 REMARK 500 11 SER A 230 65.67 38.09 REMARK 500 12 SER A 170 61.59 60.76 REMARK 500 12 PRO A 171 45.99 -76.64 REMARK 500 12 GLU A 172 -48.12 67.29 REMARK 500 12 THR A 174 -170.84 170.42 REMARK 500 12 ASN A 185 63.90 -112.88 REMARK 500 12 ASP A 195 -22.02 81.24 REMARK 500 12 SER A 203 23.12 -68.73 REMARK 500 12 SER A 204 46.98 -174.62 REMARK 500 12 GLU A 205 -141.79 -59.34 REMARK 500 12 HIS A 207 -59.65 -149.43 REMARK 500 12 SER A 230 162.33 57.40 REMARK 500 13 SER A 170 65.90 -171.04 REMARK 500 13 PRO A 171 -169.73 -78.70 REMARK 500 13 GLU A 172 20.33 -72.85 REMARK 500 13 ASN A 185 66.78 -112.25 REMARK 500 13 ASP A 195 -18.93 83.25 REMARK 500 13 LEU A 201 -70.68 -104.87 REMARK 500 13 SER A 204 -33.70 83.18 REMARK 500 13 GLU A 205 92.06 -66.12 REMARK 500 14 SER A 170 63.63 -162.14 REMARK 500 14 PRO A 171 -165.44 -76.69 REMARK 500 14 THR A 174 178.96 177.67 REMARK 500 14 THR A 184 100.15 79.27 REMARK 500 14 ASP A 186 151.00 -37.65 REMARK 500 14 PRO A 187 -35.26 -37.29 REMARK 500 14 ASP A 195 -22.34 82.97 REMARK 500 14 LEU A 201 -69.05 -104.29 REMARK 500 14 GLU A 205 89.23 -52.64 REMARK 500 14 SER A 230 77.38 41.02 REMARK 500 15 SER A 170 64.53 -157.80 REMARK 500 15 GLU A 172 -113.57 -55.27 REMARK 500 15 GLU A 173 97.35 35.48 REMARK 500 15 PRO A 187 17.79 -67.72 REMARK 500 15 LEU A 190 114.57 55.61 REMARK 500 15 ASP A 195 -26.46 85.99 REMARK 500 15 LEU A 201 -66.93 -106.49 REMARK 500 15 GLU A 205 -9.77 65.48 REMARK 500 15 SER A 230 154.90 -43.44 REMARK 500 16 SER A 170 64.31 -157.48 REMARK 500 16 PRO A 171 43.89 -79.55 REMARK 500 16 GLU A 172 -118.18 61.79 REMARK 500 16 GLU A 173 94.03 32.85 REMARK 500 16 ASP A 186 155.96 171.80 REMARK 500 16 PRO A 187 -16.52 -40.29 REMARK 500 16 ASP A 195 -22.80 83.61 REMARK 500 16 LEU A 201 -67.60 -105.88 REMARK 500 16 GLU A 205 89.54 -47.88 REMARK 500 16 SER A 230 73.14 39.93 REMARK 500 17 PRO A 171 -163.96 -76.74 REMARK 500 17 THR A 174 160.24 39.78 REMARK 500 17 ASP A 186 161.53 168.68 REMARK 500 17 PRO A 187 -18.65 -40.81 REMARK 500 17 ASP A 195 -23.27 84.29 REMARK 500 17 LEU A 201 -63.29 -106.95 REMARK 500 17 SER A 204 -34.25 83.02 REMARK 500 17 ASN A 215 -5.14 -58.28 REMARK 500 17 SER A 230 163.89 55.11 REMARK 500 18 SER A 170 -48.46 177.79 REMARK 500 18 PRO A 171 43.76 -83.48 REMARK 500 18 GLU A 172 -48.65 67.62 REMARK 500 18 ASP A 186 161.67 168.04 REMARK 500 18 PRO A 187 -18.37 -40.63 REMARK 500 18 ASP A 195 -22.19 85.49 REMARK 500 18 SER A 204 30.46 32.42 REMARK 500 18 HIS A 207 -82.64 -106.66 REMARK 500 18 SER A 230 74.35 44.26 REMARK 500 19 PRO A 171 46.53 -76.62 REMARK 500 19 THR A 174 179.66 177.57 REMARK 500 19 ASN A 185 68.20 -109.34 REMARK 500 19 ASP A 195 -25.69 85.96 REMARK 500 19 LEU A 201 -64.64 -105.39 REMARK 500 19 SER A 203 40.09 -87.37 REMARK 500 19 GLU A 205 -14.95 68.45 REMARK 500 20 PRO A 171 49.88 -73.24 REMARK 500 20 GLU A 172 -47.68 66.99 REMARK 500 20 ASN A 185 60.15 -117.21 REMARK 500 20 ASP A 195 -23.44 84.23 REMARK 500 20 SER A 204 -39.42 -173.96 REMARK 500 20 GLU A 205 -7.69 64.78 REMARK 500 20 HIS A 207 -71.26 -120.80 REMARK 500 20 TYR A 225 21.86 -79.92 REMARK 500 20 SER A 230 76.28 39.95 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 11018 RELATED DB: BMRB REMARK 900 RELATED ID: 2RNA RELATED DB: PDB REMARK 900 MINIMIZED AVERAGE STRUCTURE
DBREF 2RN8 A 171 232 UNP Q03526 ITK_MOUSE 177 238
SEQADV 2RN8 GLY A 169 UNP Q03526 EXPRESSION TAG SEQADV 2RN8 SER A 170 UNP Q03526 EXPRESSION TAG
SEQRES 1 A 64 GLY SER PRO GLU GLU THR LEU VAL ILE ALA LEU TYR ASP SEQRES 2 A 64 TYR GLN THR ASN ASP PRO GLN GLU LEU ALA LEU ARG CYS SEQRES 3 A 64 ASP GLU GLU TYR TYR LEU LEU ASP SER SER GLU ILE HIS SEQRES 4 A 64 TRP TRP ARG VAL GLN ASP LYS ASN GLY HIS GLU GLY TYR SEQRES 5 A 64 ALA PRO SER SER TYR LEU VAL GLU LYS SER PRO ASN
HELIX 1 1 PRO A 222 SER A 224 5 3
SHEET 1 A 5 GLU A 218 ALA A 221 0 SHEET 2 A 5 TRP A 209 GLN A 212 -1 N TRP A 209 O ALA A 221 SHEET 3 A 5 GLU A 197 LEU A 200 -1 N TYR A 199 O GLN A 212 SHEET 4 A 5 LEU A 175 ALA A 178 -1 N VAL A 176 O TYR A 198 SHEET 5 A 5 LEU A 226 GLU A 228 -1 O VAL A 227 N ILE A 177
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000