10 20 30 40 50 60 70 80 2QMC - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 15-JUL-07 2QMC
TITLE CRYSTAL STRUCTURE OF HELICOBACTER PYLORI GAMMA-GLUTAMYLTRANSPEPTIDASE TITLE 2 T380A MUTANT
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GAMMA-GLUTAMYLTRANSPEPTIDASE; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: RESIDUES 25-379; COMPND 5 SYNONYM: GGT; COMPND 6 EC: 2.3.2.2; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: GAMMA-GLUTAMYLTRANSPEPTIDASE; COMPND 10 CHAIN: B, D; COMPND 11 FRAGMENT: RESIDUES 380-567; COMPND 12 SYNONYM: GGT; COMPND 13 EC: 2.3.2.2; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 210; SOURCE 4 GENE: HP_1118; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA2; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDUET; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 12 ORGANISM_TAXID: 210; SOURCE 13 GENE: HP_1118; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: ROSETTA2; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PDUET
KEYWDS NTN-HYDROLASE, GLUTAMYLTRANSPEPTIDASE, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR J.J.BARYCKI,G.BOANCA,A.SAND
REVDAT 3 13-JUL-11 2QMC 1 VERSN REVDAT 2 24-FEB-09 2QMC 1 VERSN REVDAT 1 12-FEB-08 2QMC 0
JRNL AUTH A.L.MORROW,K.WILLIAMS,A.SAND,G.BOANCA,J.J.BARYCKI JRNL TITL CHARACTERIZATION OF HELICOBACTER PYLORI JRNL TITL 2 GAMMA-GLUTAMYLTRANSPEPTIDASE REVEALS THE MOLECULAR BASIS FOR JRNL TITL 3 SUBSTRATE SPECIFICITY AND A CRITICAL ROLE FOR THE TYROSINE JRNL TITL 4 433-CONTAINING LOOP IN CATALYSIS. JRNL REF BIOCHEMISTRY V. 46 13407 2007 JRNL REFN ISSN 0006-2960 JRNL PMID 17960917 JRNL DOI 10.1021/BI701599E
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.BOANCA,A.SAND,T.OKADA,H.SUZUKI,H.KUMAGAI,K.FUKUYAMA, REMARK 1 AUTH 2 J.J.BARYCKI REMARK 1 TITL AUTOPROCESSING OF HELICOBACTER PYLORI REMARK 1 TITL 2 GAMMA-GLUTAMYLTRANSPEPTIDASE LEADS TO THE FORMATION OF A REMARK 1 TITL 3 THREONINE-THREONINE CATALYTIC DYAD. REMARK 1 REF J.BIOL.CHEM. V. 282 534 2007 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 17107958 REMARK 1 DOI 10.1074/JBC.M607694200
REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 3 NUMBER OF REFLECTIONS : 134438 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 13319 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8423 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.2200 REMARK 3 BIN FREE R VALUE SET COUNT : 918 REMARK 3 BIN FREE R VALUE : 0.2650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8029 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 588 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.29000 REMARK 3 B22 (A**2) : -1.25000 REMARK 3 B33 (A**2) : -0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.098 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.062 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.356 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8248 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11153 ; 1.354 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1067 ; 6.132 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 328 ;37.836 ;25.274 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1434 ;12.449 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;14.798 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1248 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6172 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 4112 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5777 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 561 ; 0.101 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 81 ; 0.188 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 31 ; 0.119 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5413 ; 0.685 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8466 ; 0.993 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3190 ; 1.860 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2687 ; 2.864 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 32 A 122 REMARK 3 ORIGIN FOR THE GROUP (A): 27.2613 14.5949 28.2256 REMARK 3 T TENSOR REMARK 3 T11: -0.1175 T22: -0.0765 REMARK 3 T33: -0.0872 T12: 0.0134 REMARK 3 T13: -0.0234 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 1.0527 L22: 1.0189 REMARK 3 L33: 1.6227 L12: 0.1664 REMARK 3 L13: -0.3904 L23: -0.1839 REMARK 3 S TENSOR REMARK 3 S11: -0.0413 S12: 0.0067 S13: 0.0191 REMARK 3 S21: -0.0624 S22: 0.0179 S23: -0.0202 REMARK 3 S31: -0.1181 S32: 0.0464 S33: 0.0234 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 123 A 196 REMARK 3 ORIGIN FOR THE GROUP (A): 16.9632 19.4276 31.5255 REMARK 3 T TENSOR REMARK 3 T11: -0.0491 T22: -0.0325 REMARK 3 T33: -0.0837 T12: 0.0467 REMARK 3 T13: -0.0208 T23: -0.0255 REMARK 3 L TENSOR REMARK 3 L11: 1.6468 L22: 0.8813 REMARK 3 L33: 1.7277 L12: -0.1220 REMARK 3 L13: -0.0423 L23: -0.3939 REMARK 3 S TENSOR REMARK 3 S11: -0.0438 S12: 0.0103 S13: 0.0619 REMARK 3 S21: -0.0481 S22: 0.0634 S23: 0.0834 REMARK 3 S31: -0.1544 S32: -0.2004 S33: -0.0197 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 197 A 353 REMARK 3 ORIGIN FOR THE GROUP (A): 26.6727 6.2671 32.1227 REMARK 3 T TENSOR REMARK 3 T11: -0.1182 T22: -0.0326 REMARK 3 T33: -0.1156 T12: 0.0054 REMARK 3 T13: 0.0002 T23: 0.0212 REMARK 3 L TENSOR REMARK 3 L11: 0.4863 L22: 1.2730 REMARK 3 L33: 0.8461 L12: -0.1975 REMARK 3 L13: -0.0015 L23: 0.4165 REMARK 3 S TENSOR REMARK 3 S11: -0.0385 S12: -0.0628 S13: 0.0270 REMARK 3 S21: 0.0563 S22: 0.0828 S23: -0.0623 REMARK 3 S31: -0.0058 S32: -0.0014 S33: -0.0443 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 354 A 372 REMARK 3 ORIGIN FOR THE GROUP (A): 26.9733 -21.6063 30.3581 REMARK 3 T TENSOR REMARK 3 T11: 0.0448 T22: -0.0217 REMARK 3 T33: 0.0340 T12: 0.0163 REMARK 3 T13: -0.0069 T23: 0.0405 REMARK 3 L TENSOR REMARK 3 L11: 1.4716 L22: 3.3791 REMARK 3 L33: 2.1573 L12: 0.6407 REMARK 3 L13: -0.9713 L23: 1.2263 REMARK 3 S TENSOR REMARK 3 S11: 0.0463 S12: -0.0179 S13: -0.3407 REMARK 3 S21: 0.1313 S22: -0.0159 S23: -0.4288 REMARK 3 S31: 0.3367 S32: 0.3268 S33: -0.0304 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 380 B 459 REMARK 3 ORIGIN FOR THE GROUP (A): 23.8467 8.2838 33.9731 REMARK 3 T TENSOR REMARK 3 T11: -0.1231 T22: -0.0418 REMARK 3 T33: -0.1062 T12: 0.0202 REMARK 3 T13: -0.0124 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.6396 L22: 0.8623 REMARK 3 L33: 1.1620 L12: -0.1038 REMARK 3 L13: -0.0974 L23: 0.1718 REMARK 3 S TENSOR REMARK 3 S11: -0.0633 S12: -0.1069 S13: -0.0358 REMARK 3 S21: 0.0674 S22: 0.0458 S23: 0.0297 REMARK 3 S31: 0.0415 S32: -0.0461 S33: 0.0176 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 460 B 555 REMARK 3 ORIGIN FOR THE GROUP (A): 23.8427 -4.3162 17.2440 REMARK 3 T TENSOR REMARK 3 T11: -0.0884 T22: -0.0340 REMARK 3 T33: -0.1128 T12: -0.0027 REMARK 3 T13: -0.0193 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.6488 L22: 2.3531 REMARK 3 L33: 1.0524 L12: 0.2227 REMARK 3 L13: 0.0848 L23: 0.0622 REMARK 3 S TENSOR REMARK 3 S11: -0.0660 S12: 0.0752 S13: 0.0078 REMARK 3 S21: -0.1718 S22: 0.1084 S23: 0.0283 REMARK 3 S31: 0.0781 S32: -0.0276 S33: -0.0425 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 556 B 565 REMARK 3 ORIGIN FOR THE GROUP (A): 24.2525 8.1877 11.5234 REMARK 3 T TENSOR REMARK 3 T11: 0.0008 T22: -0.0252 REMARK 3 T33: 0.0006 T12: -0.0003 REMARK 3 T13: -0.0070 T23: 0.0590 REMARK 3 L TENSOR REMARK 3 L11: 19.7244 L22: 8.9714 REMARK 3 L33: 5.4998 L12: 13.2923 REMARK 3 L13: -7.3964 L23: -5.1775 REMARK 3 S TENSOR REMARK 3 S11: -0.0327 S12: 0.5877 S13: 0.7339 REMARK 3 S21: -0.4048 S22: 0.4555 S23: 0.3970 REMARK 3 S31: -0.1144 S32: -0.4376 S33: -0.4227 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 32 C 141 REMARK 3 ORIGIN FOR THE GROUP (A): 9.4834 9.0099 -18.4786 REMARK 3 T TENSOR REMARK 3 T11: -0.0145 T22: -0.0510 REMARK 3 T33: 0.1191 T12: 0.0556 REMARK 3 T13: 0.1054 T23: 0.1048 REMARK 3 L TENSOR REMARK 3 L11: 1.5468 L22: 1.3295 REMARK 3 L33: 1.6235 L12: 0.0197 REMARK 3 L13: -0.3189 L23: -0.0462 REMARK 3 S TENSOR REMARK 3 S11: 0.1963 S12: 0.1410 S13: 0.4036 REMARK 3 S21: 0.1429 S22: -0.0095 S23: 0.1427 REMARK 3 S31: -0.2310 S32: -0.0969 S33: -0.1868 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 142 C 211 REMARK 3 ORIGIN FOR THE GROUP (A): 21.2316 16.8523 -17.2354 REMARK 3 T TENSOR REMARK 3 T11: 0.1517 T22: -0.0269 REMARK 3 T33: 0.1580 T12: 0.0309 REMARK 3 T13: 0.1051 T23: 0.0988 REMARK 3 L TENSOR REMARK 3 L11: 2.5621 L22: 1.8650 REMARK 3 L33: 1.1372 L12: 1.0813 REMARK 3 L13: -0.3994 L23: -0.2441 REMARK 3 S TENSOR REMARK 3 S11: 0.1550 S12: 0.1094 S13: 0.5055 REMARK 3 S21: 0.3712 S22: 0.0114 S23: 0.1245 REMARK 3 S31: -0.2222 S32: 0.1515 S33: -0.1664 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 212 C 349 REMARK 3 ORIGIN FOR THE GROUP (A): 5.4681 -0.2452 -18.8789 REMARK 3 T TENSOR REMARK 3 T11: -0.0691 T22: -0.0052 REMARK 3 T33: 0.0114 T12: 0.0561 REMARK 3 T13: 0.0373 T23: 0.0569 REMARK 3 L TENSOR REMARK 3 L11: 1.1646 L22: 0.9169 REMARK 3 L33: 1.0541 L12: 0.3129 REMARK 3 L13: -0.1435 L23: -0.5280 REMARK 3 S TENSOR REMARK 3 S11: 0.1362 S12: 0.2157 S13: 0.2684 REMARK 3 S21: -0.0065 S22: 0.0844 S23: 0.2182 REMARK 3 S31: -0.0591 S32: -0.1972 S33: -0.2206 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 350 C 379 REMARK 3 ORIGIN FOR THE GROUP (A): 3.5119 -24.3420 -14.3971 REMARK 3 T TENSOR REMARK 3 T11: 0.0509 T22: 0.0112 REMARK 3 T33: 0.0605 T12: -0.0536 REMARK 3 T13: -0.0456 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 3.3710 L22: 1.8111 REMARK 3 L33: 0.3639 L12: -0.5853 REMARK 3 L13: -0.8336 L23: 0.6641 REMARK 3 S TENSOR REMARK 3 S11: 0.1166 S12: -0.0029 S13: -0.1608 REMARK 3 S21: -0.0092 S22: -0.0677 S23: 0.3257 REMARK 3 S31: 0.5092 S32: -0.2253 S33: -0.0489 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 380 D 459 REMARK 3 ORIGIN FOR THE GROUP (A): 10.8535 2.5319 -20.4930 REMARK 3 T TENSOR REMARK 3 T11: -0.0579 T22: -0.0320 REMARK 3 T33: 0.0160 T12: 0.0590 REMARK 3 T13: 0.0608 T23: 0.0802 REMARK 3 L TENSOR REMARK 3 L11: 1.3242 L22: 0.7446 REMARK 3 L33: 1.0636 L12: 0.2101 REMARK 3 L13: -0.2179 L23: -0.5008 REMARK 3 S TENSOR REMARK 3 S11: 0.1541 S12: 0.2057 S13: 0.2507 REMARK 3 S21: 0.0476 S22: 0.0165 S23: 0.1258 REMARK 3 S31: -0.0817 S32: -0.0198 S33: -0.1706 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 460 D 553 REMARK 3 ORIGIN FOR THE GROUP (A): 10.9258 -6.6758 -1.8836 REMARK 3 T TENSOR REMARK 3 T11: -0.0447 T22: -0.0567 REMARK 3 T33: -0.0433 T12: -0.0262 REMARK 3 T13: 0.0242 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 1.3824 L22: 1.3346 REMARK 3 L33: 1.6424 L12: -0.0456 REMARK 3 L13: -0.2192 L23: -0.3216 REMARK 3 S TENSOR REMARK 3 S11: 0.1941 S12: -0.1390 S13: 0.1779 REMARK 3 S21: 0.1306 S22: 0.0115 S23: 0.0488 REMARK 3 S31: -0.0703 S32: -0.0512 S33: -0.2055 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 554 D 565 REMARK 3 ORIGIN FOR THE GROUP (A): 8.1436 7.8058 1.8664 REMARK 3 T TENSOR REMARK 3 T11: 0.1477 T22: 0.1208 REMARK 3 T33: 0.0884 T12: 0.0241 REMARK 3 T13: 0.1057 T23: -0.0766 REMARK 3 L TENSOR REMARK 3 L11: 10.8701 L22: 16.0034 REMARK 3 L33: 0.2538 L12: -12.9556 REMARK 3 L13: -0.8061 L23: 1.2910 REMARK 3 S TENSOR REMARK 3 S11: -0.4905 S12: -0.8450 S13: 0.0490 REMARK 3 S21: 0.4074 S22: 0.4731 S23: -0.0712 REMARK 3 S31: -0.2432 S32: -0.0708 S33: 0.0174 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2QMC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-AUG-07. REMARK 100 THE RCSB ID CODE IS RCSB043778.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 135161 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : 0.06800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.53800 REMARK 200 R SYM FOR SHELL (I) : 0.41300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.590 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2NQO REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM HEPES, 25% PEG MME2000, 5 MG/ML REMARK 280 PROTEIN, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 53.33700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11620 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11420 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 3 REMARK 465 GLY A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 HIS A 12 REMARK 465 SER A 13 REMARK 465 SER A 14 REMARK 465 GLY A 15 REMARK 465 LEU A 16 REMARK 465 VAL A 17 REMARK 465 PRO A 18 REMARK 465 ARG A 19 REMARK 465 GLY A 20 REMARK 465 SER A 21 REMARK 465 HIS A 22 REMARK 465 MET A 23 REMARK 465 ALA A 24 REMARK 465 SER A 25 REMARK 465 ALA A 26 REMARK 465 ALA A 27 REMARK 465 SER A 28 REMARK 465 TYR A 29 REMARK 465 PRO A 30 REMARK 465 PRO A 31 REMARK 465 GLN A 373 REMARK 465 LEU A 374 REMARK 465 HIS A 375 REMARK 465 GLU A 376 REMARK 465 GLY A 377 REMARK 465 SER A 378 REMARK 465 ASN A 379 REMARK 465 GLU B 566 REMARK 465 PHE B 567 REMARK 465 MET C 3 REMARK 465 GLY C 4 REMARK 465 SER C 5 REMARK 465 SER C 6 REMARK 465 HIS C 7 REMARK 465 HIS C 8 REMARK 465 HIS C 9 REMARK 465 HIS C 10 REMARK 465 HIS C 11 REMARK 465 HIS C 12 REMARK 465 SER C 13 REMARK 465 SER C 14 REMARK 465 GLY C 15 REMARK 465 LEU C 16 REMARK 465 VAL C 17 REMARK 465 PRO C 18 REMARK 465 ARG C 19 REMARK 465 GLY C 20 REMARK 465 SER C 21 REMARK 465 HIS C 22 REMARK 465 MET C 23 REMARK 465 ALA C 24 REMARK 465 SER C 25 REMARK 465 ALA C 26 REMARK 465 ALA C 27 REMARK 465 SER C 28 REMARK 465 TYR C 29 REMARK 465 PRO C 30 REMARK 465 PRO C 31 REMARK 465 GLU D 566 REMARK 465 PHE D 567
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 553 CG CD CE NZ REMARK 470 LYS C 154 CG CD CE NZ REMARK 470 LYS D 551 CG CD CE NZ REMARK 470 LYS D 553 CG CD CE NZ
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 79 -47.79 -142.47 REMARK 500 MET A 371 1.89 55.80 REMARK 500 ASN B 400 -108.25 83.71 REMARK 500 ALA B 406 -1.50 71.92 REMARK 500 ASN B 446 -6.48 71.81 REMARK 500 PHE B 465 -50.71 -121.49 REMARK 500 TRP B 507 -62.96 79.35 REMARK 500 ASP B 542 79.89 -160.20 REMARK 500 LYS C 36 -54.66 -121.23 REMARK 500 ALA C 79 -46.72 -144.94 REMARK 500 LYS C 125 -0.78 68.57 REMARK 500 ASN D 400 -106.46 81.85 REMARK 500 ALA D 406 -0.13 69.50 REMARK 500 ASN D 418 47.66 -109.61 REMARK 500 ASN D 446 -11.05 73.83 REMARK 500 TRP D 507 -64.01 76.93 REMARK 500 ASP D 542 80.91 -162.14 REMARK 500 REMARK 500 REMARK: NULL
REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GTB B 1 REMARK 610 GTB D 1
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTB B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTB D 1
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2NQO RELATED DB: PDB REMARK 900 APOENZYME REMARK 900 RELATED ID: 2QM6 RELATED DB: PDB
DBREF 2QMC A 25 379 UNP O25743 O25743_HELPY 25 379 DBREF 2QMC B 380 567 UNP O25743 O25743_HELPY 380 567 DBREF 2QMC C 25 379 UNP O25743 O25743_HELPY 25 379 DBREF 2QMC D 380 567 UNP O25743 O25743_HELPY 380 567
SEQADV 2QMC MET A 3 UNP O25743 EXPRESSION TAG SEQADV 2QMC GLY A 4 UNP O25743 EXPRESSION TAG SEQADV 2QMC SER A 5 UNP O25743 EXPRESSION TAG SEQADV 2QMC SER A 6 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS A 7 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS A 8 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS A 9 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS A 10 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS A 11 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS A 12 UNP O25743 EXPRESSION TAG SEQADV 2QMC SER A 13 UNP O25743 EXPRESSION TAG SEQADV 2QMC SER A 14 UNP O25743 EXPRESSION TAG SEQADV 2QMC GLY A 15 UNP O25743 EXPRESSION TAG SEQADV 2QMC LEU A 16 UNP O25743 EXPRESSION TAG SEQADV 2QMC VAL A 17 UNP O25743 EXPRESSION TAG SEQADV 2QMC PRO A 18 UNP O25743 EXPRESSION TAG SEQADV 2QMC ARG A 19 UNP O25743 EXPRESSION TAG SEQADV 2QMC GLY A 20 UNP O25743 EXPRESSION TAG SEQADV 2QMC SER A 21 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS A 22 UNP O25743 EXPRESSION TAG SEQADV 2QMC MET A 23 UNP O25743 EXPRESSION TAG SEQADV 2QMC ALA A 24 UNP O25743 EXPRESSION TAG SEQADV 2QMC ALA B 380 UNP O25743 THR 380 ENGINEERED SEQADV 2QMC MET C 3 UNP O25743 EXPRESSION TAG SEQADV 2QMC GLY C 4 UNP O25743 EXPRESSION TAG SEQADV 2QMC SER C 5 UNP O25743 EXPRESSION TAG SEQADV 2QMC SER C 6 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS C 7 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS C 8 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS C 9 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS C 10 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS C 11 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS C 12 UNP O25743 EXPRESSION TAG SEQADV 2QMC SER C 13 UNP O25743 EXPRESSION TAG SEQADV 2QMC SER C 14 UNP O25743 EXPRESSION TAG SEQADV 2QMC GLY C 15 UNP O25743 EXPRESSION TAG SEQADV 2QMC LEU C 16 UNP O25743 EXPRESSION TAG SEQADV 2QMC VAL C 17 UNP O25743 EXPRESSION TAG SEQADV 2QMC PRO C 18 UNP O25743 EXPRESSION TAG SEQADV 2QMC ARG C 19 UNP O25743 EXPRESSION TAG SEQADV 2QMC GLY C 20 UNP O25743 EXPRESSION TAG SEQADV 2QMC SER C 21 UNP O25743 EXPRESSION TAG SEQADV 2QMC HIS C 22 UNP O25743 EXPRESSION TAG SEQADV 2QMC MET C 23 UNP O25743 EXPRESSION TAG SEQADV 2QMC ALA C 24 UNP O25743 EXPRESSION TAG SEQADV 2QMC ALA D 380 UNP O25743 THR 380 ENGINEERED
SEQRES 1 A 377 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 377 LEU VAL PRO ARG GLY SER HIS MET ALA SER ALA ALA SER SEQRES 3 A 377 TYR PRO PRO ILE LYS ASN THR LYS VAL GLY LEU ALA LEU SEQRES 4 A 377 SER SER HIS PRO LEU ALA SER GLU ILE GLY GLN LYS VAL SEQRES 5 A 377 LEU GLU GLU GLY GLY ASN ALA ILE ASP ALA ALA VAL ALA SEQRES 6 A 377 ILE GLY PHE ALA LEU ALA VAL VAL HIS PRO ALA ALA GLY SEQRES 7 A 377 ASN ILE GLY GLY GLY GLY PHE ALA VAL ILE HIS LEU ALA SEQRES 8 A 377 ASN GLY GLU ASN VAL ALA LEU ASP PHE ARG GLU LYS ALA SEQRES 9 A 377 PRO LEU LYS ALA THR LYS ASN MET PHE LEU ASP LYS GLN SEQRES 10 A 377 GLY ASN VAL VAL PRO LYS LEU SER GLU ASP GLY TYR LEU SEQRES 11 A 377 ALA ALA GLY VAL PRO GLY THR VAL ALA GLY MET GLU ALA SEQRES 12 A 377 MET LEU LYS LYS TYR GLY THR LYS LYS LEU SER GLN LEU SEQRES 13 A 377 ILE ASP PRO ALA ILE LYS LEU ALA GLU ASN GLY TYR ALA SEQRES 14 A 377 ILE SER GLN ARG GLN ALA GLU THR LEU LYS GLU ALA ARG SEQRES 15 A 377 GLU ARG PHE LEU LYS TYR SER SER SER LYS LYS TYR PHE SEQRES 16 A 377 PHE LYS LYS GLY HIS LEU ASP TYR GLN GLU GLY ASP LEU SEQRES 17 A 377 PHE VAL GLN LYS ASP LEU ALA LYS THR LEU ASN GLN ILE SEQRES 18 A 377 LYS THR LEU GLY ALA LYS GLY PHE TYR GLN GLY GLN VAL SEQRES 19 A 377 ALA GLU LEU ILE GLU LYS ASP MET LYS LYS ASN GLY GLY SEQRES 20 A 377 ILE ILE THR LYS GLU ASP LEU ALA SER TYR ASN VAL LYS SEQRES 21 A 377 TRP ARG LYS PRO VAL VAL GLY SER TYR ARG GLY TYR LYS SEQRES 22 A 377 ILE ILE SER MET SER PRO PRO SER SER GLY GLY THR HIS SEQRES 23 A 377 LEU ILE GLN ILE LEU ASN VAL MET GLU ASN ALA ASP LEU SEQRES 24 A 377 SER ALA LEU GLY TYR GLY ALA SER LYS ASN ILE HIS ILE SEQRES 25 A 377 ALA ALA GLU ALA MET ARG GLN ALA TYR ALA ASP ARG SER SEQRES 26 A 377 VAL TYR MET GLY ASP ALA ASP PHE VAL SER VAL PRO VAL SEQRES 27 A 377 ASP LYS LEU ILE ASN LYS ALA TYR ALA LYS LYS ILE PHE SEQRES 28 A 377 ASP THR ILE GLN PRO ASP THR VAL THR PRO SER SER GLN SEQRES 29 A 377 ILE LYS PRO GLY MET GLY GLN LEU HIS GLU GLY SER ASN SEQRES 1 B 188 ALA THR HIS TYR SER VAL ALA ASP ARG TRP GLY ASN ALA SEQRES 2 B 188 VAL SER VAL THR TYR THR ILE ASN ALA SER TYR GLY SER SEQRES 3 B 188 ALA ALA SER ILE ASP GLY ALA GLY PHE LEU LEU ASN ASN SEQRES 4 B 188 GLU MET ASP ASP PHE SER ILE LYS PRO GLY ASN PRO ASN SEQRES 5 B 188 LEU TYR GLY LEU VAL GLY GLY ASP ALA ASN ALA ILE GLU SEQRES 6 B 188 ALA ASN LYS ARG PRO LEU SER SER MET SER PRO THR ILE SEQRES 7 B 188 VAL LEU LYS ASN ASN LYS VAL PHE LEU VAL VAL GLY SER SEQRES 8 B 188 PRO GLY GLY SER ARG ILE ILE THR THR VAL LEU GLN VAL SEQRES 9 B 188 ILE SER ASN VAL ILE ASP TYR ASN MET ASN ILE SER GLU SEQRES 10 B 188 ALA VAL SER ALA PRO ARG PHE HIS MET GLN TRP LEU PRO SEQRES 11 B 188 ASP GLU LEU ARG ILE GLU LYS PHE GLY MET PRO ALA ASP SEQRES 12 B 188 VAL LYS ASP ASN LEU THR LYS MET GLY TYR GLN ILE VAL SEQRES 13 B 188 THR LYS PRO VAL MET GLY ASP VAL ASN ALA ILE GLN VAL SEQRES 14 B 188 LEU PRO LYS THR LYS GLY SER VAL PHE TYR GLY SER THR SEQRES 15 B 188 ASP PRO ARG LYS GLU PHE SEQRES 1 C 377 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 377 LEU VAL PRO ARG GLY SER HIS MET ALA SER ALA ALA SER SEQRES 3 C 377 TYR PRO PRO ILE LYS ASN THR LYS VAL GLY LEU ALA LEU SEQRES 4 C 377 SER SER HIS PRO LEU ALA SER GLU ILE GLY GLN LYS VAL SEQRES 5 C 377 LEU GLU GLU GLY GLY ASN ALA ILE ASP ALA ALA VAL ALA SEQRES 6 C 377 ILE GLY PHE ALA LEU ALA VAL VAL HIS PRO ALA ALA GLY SEQRES 7 C 377 ASN ILE GLY GLY GLY GLY PHE ALA VAL ILE HIS LEU ALA SEQRES 8 C 377 ASN GLY GLU ASN VAL ALA LEU ASP PHE ARG GLU LYS ALA SEQRES 9 C 377 PRO LEU LYS ALA THR LYS ASN MET PHE LEU ASP LYS GLN SEQRES 10 C 377 GLY ASN VAL VAL PRO LYS LEU SER GLU ASP GLY TYR LEU SEQRES 11 C 377 ALA ALA GLY VAL PRO GLY THR VAL ALA GLY MET GLU ALA SEQRES 12 C 377 MET LEU LYS LYS TYR GLY THR LYS LYS LEU SER GLN LEU SEQRES 13 C 377 ILE ASP PRO ALA ILE LYS LEU ALA GLU ASN GLY TYR ALA SEQRES 14 C 377 ILE SER GLN ARG GLN ALA GLU THR LEU LYS GLU ALA ARG SEQRES 15 C 377 GLU ARG PHE LEU LYS TYR SER SER SER LYS LYS TYR PHE SEQRES 16 C 377 PHE LYS LYS GLY HIS LEU ASP TYR GLN GLU GLY ASP LEU SEQRES 17 C 377 PHE VAL GLN LYS ASP LEU ALA LYS THR LEU ASN GLN ILE SEQRES 18 C 377 LYS THR LEU GLY ALA LYS GLY PHE TYR GLN GLY GLN VAL SEQRES 19 C 377 ALA GLU LEU ILE GLU LYS ASP MET LYS LYS ASN GLY GLY SEQRES 20 C 377 ILE ILE THR LYS GLU ASP LEU ALA SER TYR ASN VAL LYS SEQRES 21 C 377 TRP ARG LYS PRO VAL VAL GLY SER TYR ARG GLY TYR LYS SEQRES 22 C 377 ILE ILE SER MET SER PRO PRO SER SER GLY GLY THR HIS SEQRES 23 C 377 LEU ILE GLN ILE LEU ASN VAL MET GLU ASN ALA ASP LEU SEQRES 24 C 377 SER ALA LEU GLY TYR GLY ALA SER LYS ASN ILE HIS ILE SEQRES 25 C 377 ALA ALA GLU ALA MET ARG GLN ALA TYR ALA ASP ARG SER SEQRES 26 C 377 VAL TYR MET GLY ASP ALA ASP PHE VAL SER VAL PRO VAL SEQRES 27 C 377 ASP LYS LEU ILE ASN LYS ALA TYR ALA LYS LYS ILE PHE SEQRES 28 C 377 ASP THR ILE GLN PRO ASP THR VAL THR PRO SER SER GLN SEQRES 29 C 377 ILE LYS PRO GLY MET GLY GLN LEU HIS GLU GLY SER ASN SEQRES 1 D 188 ALA THR HIS TYR SER VAL ALA ASP ARG TRP GLY ASN ALA SEQRES 2 D 188 VAL SER VAL THR TYR THR ILE ASN ALA SER TYR GLY SER SEQRES 3 D 188 ALA ALA SER ILE ASP GLY ALA GLY PHE LEU LEU ASN ASN SEQRES 4 D 188 GLU MET ASP ASP PHE SER ILE LYS PRO GLY ASN PRO ASN SEQRES 5 D 188 LEU TYR GLY LEU VAL GLY GLY ASP ALA ASN ALA ILE GLU SEQRES 6 D 188 ALA ASN LYS ARG PRO LEU SER SER MET SER PRO THR ILE SEQRES 7 D 188 VAL LEU LYS ASN ASN LYS VAL PHE LEU VAL VAL GLY SER SEQRES 8 D 188 PRO GLY GLY SER ARG ILE ILE THR THR VAL LEU GLN VAL SEQRES 9 D 188 ILE SER ASN VAL ILE ASP TYR ASN MET ASN ILE SER GLU SEQRES 10 D 188 ALA VAL SER ALA PRO ARG PHE HIS MET GLN TRP LEU PRO SEQRES 11 D 188 ASP GLU LEU ARG ILE GLU LYS PHE GLY MET PRO ALA ASP SEQRES 12 D 188 VAL LYS ASP ASN LEU THR LYS MET GLY TYR GLN ILE VAL SEQRES 13 D 188 THR LYS PRO VAL MET GLY ASP VAL ASN ALA ILE GLN VAL SEQRES 14 D 188 LEU PRO LYS THR LYS GLY SER VAL PHE TYR GLY SER THR SEQRES 15 D 188 ASP PRO ARG LYS GLU PHE
HET GTB B 1 15 HET GTB D 1 15
HETNAM GTB S-(P-NITROBENZYL)GLUTATHIONE
FORMUL 5 GTB 2(C17 H22 N4 O8 S) FORMUL 7 HOH *588(H2 O)
HELIX 1 1 HIS A 44 GLU A 57 1 14 HELIX 2 2 ASN A 60 HIS A 76 1 17 HELIX 3 3 GLY A 130 ALA A 134 5 5 HELIX 4 4 GLY A 138 GLY A 151 1 14 HELIX 5 5 LYS A 154 ILE A 159 1 6 HELIX 6 6 ILE A 159 GLY A 169 1 11 HELIX 7 7 SER A 173 LEU A 188 1 16 HELIX 8 8 TYR A 190 PHE A 197 1 8 HELIX 9 9 GLN A 213 GLY A 227 1 15 HELIX 10 10 ALA A 228 GLN A 233 1 6 HELIX 11 11 GLN A 233 ASN A 247 1 15 HELIX 12 12 THR A 252 SER A 258 1 7 HELIX 13 13 SER A 284 GLU A 297 1 14 HELIX 14 14 ASP A 300 GLY A 305 1 6 HELIX 15 15 ALA A 308 MET A 330 1 23 HELIX 16 16 PRO A 339 ILE A 344 1 6 HELIX 17 17 ASN A 345 THR A 355 1 11 HELIX 18 18 PRO A 363 ILE A 367 5 5 HELIX 19 19 LYS A 368 GLY A 372 5 5 HELIX 20 20 ASN B 418 PHE B 423 5 6 HELIX 21 21 GLY B 472 SER B 474 5 3 HELIX 22 22 ARG B 475 ASN B 491 1 17 HELIX 23 23 ASN B 493 ALA B 500 1 8 HELIX 24 24 PRO B 520 GLY B 531 1 12 HELIX 25 25 HIS C 44 GLU C 57 1 14 HELIX 26 26 ASN C 60 HIS C 76 1 17 HELIX 27 27 GLY C 130 ALA C 134 5 5 HELIX 28 28 GLY C 138 GLY C 151 1 14 HELIX 29 29 LYS C 154 GLY C 169 1 16 HELIX 30 30 SER C 173 ALA C 183 1 11 HELIX 31 31 ALA C 183 LEU C 188 1 6 HELIX 32 32 TYR C 190 PHE C 197 1 8 HELIX 33 33 GLN C 213 GLY C 227 1 15 HELIX 34 34 ALA C 228 GLN C 233 1 6 HELIX 35 35 GLN C 233 ASN C 247 1 15 HELIX 36 36 THR C 252 TYR C 259 1 8 HELIX 37 37 SER C 284 GLU C 297 1 14 HELIX 38 38 ASN C 298 ALA C 299 5 2 HELIX 39 39 ASP C 300 LEU C 304 5 5 HELIX 40 40 ALA C 308 MET C 330 1 23 HELIX 41 41 PRO C 339 ILE C 344 1 6 HELIX 42 42 ASN C 345 ILE C 356 1 12 HELIX 43 43 PRO C 363 ILE C 367 5 5 HELIX 44 44 ASN D 418 PHE D 423 5 6 HELIX 45 45 GLY D 472 SER D 474 5 3 HELIX 46 46 ARG D 475 ASN D 491 1 17 HELIX 47 47 ASN D 493 ALA D 500 1 8 HELIX 48 48 PRO D 520 GLY D 531 1 12
SHEET 1 A 7 LYS A 33 ASN A 34 0 SHEET 2 A 7 SER B 555 SER B 560 -1 O PHE B 557 N ASN A 34 SHEET 3 A 7 ALA B 545 PRO B 550 -1 N GLN B 547 O TYR B 558 SHEET 4 A 7 LYS B 463 VAL B 468 -1 N VAL B 467 O ILE B 546 SHEET 5 A 7 THR B 456 LYS B 460 -1 N THR B 456 O VAL B 468 SHEET 6 A 7 TYR A 274 SER A 278 -1 N ILE A 277 O ILE B 457 SHEET 7 A 7 VAL A 267 TYR A 271 -1 N VAL A 267 O SER A 278 SHEET 1 B 6 GLY A 38 LEU A 41 0 SHEET 2 B 6 THR B 381 ASP B 387 -1 O SER B 384 N LEU A 41 SHEET 3 B 6 ALA B 392 THR B 398 -1 O VAL B 395 N TYR B 383 SHEET 4 B 6 GLY A 85 HIS A 91 -1 N GLY A 85 O THR B 398 SHEET 5 B 6 ASN A 97 PHE A 102 -1 O VAL A 98 N ILE A 90 SHEET 6 B 6 LYS A 262 ARG A 264 -1 O LYS A 262 N ASP A 101 SHEET 1 C 2 TYR A 170 ALA A 171 0 SHEET 2 C 2 LEU A 210 PHE A 211 -1 O PHE A 211 N TYR A 170 SHEET 1 D 2 PHE A 198 LYS A 199 0 SHEET 2 D 2 LEU A 203 ASP A 204 -1 O LEU A 203 N LYS A 199 SHEET 1 E 2 LEU B 512 ILE B 514 0 SHEET 2 E 2 ILE B 534 THR B 536 1 O VAL B 535 N ILE B 514 SHEET 1 F 7 LYS C 33 ASN C 34 0 SHEET 2 F 7 SER D 555 SER D 560 -1 O PHE D 557 N ASN C 34 SHEET 3 F 7 ALA D 545 PRO D 550 -1 N GLN D 547 O TYR D 558 SHEET 4 F 7 LYS D 463 VAL D 468 -1 N PHE D 465 O VAL D 548 SHEET 5 F 7 THR D 456 LYS D 460 -1 N THR D 456 O VAL D 468 SHEET 6 F 7 TYR C 274 SER C 278 -1 N LYS C 275 O LEU D 459 SHEET 7 F 7 VAL C 267 TYR C 271 -1 N GLY C 269 O ILE C 276 SHEET 1 G 6 LEU C 39 LEU C 41 0 SHEET 2 G 6 THR D 381 ALA D 386 -1 O SER D 384 N LEU C 41 SHEET 3 G 6 ALA D 392 THR D 398 -1 O VAL D 393 N VAL D 385 SHEET 4 G 6 GLY C 85 HIS C 91 -1 N VAL C 89 O SER D 394 SHEET 5 G 6 ASN C 97 PHE C 102 -1 O LEU C 100 N ALA C 88 SHEET 6 G 6 LYS C 262 ARG C 264 -1 O LYS C 262 N ASP C 101 SHEET 1 H 2 TYR C 170 ALA C 171 0 SHEET 2 H 2 LEU C 210 PHE C 211 -1 O PHE C 211 N TYR C 170 SHEET 1 I 2 PHE C 198 LYS C 199 0 SHEET 2 I 2 LEU C 203 ASP C 204 -1 O LEU C 203 N LYS C 199 SHEET 1 J 2 LEU D 512 ILE D 514 0 SHEET 2 J 2 ILE D 534 THR D 536 1 O VAL D 535 N ILE D 514
CISPEP 1 PRO A 281 PRO A 282 0 15.34 CISPEP 2 LEU B 508 PRO B 509 0 -1.91 CISPEP 3 PRO C 281 PRO C 282 0 11.75 CISPEP 4 LEU D 508 PRO D 509 0 -2.02
SITE 1 AC1 15 ARG A 103 ALA B 380 ASN B 400 ALA B 401 SITE 2 AC1 15 SER B 402 GLU B 419 ASP B 422 TYR B 433 SITE 3 AC1 15 SER B 451 SER B 452 MET B 453 PRO B 471 SITE 4 AC1 15 GLY B 472 GLY B 473 HOH B 601 SITE 1 AC2 15 ARG C 103 ALA D 380 ASN D 400 ALA D 401 SITE 2 AC2 15 SER D 402 GLU D 419 ASP D 422 TYR D 433 SITE 3 AC2 15 SER D 451 SER D 452 MET D 453 PRO D 471 SITE 4 AC2 15 GLY D 472 GLY D 473 HOH D 600
CRYST1 57.140 106.674 87.194 90.00 104.96 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.017501 0.000000 0.004677 0.00000
SCALE2 0.000000 0.009374 0.000000 0.00000
SCALE3 0.000000 0.000000 0.011871 0.00000