10 20 30 40 50 60 70 80 2O10 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER METAL BINDING PROTEIN 28-NOV-06 2O10
TITLE SOLUTION STRUCTURE OF THE N-TERMINAL LIM DOMAIN OF MLP/CRP3
COMPND MOL_ID: 1; COMPND 2 MOLECULE: MUSCLE LIM PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LIM ZINC-BINDING DOMAIN 1, RESIDUES 7-66; COMPND 5 SYNONYM: CYSTEINE AND GLYCINE-RICH PROTEIN 3, CYSTEINE- COMPND 6 RICH PROTEIN 3, CRP3, LIM DOMAIN PROTEIN, CARDIAC; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CSRP3, CLP, MLP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 DE3 PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET24
KEYWDS LIM DOMAIN, ZINC BINDING, CRP, MLP, METAL BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 19
AUTHOR T.SCHALLUS,C.MUHLE-GOLL,C.EDLICH
REVDAT 2 24-FEB-09 2O10 1 VERSN REVDAT 1 11-DEC-07 2O10 0
JRNL AUTH T.SCHALLUS,G.STIER,K.FEHER,C.MUHLE-GOLL JRNL TITL STRUCTURE OF THE MUSCULAR LIM PROTEIN MLP AND ITS JRNL TITL 2 INTERACTION WITH ACTININ JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ZINC COORDINATION FIXED BY EXPLICIT REMARK 3 BONDS AND ANGLES
REMARK 4 REMARK 4 2O10 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-DEC-06. REMARK 100 THE RCSB ID CODE IS RCSB040550.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 295 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 150MM KCL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM N-TERMINAL LIM DOMAIN, REMARK 210 20MM PHOSPHATE BUFFER K, 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 19 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 21 46.06 -142.08 REMARK 500 1 ASN A 26 -75.71 66.77 REMARK 500 1 CYS A 40 -87.43 -100.88 REMARK 500 1 ARG A 41 7.44 174.67 REMARK 500 1 GLU A 53 -82.67 66.85 REMARK 500 2 TYR A 18 -163.53 -111.59 REMARK 500 2 GLU A 21 42.19 -109.28 REMARK 500 2 ASN A 26 -58.00 71.80 REMARK 500 2 CYS A 40 -87.34 -108.81 REMARK 500 2 ARG A 41 16.06 178.93 REMARK 500 2 GLU A 53 -109.22 61.63 REMARK 500 3 ASN A 26 -74.67 66.23 REMARK 500 3 ALA A 39 -65.58 -98.86 REMARK 500 3 GLU A 53 -80.14 61.90 REMARK 500 4 ALA A 12 -59.70 -148.40 REMARK 500 4 GLU A 21 50.50 -144.29 REMARK 500 4 ASN A 26 -68.42 69.17 REMARK 500 4 PHE A 35 78.60 -68.98 REMARK 500 4 CYS A 40 -87.84 -96.10 REMARK 500 4 ARG A 41 20.19 176.50 REMARK 500 4 GLU A 53 -71.78 69.25 REMARK 500 5 ASN A 26 -25.82 70.94 REMARK 500 5 CYS A 40 -90.40 -106.70 REMARK 500 5 ARG A 41 23.58 173.42 REMARK 500 5 GLU A 53 -82.52 69.04 REMARK 500 6 ALA A 8 -168.86 -127.47 REMARK 500 6 ALA A 39 -74.07 -98.53 REMARK 500 6 GLU A 53 -79.52 64.14 REMARK 500 6 SER A 54 26.33 -148.52 REMARK 500 7 TYR A 18 -168.92 -118.16 REMARK 500 7 ASN A 26 -69.69 71.76 REMARK 500 7 CYS A 40 -89.34 -102.13 REMARK 500 7 ARG A 41 21.56 172.03 REMARK 500 7 GLU A 53 -90.10 60.56 REMARK 500 8 ASN A 26 -60.34 70.22 REMARK 500 8 ALA A 39 -73.21 -87.12 REMARK 500 8 CYS A 40 -83.13 -81.02 REMARK 500 8 ARG A 41 16.32 164.18 REMARK 500 8 GLU A 53 -93.04 62.33 REMARK 500 9 ASN A 26 -46.60 72.11 REMARK 500 9 GLU A 53 -69.46 65.34 REMARK 500 10 ASN A 26 -69.23 71.54 REMARK 500 10 CYS A 40 -90.13 -101.15 REMARK 500 10 ARG A 41 8.89 -174.95 REMARK 500 10 ASP A 45 -167.84 -115.68 REMARK 500 10 GLU A 53 -104.07 59.42 REMARK 500 11 ASN A 26 -68.61 69.13 REMARK 500 11 ALA A 39 -64.73 -108.67 REMARK 500 11 GLU A 53 -89.60 55.77 REMARK 500 12 GLU A 21 41.55 -141.32 REMARK 500 12 ASN A 26 -25.25 70.93 REMARK 500 12 CYS A 40 -88.87 -96.94 REMARK 500 12 ARG A 41 24.87 170.46 REMARK 500 12 ASP A 45 -167.10 -116.47 REMARK 500 12 GLU A 53 -83.77 64.39 REMARK 500 13 GLU A 21 44.53 -140.23 REMARK 500 13 ASN A 26 -55.06 72.33 REMARK 500 13 ALA A 39 -74.67 -101.27 REMARK 500 13 GLU A 53 -71.92 67.31 REMARK 500 13 SER A 54 -1.95 -152.38 REMARK 500 14 ALA A 8 -168.92 -114.72 REMARK 500 14 ASN A 26 -74.35 68.52 REMARK 500 14 CYS A 40 -89.42 -100.68 REMARK 500 14 ARG A 41 19.75 174.70 REMARK 500 14 GLU A 53 -78.73 64.45 REMARK 500 15 GLU A 21 45.28 -147.08 REMARK 500 15 ASN A 26 -63.02 69.44 REMARK 500 15 CYS A 40 -90.51 -111.82 REMARK 500 15 ARG A 41 18.35 174.38 REMARK 500 15 GLU A 53 -56.81 70.03 REMARK 500 15 SER A 54 -37.59 -141.44 REMARK 500 16 TYR A 18 -168.35 -125.51 REMARK 500 16 ASN A 26 -58.90 70.58 REMARK 500 16 CYS A 40 -91.83 -105.34 REMARK 500 16 ARG A 41 24.93 174.97 REMARK 500 16 GLU A 53 -54.66 72.89 REMARK 500 16 SER A 54 -26.44 -160.41 REMARK 500 17 GLU A 21 55.22 -159.66 REMARK 500 17 ASN A 26 -47.46 71.55 REMARK 500 17 CYS A 40 -90.36 -114.33 REMARK 500 17 ARG A 41 14.88 177.51 REMARK 500 17 GLU A 53 -65.09 66.08 REMARK 500 18 GLU A 14 30.87 -93.72 REMARK 500 18 GLU A 21 51.66 -162.17 REMARK 500 18 ASN A 26 -69.07 71.81 REMARK 500 18 CYS A 40 -90.25 -99.21 REMARK 500 18 ARG A 41 21.75 173.50 REMARK 500 18 GLU A 53 -126.23 63.75 REMARK 500 19 GLU A 21 44.60 -143.86 REMARK 500 19 ASN A 26 -38.15 71.85 REMARK 500 19 ALA A 39 -75.35 -99.27 REMARK 500 19 GLU A 53 -99.05 59.35 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 87 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 10 SG REMARK 620 2 CYS A 13 SG 107.8 REMARK 620 3 HIS A 31 ND1 108.3 112.0 REMARK 620 4 CYS A 34 SG 110.4 108.2 110.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 86 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 37 SG REMARK 620 2 CYS A 40 SG 107.9 REMARK 620 3 CYS A 58 SG 110.3 110.3 REMARK 620 4 CYS A 61 SG 109.5 109.6 109.1 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 86 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 87
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2O13 RELATED DB: PDB REMARK 900 RELATED ID: 15059 RELATED DB: BMRB
DBREF 2O10 A 7 66 UNP P50461 CSRP3_HUMAN 7 66
SEQRES 1 A 60 GLY ALA LYS CYS GLY ALA CYS GLU LYS THR VAL TYR HIS SEQRES 2 A 60 ALA GLU GLU ILE GLN CYS ASN GLY ARG SER PHE HIS LYS SEQRES 3 A 60 THR CYS PHE HIS CYS MET ALA CYS ARG LYS ALA LEU ASP SEQRES 4 A 60 SER THR THR VAL ALA ALA HIS GLU SER GLU ILE TYR CYS SEQRES 5 A 60 LYS VAL CYS TYR GLY ARG ARG TYR
HET ZN A 86 1 HET ZN A 87 1
HETNAM ZN ZINC ION
FORMUL 2 ZN 2(ZN 2+)
HELIX 1 1 TYR A 18 ALA A 20 5 3 HELIX 2 2 CYS A 58 TYR A 66 1 9
SHEET 1 A 2 ALA A 8 LYS A 9 0 SHEET 2 A 2 THR A 16 VAL A 17 -1 O VAL A 17 N ALA A 8 SHEET 1 B 2 GLU A 22 CYS A 25 0 SHEET 2 B 2 ARG A 28 HIS A 31 -1 O PHE A 30 N ILE A 23 SHEET 1 C 2 ALA A 50 HIS A 52 0 SHEET 2 C 2 GLU A 55 TYR A 57 -1 O TYR A 57 N ALA A 50
LINK SG CYS A 10 ZN ZN A 87 1555 1555 2.29 LINK SG CYS A 13 ZN ZN A 87 1555 1555 2.30 LINK ND1 HIS A 31 ZN ZN A 87 1555 1555 2.02 LINK SG CYS A 34 ZN ZN A 87 1555 1555 2.30 LINK SG CYS A 37 ZN ZN A 86 1555 1555 2.29 LINK SG CYS A 40 ZN ZN A 86 1555 1555 2.29 LINK SG CYS A 58 ZN ZN A 86 1555 1555 2.31 LINK SG CYS A 61 ZN ZN A 86 1555 1555 2.29
SITE 1 AC1 4 CYS A 37 CYS A 40 CYS A 58 CYS A 61 SITE 1 AC2 4 CYS A 10 CYS A 13 HIS A 31 CYS A 34
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000