10 20 30 40 50 60 70 80 2O32 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RNA 30-NOV-06 2O32
TITLE SOLUTION STRUCTURE OF U2 SNRNA STEM I FROM HUMAN, TITLE 2 CONTAINING MODIFIED NUCLEOTIDES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-R(*(PSU)P*CP*UP*CP*(OMG)P*(OMG)P*CP*CP*(PSU) COMPND 3 P*UP*UP*UP*(OMG)P*GP*CP*UP*AP*AP*(OMG)P*A)-3'; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: HUMAN U2 SNRNA STEM I
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES
KEYWDS RNA, WOBBLE BASE-PAIRS, TETRALOOP
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR D.G.SASHITAL,V.VENDITTI,C.G.ANGERS,G.CORNILESCU,S.E.BUTCHER
REVDAT 3 24-FEB-09 2O32 1 VERSN REVDAT 2 29-MAY-07 2O32 1 JRNL REVDAT 1 06-FEB-07 2O32 0
JRNL AUTH D.G.SASHITAL,V.VENDITTI,C.G.ANGERS,G.CORNILESCU, JRNL AUTH 2 S.E.BUTCHER JRNL TITL STRUCTURE AND THERMODYNAMICS OF A CONSERVED U2 JRNL TITL 2 SNRNA DOMAIN FROM YEAST AND HUMAN. JRNL REF RNA V. 13 328 2007 JRNL REFN ISSN 1355-8382 JRNL PMID 17242306 JRNL DOI 10.1261/RNA.418407
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 2.11.0 REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJZNDRA, CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2O32 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JAN-07. REMARK 100 THE RCSB ID CODE IS RCSB040624.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 283; 303 REMARK 210 PH : 7.0; 7.0 REMARK 210 IONIC STRENGTH : 50 MM NACL; 50 MM NACL REMARK 210 PRESSURE : AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM RNA; 50 MM NACL; 90% REMARK 210 H2O, 10% D2O; 0.5 MM RNA; 50 REMARK 210 MM NACL; 99.99% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 2D TOCSY, 2D 13C-1H REMARK 210 HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 MOLECULAR DYNAMICS TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D NOESY, REMARK 210 2D TOCSY, AND NATURAL 13C ABUNDANCE 2D HSQC.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
DBREF 2O32 A 1 20 PDB 2O32 2O32 1 20
SEQRES 1 A 20 PSU C U C OMG OMG C C PSU U U U OMG SEQRES 2 A 20 G C U A A OMG A
MODRES 2O32 PSU A 1 U PSEUDOURIDINE-5'-MONOPHOSPHATE MODRES 2O32 OMG A 5 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 2O32 OMG A 6 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 2O32 PSU A 9 U PSEUDOURIDINE-5'-MONOPHOSPHATE MODRES 2O32 OMG A 13 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 2O32 OMG A 19 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
HET PSU A 1 28 HET OMG A 5 37 HET OMG A 6 37 HET PSU A 9 30 HET OMG A 13 37 HET OMG A 19 37
HETNAM PSU PSEUDOURIDINE-5'-MONOPHOSPHATE HETNAM OMG O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
FORMUL 1 PSU 2(C9 H13 N2 O9 P) FORMUL 1 OMG 4(C11 H16 N5 O8 P)
LINK O3' PSU A 1 P C A 2 1555 1555 1.61 LINK O3' C A 4 P OMG A 5 1555 1555 1.61 LINK O3' OMG A 5 P OMG A 6 1555 1555 1.61 LINK O3' OMG A 6 P C A 7 1555 1555 1.61 LINK O3' C A 8 P PSU A 9 1555 1555 1.61 LINK O3' PSU A 9 P U A 10 1555 1555 1.61 LINK O3' U A 12 P OMG A 13 1555 1555 1.61 LINK O3' OMG A 13 P G A 14 1555 1555 1.61 LINK O3' A A 18 P OMG A 19 1555 1555 1.61 LINK O3' OMG A 19 P A A 20 1555 1555 1.61
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000