10 20 30 40 50 60 70 80 2PKU - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PROTEIN BINDING 18-APR-07 2PKU
TITLE SOLUTION STRUCTURE OF PICK1 PDZ IN COMPLEX WITH THE TITLE 2 CARBOXYL TAIL PEPTIDE OF GLUR2
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRKCA-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PDZ DOMAIN; COMPND 5 SYNONYM: PROTEIN KINASE C-ALPHA-BINDING PROTEIN, PROTEIN COMPND 6 INTERACTING WITH C KINASE 1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PEPTIDE (GLU)(SER)(VAL)(LYS)(ILE); COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED
KEYWDS PROTEIN COMPLEX, PROTEIN BINDING
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR L.PAN,H.WU,C.SHEN,Y.SHI,J.XIA,M.ZHANG
REVDAT 2 24-FEB-09 2PKU 1 VERSN REVDAT 1 20-NOV-07 2PKU 0
JRNL AUTH L.PAN,H.WU,C.SHEN,Y.SHI,W.JIN,J.XIA,M.ZHANG JRNL TITL CLUSTERING AND SYNAPTIC TARGETING OF PICK1 JRNL TITL 2 REQUIRES DIRECT INTERACTION BETWEEN THE PDZ DOMAIN JRNL TITL 3 AND LIPID MEMBRANES JRNL REF EMBO J. V. 26 4576 2007 JRNL REFN ISSN 0261-4189 JRNL PMID 17914463 JRNL DOI 10.1038/SJ.EMBOJ.7601860
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : P.GUNTERT ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2PKU COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-APR-07. REMARK 100 THE RCSB ID CODE IS RCSB042487.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 30 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM 15N, 13C PROTEIN SAMPLE; REMARK 210 50MM PHOSPHATE BUFFER; 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY, 3D_13C-SEPARATED_ REMARK 210 NOESY, 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ, 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TYR A 43 -46.72 179.17 REMARK 500 1 THR A 63 -63.30 -148.03 REMARK 500 1 ALA A 65 -167.06 -172.94 REMARK 500 1 THR A 71 28.96 -150.29 REMARK 500 1 LYS A 79 84.03 -60.97 REMARK 500 1 GLU A 96 97.13 -68.08 REMARK 500 2 PRO A 20 88.29 -68.11 REMARK 500 2 GLN A 42 -76.39 65.85 REMARK 500 2 THR A 63 -55.86 -157.50 REMARK 500 2 ALA A 65 -177.69 -173.72 REMARK 500 2 THR A 71 37.01 -165.70 REMARK 500 3 ALA A 41 -54.15 -153.63 REMARK 500 3 CYS A 44 127.48 -179.44 REMARK 500 3 THR A 63 -66.48 -158.09 REMARK 500 3 ALA A 65 -169.01 -174.69 REMARK 500 3 THR A 71 33.09 -167.44 REMARK 500 3 LYS A 79 82.72 -64.05 REMARK 500 4 GLN A 30 30.25 -98.80 REMARK 500 4 TYR A 43 29.03 -161.21 REMARK 500 4 CYS A 44 75.11 172.56 REMARK 500 4 THR A 63 -66.24 -162.98 REMARK 500 4 ALA A 65 -171.48 -170.56 REMARK 500 4 THR A 71 38.56 -163.93 REMARK 500 4 VAL A 73 116.04 -164.97 REMARK 500 5 ASP A 28 -172.67 -65.06 REMARK 500 5 GLN A 30 30.60 -98.77 REMARK 500 5 ALA A 41 -58.38 -175.80 REMARK 500 5 THR A 63 -46.21 -131.53 REMARK 500 5 ALA A 65 -170.74 -174.79 REMARK 500 5 THR A 71 32.32 -158.63 REMARK 500 6 PRO A 20 99.34 -68.84 REMARK 500 6 ALA A 41 -64.92 -160.76 REMARK 500 6 GLN A 42 -61.81 -90.67 REMARK 500 6 VAL A 50 -64.94 -103.55 REMARK 500 6 THR A 63 -45.75 -157.24 REMARK 500 6 ALA A 65 -166.91 -174.68 REMARK 500 6 ALA A 66 106.17 -56.52 REMARK 500 6 THR A 71 32.65 -141.93 REMARK 500 6 VAL A 73 132.55 -174.66 REMARK 500 7 ALA A 41 -74.81 -168.86 REMARK 500 7 CYS A 44 64.27 177.94 REMARK 500 7 THR A 63 -62.57 -153.46 REMARK 500 7 ALA A 65 -169.13 -163.14 REMARK 500 7 THR A 71 42.26 -163.29 REMARK 500 7 LYS A 79 82.31 -64.07 REMARK 500 7 GLU A 96 97.61 -63.92 REMARK 500 8 ALA A 41 -76.87 -152.84 REMARK 500 8 CYS A 44 79.86 -151.91 REMARK 500 8 VAL A 50 -68.72 -120.34 REMARK 500 8 THR A 63 -66.64 -160.28 REMARK 500 8 ALA A 65 -167.88 -175.90 REMARK 500 8 THR A 71 34.94 -149.01 REMARK 500 8 GLU A 96 91.03 -66.25 REMARK 500 9 ALA A 41 -42.21 -169.77 REMARK 500 9 CYS A 44 78.69 -114.86 REMARK 500 9 ALA A 65 -170.14 -175.48 REMARK 500 9 THR A 71 42.99 -165.55 REMARK 500 9 GLU A 96 96.03 -69.44 REMARK 500 10 ALA A 41 -42.03 -175.37 REMARK 500 10 VAL A 50 -69.30 -120.41 REMARK 500 10 THR A 63 -56.50 -155.16 REMARK 500 10 ALA A 65 -173.07 -175.61 REMARK 500 10 THR A 71 30.77 -147.53 REMARK 500 11 PRO A 20 98.30 -66.39 REMARK 500 11 GLN A 30 31.21 -98.16 REMARK 500 11 ALA A 41 -48.86 -159.31 REMARK 500 11 GLN A 51 -178.29 -173.04 REMARK 500 11 THR A 63 -63.92 -161.99 REMARK 500 11 ALA A 65 -175.33 -175.54 REMARK 500 11 THR A 71 42.73 -160.01 REMARK 500 11 LYS A 79 75.02 -69.00 REMARK 500 12 PRO A 20 107.67 -51.55 REMARK 500 12 ALA A 41 -177.68 -58.00 REMARK 500 12 TYR A 43 -35.26 172.00 REMARK 500 12 THR A 63 -66.00 -155.17 REMARK 500 12 ALA A 65 -169.69 -175.69 REMARK 500 12 THR A 71 31.66 -164.00 REMARK 500 12 VAL A 73 119.88 -162.94 REMARK 500 13 ASP A 28 -170.04 -65.27 REMARK 500 13 GLN A 30 32.42 -98.11 REMARK 500 13 GLN A 42 -69.96 67.40 REMARK 500 13 THR A 63 -60.07 -146.86 REMARK 500 13 ALA A 65 -169.06 -175.96 REMARK 500 13 THR A 71 39.21 -164.74 REMARK 500 14 ALA A 41 -65.23 -175.44 REMARK 500 14 CYS A 44 74.45 -115.98 REMARK 500 14 THR A 63 -62.62 -141.46 REMARK 500 14 ALA A 65 -170.02 -170.91 REMARK 500 14 THR A 71 38.65 -167.44 REMARK 500 14 LYS A 79 82.56 -61.34 REMARK 500 14 VAL A 93 74.86 -66.31 REMARK 500 15 ALA A 41 -41.41 -173.31 REMARK 500 15 THR A 63 -64.45 -144.38 REMARK 500 15 ALA A 65 -167.84 -164.04 REMARK 500 15 THR A 71 34.77 -153.51 REMARK 500 15 GLU A 96 109.78 -59.70 REMARK 500 16 GLN A 42 -75.39 65.07 REMARK 500 16 GLN A 51 -178.95 -172.43 REMARK 500 16 THR A 63 -64.96 -160.70 REMARK 500 16 ALA A 65 -174.40 -176.11 REMARK 500 16 THR A 71 27.66 -153.84 REMARK 500 16 VAL A 73 118.21 -160.50 REMARK 500 16 LYS A 79 83.40 -61.58 REMARK 500 17 PRO A 20 104.90 -51.58 REMARK 500 17 ALA A 41 132.63 -170.22 REMARK 500 17 GLN A 42 -68.97 68.60 REMARK 500 17 CYS A 44 69.09 -153.11 REMARK 500 17 THR A 63 -56.77 -134.90 REMARK 500 17 ALA A 65 -168.01 -175.27 REMARK 500 17 THR A 71 39.90 -161.34 REMARK 500 17 GLU A 96 95.61 -60.21 REMARK 500 18 ALA A 41 -54.52 -175.34 REMARK 500 18 GLN A 42 -62.05 -93.93 REMARK 500 18 THR A 63 -66.90 -154.59 REMARK 500 18 ALA A 65 -170.33 -174.96 REMARK 500 18 THR A 71 43.23 -149.66 REMARK 500 19 ASP A 28 -168.83 -78.47 REMARK 500 19 ALA A 41 -163.87 -162.64 REMARK 500 19 CYS A 44 64.58 -150.63 REMARK 500 19 THR A 63 -47.84 -157.47 REMARK 500 19 ALA A 66 90.96 -57.00 REMARK 500 19 THR A 71 33.37 -168.01 REMARK 500 19 GLU A 96 107.03 -58.84 REMARK 500 20 ASP A 28 -172.98 -64.73 REMARK 500 20 ILE A 35 117.53 -164.13 REMARK 500 20 ALA A 41 160.12 65.54 REMARK 500 20 GLN A 42 -64.97 70.04 REMARK 500 20 CYS A 46 97.01 -56.91 REMARK 500 20 THR A 63 -67.83 -136.20 REMARK 500 20 ALA A 65 -173.48 -175.65 REMARK 500 20 ALA A 66 96.21 -54.48 REMARK 500 20 THR A 71 33.76 -142.90 REMARK 500 20 VAL A 73 113.46 -167.04 REMARK 500 REMARK 500 REMARK: NULL
DBREF 2PKU A 18 104 UNP Q9EP80 PICK1_RAT 18 104 DBREF 2PKU B 121 125 PDB 2PKU 2PKU 121 125
SEQRES 1 A 87 THR VAL PRO GLY LYS VAL THR LEU GLN LYS ASP ALA GLN SEQRES 2 A 87 ASN LEU ILE GLY ILE SER ILE GLY GLY GLY ALA GLN TYR SEQRES 3 A 87 CYS PRO CYS LEU TYR ILE VAL GLN VAL PHE ASP ASN THR SEQRES 4 A 87 PRO ALA ALA LEU ASP GLY THR VAL ALA ALA GLY ASP GLU SEQRES 5 A 87 ILE THR GLY VAL ASN GLY ARG SER ILE LYS GLY LYS THR SEQRES 6 A 87 LYS VAL GLU VAL ALA LYS MET ILE GLN GLU VAL LYS GLY SEQRES 7 A 87 GLU VAL THR ILE HIS TYR ASN LYS LEU SEQRES 1 B 5 GLU SER VAL LYS ILE
HELIX 1 1 THR A 56 GLY A 62 1 7 HELIX 2 2 THR A 82 VAL A 93 1 12
SHEET 1 A 3 VAL A 19 GLN A 26 0 SHEET 2 A 3 GLU A 96 LYS A 103 -1 O ILE A 99 N VAL A 23 SHEET 3 A 3 GLU A 69 VAL A 73 -1 N THR A 71 O HIS A 100 SHEET 1 B 2 ILE A 35 GLY A 38 0 SHEET 2 B 2 TYR A 48 VAL A 52 -1 O GLN A 51 N SER A 36
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000