10 20 30 40 50 60 70 80 2PV3 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ISOMERASE 09-MAY-07 2PV3
TITLE CRYSTALLOGRAPHIC STRUCTURE OF SURA FRAGMENT LACKING THE SECOND TITLE 2 PEPTIDYL-PROLYL ISOMERASE DOMAIN COMPLEXED WITH PEPTIDE NFTLKFWDIFRK
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHAPERONE SURA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SURVIVIAL PROTEIN A FRAGMENT FROM WHICH THE SECOND COMPND 5 PEPTIDYL-PROLYL ISOMERASE DOMAIN HAS BEEN DELETED; COMPND 6 SYNONYM: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE SURA, PPIASE SURA, COMPND 7 ROTAMASE SURA, SURVIVAL PROTEIN A; COMPND 8 EC: 5.2.1.8; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: C-PEPTIDE; COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 STRAIN: K-12 EMG2; SOURCE 5 GENE: SURA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTYB1; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES
KEYWDS SURVIVAL PROTEIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE DOMAIN, KEYWDS 2 ISOMERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR X.XU,D.B.MCKAY
REVDAT 4 13-JUL-11 2PV3 1 VERSN REVDAT 3 24-FEB-09 2PV3 1 VERSN REVDAT 2 30-OCT-07 2PV3 1 JRNL REVDAT 1 02-OCT-07 2PV3 0
JRNL AUTH X.XU,S.WANG,Y.X.HU,D.B.MCKAY JRNL TITL THE PERIPLASMIC BACTERIAL MOLECULAR CHAPERONE SURA ADAPTS JRNL TITL 2 ITS STRUCTURE TO BIND PEPTIDES IN DIFFERENT CONFORMATIONS TO JRNL TITL 3 ASSERT A SEQUENCE PREFERENCE FOR AROMATIC RESIDUES. JRNL REF J.MOL.BIOL. V. 373 367 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17825319 JRNL DOI 10.1016/J.JMB.2007.07.069
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.BITTO,D.B.MCKAY REMARK 1 TITL CRYSTALLOGRAPHIC STRUCTURE OF SURA, A MOLECULAR CHAPERONE REMARK 1 TITL 2 THAT FACILITATES FOLDING OF OUTER MEMBRANE PORINS REMARK 1 REF STRUCTURE V. 10 1489 2002 REMARK 1 REFN ISSN 0969-2126 REMARK 1 PMID 12429090 REMARK 1 DOI 10.1016/S0969-2126(02)00877-8
REMARK 2 REMARK 2 RESOLUTION. 3.39 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 33271 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.284 REMARK 3 R VALUE (WORKING SET) : 0.284 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1690 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.39 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.48 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2237 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.51 REMARK 3 BIN R VALUE (WORKING SET) : 0.4800 REMARK 3 BIN FREE R VALUE SET COUNT : 143 REMARK 3 BIN FREE R VALUE : 0.4530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4529 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 171.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.20000 REMARK 3 B22 (A**2) : -2.20000 REMARK 3 B33 (A**2) : 3.30000 REMARK 3 B12 (A**2) : -1.10000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.501 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.396 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.328 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.754 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.923 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4650 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4287 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6257 ; 1.280 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9977 ; 0.782 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 579 ; 6.702 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 240 ;39.546 ;25.417 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 879 ;18.735 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;15.901 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 707 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5196 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 853 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1349 ; 0.250 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5048 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2252 ; 0.179 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3011 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 169 ; 0.161 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.022 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 14 ; 0.210 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 35 ; 0.149 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS
REMARK 4 REMARK 4 2PV3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-MAY-07. REMARK 100 THE RCSB ID CODE IS RCSB042805.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-06; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRL; ALS REMARK 200 BEAMLINE : BL11-1; 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.0; 0.9790, 0.9794, 0.9950 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33486 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.390 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.42200 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SNB REMARK 200 STARTING MODEL: PDB ENTRY 1M5Y REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4~1.8M SODIUM CHLORIDE, 0.1M REMARK 280 POTASSIUM DIHYDROGEN PHOSPHATE, 0.1 M SODIUM DIHYDROGEN REMARK 280 PHOSPHATE, 0.1M MES BUFFER, PH6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 125.78667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.89333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.89333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 125.78667 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 6790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 21 REMARK 465 PRO A 22 REMARK 465 GLN A 23 REMARK 465 VAL A 24 REMARK 465 GLY A 209 REMARK 465 ALA A 210 REMARK 465 ARG A 274 REMARK 465 GLY A 275 REMARK 465 GLU A 276 REMARK 465 SER A 277 REMARK 465 LYS A 278 REMARK 465 ASN A 279 REMARK 465 ILE A 280 REMARK 465 SER A 281 REMARK 465 ASN A 428 REMARK 465 ALA B 21 REMARK 465 PRO B 22 REMARK 465 GLN B 23 REMARK 465 VAL B 24 REMARK 465 GLY B 209 REMARK 465 ALA B 210 REMARK 465 ARG B 274 REMARK 465 GLY B 275 REMARK 465 GLU B 276 REMARK 465 SER B 277 REMARK 465 LYS B 278 REMARK 465 ASN B 279 REMARK 465 ILE B 280 REMARK 465 SER B 281 REMARK 465 ASN B 428 REMARK 465 ARG C 11 REMARK 465 LYS C 12
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY B 84 O MET B 87 2.12 REMARK 500 O ASN B 124 OG1 THR B 127 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY B 228 N GLY B 228 CA 0.149 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 33 -124.96 39.70 REMARK 500 ASN A 34 52.91 -96.83 REMARK 500 MET A 46 -33.46 -39.04 REMARK 500 LEU A 51 -74.96 -67.16 REMARK 500 ASN A 52 14.77 -61.61 REMARK 500 ARG A 57 -31.87 78.76 REMARK 500 PRO A 61 -173.15 -63.52 REMARK 500 ASN A 108 51.13 87.63 REMARK 500 MET A 109 -155.16 -133.23 REMARK 500 LEU A 111 -85.28 -48.40 REMARK 500 SER A 116 29.53 -78.20 REMARK 500 ARG A 129 -72.56 -50.38 REMARK 500 GLU A 140 -79.76 -46.87 REMARK 500 VAL A 141 -8.05 -58.10 REMARK 500 ASN A 144 -34.56 -28.09 REMARK 500 ARG A 148 2.84 -57.94 REMARK 500 ASN A 168 73.77 -31.89 REMARK 500 ALA A 170 -91.96 -82.28 REMARK 500 SER A 171 52.32 -100.91 REMARK 500 PRO A 184 -177.03 -63.28 REMARK 500 HIS A 219 -49.63 -158.90 REMARK 500 GLN A 224 52.44 -93.93 REMARK 500 LYS A 252 124.12 -28.66 REMARK 500 ASN A 403 -70.29 -87.80 REMARK 500 ARG A 404 -39.24 -32.16 REMARK 500 GLN A 415 -42.11 -26.59 REMARK 500 SER A 420 57.24 -110.35 REMARK 500 ASN B 33 169.79 48.21 REMARK 500 ASN B 34 77.06 -58.22 REMARK 500 PRO B 61 -167.47 -72.48 REMARK 500 SER B 92 110.40 -28.12 REMARK 500 GLU B 140 -53.66 -25.07 REMARK 500 ASN B 143 -70.73 -61.12 REMARK 500 ASN B 144 -42.19 -28.27 REMARK 500 GLN B 167 -40.10 -167.60 REMARK 500 ASN B 168 72.98 -45.72 REMARK 500 ALA B 170 -93.46 -75.00 REMARK 500 SER B 171 60.68 -102.68 REMARK 500 HIS B 178 115.31 -163.26 REMARK 500 SER B 189 -52.18 -25.61 REMARK 500 ARG B 207 44.23 -100.49 REMARK 500 GLN B 230 118.28 -39.79 REMARK 500 THR B 249 35.84 -91.10 REMARK 500 LYS B 252 141.66 -30.87 REMARK 500 ASN B 271 -32.75 -137.90 REMARK 500 ALA B 410 -73.19 -68.63 REMARK 500 ALA B 411 -34.33 -35.87 REMARK 500 ALA B 421 127.29 -176.62 REMARK 500 LYS C 5 -40.87 -26.49 REMARK 500 ASP C 8 49.64 -57.46 REMARK 500 REMARK 500 REMARK: NULL
DBREF 2PV3 A 21 281 UNP P0ABZ6 SURA_ECOLI 21 281 DBREF 2PV3 A 391 428 UNP P0ABZ6 SURA_ECOLI 391 428 DBREF 2PV3 B 21 281 UNP P0ABZ6 SURA_ECOLI 21 281 DBREF 2PV3 B 391 428 UNP P0ABZ6 SURA_ECOLI 391 428 DBREF 2PV3 C 1 12 PDB 2PV3 2PV3 1 12
SEQRES 1 A 299 ALA PRO GLN VAL VAL ASP LYS VAL ALA ALA VAL VAL ASN SEQRES 2 A 299 ASN GLY VAL VAL LEU GLU SER ASP VAL ASP GLY LEU MET SEQRES 3 A 299 GLN SER VAL LYS LEU ASN ALA ALA GLN ALA ARG GLN GLN SEQRES 4 A 299 LEU PRO ASP ASP ALA THR LEU ARG HIS GLN ILE MET GLU SEQRES 5 A 299 ARG LEU ILE MET ASP GLN ILE ILE LEU GLN MET GLY GLN SEQRES 6 A 299 LYS MET GLY VAL LYS ILE SER ASP GLU GLN LEU ASP GLN SEQRES 7 A 299 ALA ILE ALA ASN ILE ALA LYS GLN ASN ASN MET THR LEU SEQRES 8 A 299 ASP GLN MET ARG SER ARG LEU ALA TYR ASP GLY LEU ASN SEQRES 9 A 299 TYR ASN THR TYR ARG ASN GLN ILE ARG LYS GLU MET ILE SEQRES 10 A 299 ILE SER GLU VAL ARG ASN ASN GLU VAL ARG ARG ARG ILE SEQRES 11 A 299 THR ILE LEU PRO GLN GLU VAL GLU SER LEU ALA GLN GLN SEQRES 12 A 299 VAL GLY ASN GLN ASN ASP ALA SER THR GLU LEU ASN LEU SEQRES 13 A 299 SER HIS ILE LEU ILE PRO LEU PRO GLU ASN PRO THR SER SEQRES 14 A 299 ASP GLN VAL ASN GLU ALA GLU SER GLN ALA ARG ALA ILE SEQRES 15 A 299 VAL ASP GLN ALA ARG ASN GLY ALA ASP PHE GLY LYS LEU SEQRES 16 A 299 ALA ILE ALA HIS SER ALA ASP GLN GLN ALA LEU ASN GLY SEQRES 17 A 299 GLY GLN MET GLY TRP GLY ARG ILE GLN GLU LEU PRO GLY SEQRES 18 A 299 ILE PHE ALA GLN ALA LEU SER THR ALA LYS LYS GLY ASP SEQRES 19 A 299 ILE VAL GLY PRO ILE ARG SER GLY VAL GLY PHE HIS ILE SEQRES 20 A 299 LEU LYS VAL ASN ASP LEU ARG GLY GLU SER LYS ASN ILE SEQRES 21 A 299 SER ALA ALA GLN LYS ASP ARG ALA TYR ARG MET LEU MET SEQRES 22 A 299 ASN ARG LYS PHE SER GLU GLU ALA ALA SER TRP MET GLN SEQRES 23 A 299 GLU GLN ARG ALA SER ALA TYR VAL LYS ILE LEU SER ASN SEQRES 1 B 299 ALA PRO GLN VAL VAL ASP LYS VAL ALA ALA VAL VAL ASN SEQRES 2 B 299 ASN GLY VAL VAL LEU GLU SER ASP VAL ASP GLY LEU MET SEQRES 3 B 299 GLN SER VAL LYS LEU ASN ALA ALA GLN ALA ARG GLN GLN SEQRES 4 B 299 LEU PRO ASP ASP ALA THR LEU ARG HIS GLN ILE MET GLU SEQRES 5 B 299 ARG LEU ILE MET ASP GLN ILE ILE LEU GLN MET GLY GLN SEQRES 6 B 299 LYS MET GLY VAL LYS ILE SER ASP GLU GLN LEU ASP GLN SEQRES 7 B 299 ALA ILE ALA ASN ILE ALA LYS GLN ASN ASN MET THR LEU SEQRES 8 B 299 ASP GLN MET ARG SER ARG LEU ALA TYR ASP GLY LEU ASN SEQRES 9 B 299 TYR ASN THR TYR ARG ASN GLN ILE ARG LYS GLU MET ILE SEQRES 10 B 299 ILE SER GLU VAL ARG ASN ASN GLU VAL ARG ARG ARG ILE SEQRES 11 B 299 THR ILE LEU PRO GLN GLU VAL GLU SER LEU ALA GLN GLN SEQRES 12 B 299 VAL GLY ASN GLN ASN ASP ALA SER THR GLU LEU ASN LEU SEQRES 13 B 299 SER HIS ILE LEU ILE PRO LEU PRO GLU ASN PRO THR SER SEQRES 14 B 299 ASP GLN VAL ASN GLU ALA GLU SER GLN ALA ARG ALA ILE SEQRES 15 B 299 VAL ASP GLN ALA ARG ASN GLY ALA ASP PHE GLY LYS LEU SEQRES 16 B 299 ALA ILE ALA HIS SER ALA ASP GLN GLN ALA LEU ASN GLY SEQRES 17 B 299 GLY GLN MET GLY TRP GLY ARG ILE GLN GLU LEU PRO GLY SEQRES 18 B 299 ILE PHE ALA GLN ALA LEU SER THR ALA LYS LYS GLY ASP SEQRES 19 B 299 ILE VAL GLY PRO ILE ARG SER GLY VAL GLY PHE HIS ILE SEQRES 20 B 299 LEU LYS VAL ASN ASP LEU ARG GLY GLU SER LYS ASN ILE SEQRES 21 B 299 SER ALA ALA GLN LYS ASP ARG ALA TYR ARG MET LEU MET SEQRES 22 B 299 ASN ARG LYS PHE SER GLU GLU ALA ALA SER TRP MET GLN SEQRES 23 B 299 GLU GLN ARG ALA SER ALA TYR VAL LYS ILE LEU SER ASN SEQRES 1 C 12 ASN PHE THR LEU LYS PHE TRP ASP ILE PHE ARG LYS
HELIX 1 1 GLU A 39 GLN A 55 1 17 HELIX 2 2 ASP A 62 MET A 87 1 26 HELIX 3 3 SER A 92 ASN A 107 1 16 HELIX 4 4 THR A 110 ALA A 119 1 10 HELIX 5 5 TYR A 128 ARG A 148 1 21 HELIX 6 6 LEU A 153 GLN A 167 1 15 HELIX 7 7 THR A 188 ARG A 207 1 20 HELIX 8 8 ASP A 211 ALA A 218 1 8 HELIX 9 9 PRO A 240 SER A 248 1 9 HELIX 10 10 ALA A 392 SER A 420 1 29 HELIX 11 11 GLU B 39 ARG B 57 1 19 HELIX 12 12 ASP B 62 MET B 87 1 26 HELIX 13 13 SER B 92 GLN B 106 1 15 HELIX 14 14 THR B 110 GLY B 122 1 13 HELIX 15 15 ASN B 124 ILE B 150 1 27 HELIX 16 16 LEU B 153 GLY B 165 1 13 HELIX 17 17 ASN B 166 ASN B 168 5 3 HELIX 18 18 THR B 188 ARG B 207 1 20 HELIX 19 19 PHE B 212 SER B 220 1 9 HELIX 20 20 GLN B 223 GLY B 228 5 6 HELIX 21 21 PRO B 240 GLN B 245 1 6 HELIX 22 22 ALA B 392 ARG B 418 1 27 HELIX 23 23 PHE C 2 ASP C 8 1 7
SHEET 1 A 3 GLY A 35 LEU A 38 0 SHEET 2 A 3 VAL A 28 VAL A 32 -1 N ALA A 30 O VAL A 37 SHEET 3 A 3 VAL A 423 ILE A 425 -1 O LYS A 424 N VAL A 31 SHEET 1 B 4 GLN A 230 GLY A 234 0 SHEET 2 B 4 LEU A 174 PRO A 182 -1 N LEU A 176 O MET A 231 SHEET 3 B 4 GLY A 264 VAL A 270 -1 O PHE A 265 N ILE A 181 SHEET 4 B 4 ILE A 255 SER A 261 -1 N ILE A 259 O HIS A 266 SHEET 1 C 3 VAL B 36 LEU B 38 0 SHEET 2 C 3 VAL B 28 VAL B 32 -1 N ALA B 30 O VAL B 37 SHEET 3 C 3 VAL B 423 ILE B 425 -1 O LYS B 424 N VAL B 31 SHEET 1 D 4 ILE B 179 PRO B 182 0 SHEET 2 D 4 GLY B 264 ASP B 272 -1 O PHE B 265 N ILE B 181 SHEET 3 D 4 GLU B 173 LEU B 176 -1 N ASN B 175 O ASN B 271 SHEET 4 D 4 GLY B 232 ARG B 235 -1 O GLY B 234 N LEU B 174 SHEET 1 E 3 ILE B 179 PRO B 182 0 SHEET 2 E 3 GLY B 264 ASP B 272 -1 O PHE B 265 N ILE B 181 SHEET 3 E 3 ILE B 255 ARG B 260 -1 N ILE B 259 O HIS B 266
CISPEP 1 GLY A 257 PRO A 258 0 -4.12 CISPEP 2 GLY B 257 PRO B 258 0 5.65
CRYST1 148.330 148.330 188.680 90.00 90.00 120.00 P 32 2 1 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.006742 0.003892 0.000000 0.00000
SCALE2 0.000000 0.007785 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005300 0.00000