10 20 30 40 50 60 70 80 2NYT - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 21-NOV-06 2NYT
TITLE THE APOBEC2 CRYSTAL STRUCTURE AND FUNCTIONAL IMPLICATIONS TITLE 2 FOR AID
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE C->U-EDITING ENZYME APOBEC-2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 3.5.4.-; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: APOBEC2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: XA-90; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-KG
KEYWDS CYTIDINE DEAMINASE, ZINC-ION BINDING, APOBEC, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR C.PROCHNOW,R.BRANSTEITTER,M.KLEIN,M.GOODMAN,X.CHEN
REVDAT 5 24-FEB-09 2NYT 1 VERSN REVDAT 4 29-MAY-07 2NYT 1 JRNL REVDAT 3 30-JAN-07 2NYT 1 KEYWDS REVDAT 2 23-JAN-07 2NYT 1 HETATM REVDAT 1 09-JAN-07 2NYT 0
JRNL AUTH C.PROCHNOW,R.BRANSTEITTER,M.G.KLEIN,M.F.GOODMAN, JRNL AUTH 2 X.S.CHEN JRNL TITL THE APOBEC-2 CRYSTAL STRUCTURE AND FUNCTIONAL JRNL TITL 2 IMPLICATIONS FOR THE DEAMINASE AID. JRNL REF NATURE V. 445 447 2007 JRNL REFN ISSN 0028-0836 JRNL PMID 17187054 JRNL DOI 10.1038/NATURE05492
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 24699 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.246 REMARK 3 FREE R VALUE : 0.295 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 50.00 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2456 REMARK 3 BIN FREE R VALUE : 0.2954 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 2243 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5996 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 88 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.02 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2NYT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-NOV-06. REMARK 100 THE RCSB ID CODE IS RCSB040471.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JAN-06; NULL REMARK 200 TEMPERATURE (KELVIN) : 77; NULL REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; NULL REMARK 200 RADIATION SOURCE : ALS; NULL REMARK 200 BEAMLINE : 8.2.1; NULL REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9774, 0.9796, 0.9798; NULL REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL; DOUBLE CRYSTAL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : NULL; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30088 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.15100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 50.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.33300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 85MM NACITRATE, 160MM LISO4, 24% REMARK 280 (WT/VOL) PEG, 15% GLYCEROL, PH 5.6, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291.15K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.92050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 122.88500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.70500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 122.88500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.92050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.70500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 35 REMARK 465 GLY A 197 REMARK 465 GLU A 198 REMARK 465 SER A 199 REMARK 465 LYS A 200 REMARK 465 GLY C 35 REMARK 465 SER C 36 REMARK 465 GLY C 37 REMARK 465 GLY C 38 REMARK 465 GLY C 39 REMARK 465 GLY D 35 REMARK 465 SER D 36 REMARK 465 GLY D 37 REMARK 465 GLY D 38 REMARK 465 GLY D 39 REMARK 465 GLU D 196 REMARK 465 GLY D 197 REMARK 465 GLU D 198 REMARK 465 SER D 199 REMARK 465 LYS D 200 REMARK 465 ALA D 201
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 196 CG CD OE1 OE2 REMARK 470 GLU B 196 CG CD OE1 OE2 REMARK 470 GLU B 198 CG CD OE1 OE2 REMARK 470 SER B 199 OG REMARK 470 LYS B 200 CG CD CE NZ REMARK 470 GLU C 196 CG CD OE1 OE2 REMARK 470 GLU C 198 CG CD OE1 OE2 REMARK 470 SER C 199 OG REMARK 470 LYS C 200 CG CD CE NZ
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 40 -67.13 177.58 REMARK 500 PHE A 54 -70.04 -128.68 REMARK 500 LYS A 79 87.38 -65.39 REMARK 500 GLU A 195 -32.94 -132.34 REMARK 500 GLU A 206 -87.92 -11.29 REMARK 500 ASP A 207 55.77 -119.94 REMARK 500 LYS B 79 85.99 25.44 REMARK 500 THR B 106 -35.38 -138.54 REMARK 500 PRO B 113 -17.74 -48.62 REMARK 500 LYS B 200 137.34 179.88 REMARK 500 ALA B 201 -131.05 -96.61 REMARK 500 PHE C 54 -71.21 -128.37 REMARK 500 LEU C 70 125.37 -170.27 REMARK 500 LYS C 79 86.43 -65.49 REMARK 500 GLU C 198 45.25 76.98 REMARK 500 SER C 199 64.07 -156.46 REMARK 500 GLU C 206 -64.02 -16.74 REMARK 500 ASP C 207 45.54 -107.62 REMARK 500 LEU C 223 -91.20 -52.47 REMARK 500 LYS D 79 86.78 24.95 REMARK 500 THR D 106 -37.00 -138.82 REMARK 500 PRO D 113 -16.93 -49.30 REMARK 500 GLU D 193 93.82 -69.94 REMARK 500 GLN D 203 80.42 -165.61 REMARK 500 GLU D 206 -38.65 -34.96 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A2000 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 98 ND1 REMARK 620 2 GLU A 60 OE1 108.6 REMARK 620 3 CYS A 128 SG 116.8 104.2 REMARK 620 4 CYS A 131 SG 109.1 110.4 107.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B2001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 98 ND1 REMARK 620 2 CYS B 131 SG 113.5 REMARK 620 3 CYS B 128 SG 109.2 99.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C2002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 128 SG REMARK 620 2 GLU C 60 OE1 113.9 REMARK 620 3 HIS C 98 ND1 112.1 109.1 REMARK 620 4 CYS C 131 SG 108.5 113.5 98.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D2003 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 128 SG REMARK 620 2 CYS D 131 SG 94.3 REMARK 620 3 HIS D 98 ND1 116.7 101.7 REMARK 620 N 1 2
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 2000 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 2001 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 2002 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 2003
DBREF 2NYT A 41 224 UNP Q9Y235 ABEC2_HUMAN 41 224 DBREF 2NYT B 41 224 UNP Q9Y235 ABEC2_HUMAN 41 224 DBREF 2NYT C 41 224 UNP Q9Y235 ABEC2_HUMAN 41 224 DBREF 2NYT D 41 224 UNP Q9Y235 ABEC2_HUMAN 41 224
SEQADV 2NYT GLY A 35 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT SER A 36 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY A 37 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY A 38 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY A 39 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT MET A 40 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY B 35 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT SER B 36 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY B 37 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY B 38 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY B 39 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT MET B 40 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY C 35 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT SER C 36 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY C 37 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY C 38 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY C 39 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT MET C 40 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY D 35 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT SER D 36 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY D 37 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY D 38 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT GLY D 39 UNP Q9Y235 CLONING ARTIFACT SEQADV 2NYT MET D 40 UNP Q9Y235 CLONING ARTIFACT
SEQRES 1 A 190 GLY SER GLY GLY GLY MET ILE VAL THR GLY GLU ARG LEU SEQRES 2 A 190 PRO ALA ASN PHE PHE LYS PHE GLN PHE ARG ASN VAL GLU SEQRES 3 A 190 TYR SER SER GLY ARG ASN LYS THR PHE LEU CYS TYR VAL SEQRES 4 A 190 VAL GLU ALA GLN GLY LYS GLY GLY GLN VAL GLN ALA SER SEQRES 5 A 190 ARG GLY TYR LEU GLU ASP GLU HIS ALA ALA ALA HIS ALA SEQRES 6 A 190 GLU GLU ALA PHE PHE ASN THR ILE LEU PRO ALA PHE ASP SEQRES 7 A 190 PRO ALA LEU ARG TYR ASN VAL THR TRP TYR VAL SER SER SEQRES 8 A 190 SER PRO CYS ALA ALA CYS ALA ASP ARG ILE ILE LYS THR SEQRES 9 A 190 LEU SER LYS THR LYS ASN LEU ARG LEU LEU ILE LEU VAL SEQRES 10 A 190 GLY ARG LEU PHE MET TRP GLU GLU PRO GLU ILE GLN ALA SEQRES 11 A 190 ALA LEU LYS LYS LEU LYS GLU ALA GLY CYS LYS LEU ARG SEQRES 12 A 190 ILE MET LYS PRO GLN ASP PHE GLU TYR VAL TRP GLN ASN SEQRES 13 A 190 PHE VAL GLU GLN GLU GLU GLY GLU SER LYS ALA PHE GLN SEQRES 14 A 190 PRO TRP GLU ASP ILE GLN GLU ASN PHE LEU TYR TYR GLU SEQRES 15 A 190 GLU LYS LEU ALA ASP ILE LEU LYS SEQRES 1 B 190 GLY SER GLY GLY GLY MET ILE VAL THR GLY GLU ARG LEU SEQRES 2 B 190 PRO ALA ASN PHE PHE LYS PHE GLN PHE ARG ASN VAL GLU SEQRES 3 B 190 TYR SER SER GLY ARG ASN LYS THR PHE LEU CYS TYR VAL SEQRES 4 B 190 VAL GLU ALA GLN GLY LYS GLY GLY GLN VAL GLN ALA SER SEQRES 5 B 190 ARG GLY TYR LEU GLU ASP GLU HIS ALA ALA ALA HIS ALA SEQRES 6 B 190 GLU GLU ALA PHE PHE ASN THR ILE LEU PRO ALA PHE ASP SEQRES 7 B 190 PRO ALA LEU ARG TYR ASN VAL THR TRP TYR VAL SER SER SEQRES 8 B 190 SER PRO CYS ALA ALA CYS ALA ASP ARG ILE ILE LYS THR SEQRES 9 B 190 LEU SER LYS THR LYS ASN LEU ARG LEU LEU ILE LEU VAL SEQRES 10 B 190 GLY ARG LEU PHE MET TRP GLU GLU PRO GLU ILE GLN ALA SEQRES 11 B 190 ALA LEU LYS LYS LEU LYS GLU ALA GLY CYS LYS LEU ARG SEQRES 12 B 190 ILE MET LYS PRO GLN ASP PHE GLU TYR VAL TRP GLN ASN SEQRES 13 B 190 PHE VAL GLU GLN GLU GLU GLY GLU SER LYS ALA PHE GLN SEQRES 14 B 190 PRO TRP GLU ASP ILE GLN GLU ASN PHE LEU TYR TYR GLU SEQRES 15 B 190 GLU LYS LEU ALA ASP ILE LEU LYS SEQRES 1 C 190 GLY SER GLY GLY GLY MET ILE VAL THR GLY GLU ARG LEU SEQRES 2 C 190 PRO ALA ASN PHE PHE LYS PHE GLN PHE ARG ASN VAL GLU SEQRES 3 C 190 TYR SER SER GLY ARG ASN LYS THR PHE LEU CYS TYR VAL SEQRES 4 C 190 VAL GLU ALA GLN GLY LYS GLY GLY GLN VAL GLN ALA SER SEQRES 5 C 190 ARG GLY TYR LEU GLU ASP GLU HIS ALA ALA ALA HIS ALA SEQRES 6 C 190 GLU GLU ALA PHE PHE ASN THR ILE LEU PRO ALA PHE ASP SEQRES 7 C 190 PRO ALA LEU ARG TYR ASN VAL THR TRP TYR VAL SER SER SEQRES 8 C 190 SER PRO CYS ALA ALA CYS ALA ASP ARG ILE ILE LYS THR SEQRES 9 C 190 LEU SER LYS THR LYS ASN LEU ARG LEU LEU ILE LEU VAL SEQRES 10 C 190 GLY ARG LEU PHE MET TRP GLU GLU PRO GLU ILE GLN ALA SEQRES 11 C 190 ALA LEU LYS LYS LEU LYS GLU ALA GLY CYS LYS LEU ARG SEQRES 12 C 190 ILE MET LYS PRO GLN ASP PHE GLU TYR VAL TRP GLN ASN SEQRES 13 C 190 PHE VAL GLU GLN GLU GLU GLY GLU SER LYS ALA PHE GLN SEQRES 14 C 190 PRO TRP GLU ASP ILE GLN GLU ASN PHE LEU TYR TYR GLU SEQRES 15 C 190 GLU LYS LEU ALA ASP ILE LEU LYS SEQRES 1 D 190 GLY SER GLY GLY GLY MET ILE VAL THR GLY GLU ARG LEU SEQRES 2 D 190 PRO ALA ASN PHE PHE LYS PHE GLN PHE ARG ASN VAL GLU SEQRES 3 D 190 TYR SER SER GLY ARG ASN LYS THR PHE LEU CYS TYR VAL SEQRES 4 D 190 VAL GLU ALA GLN GLY LYS GLY GLY GLN VAL GLN ALA SER SEQRES 5 D 190 ARG GLY TYR LEU GLU ASP GLU HIS ALA ALA ALA HIS ALA SEQRES 6 D 190 GLU GLU ALA PHE PHE ASN THR ILE LEU PRO ALA PHE ASP SEQRES 7 D 190 PRO ALA LEU ARG TYR ASN VAL THR TRP TYR VAL SER SER SEQRES 8 D 190 SER PRO CYS ALA ALA CYS ALA ASP ARG ILE ILE LYS THR SEQRES 9 D 190 LEU SER LYS THR LYS ASN LEU ARG LEU LEU ILE LEU VAL SEQRES 10 D 190 GLY ARG LEU PHE MET TRP GLU GLU PRO GLU ILE GLN ALA SEQRES 11 D 190 ALA LEU LYS LYS LEU LYS GLU ALA GLY CYS LYS LEU ARG SEQRES 12 D 190 ILE MET LYS PRO GLN ASP PHE GLU TYR VAL TRP GLN ASN SEQRES 13 D 190 PHE VAL GLU GLN GLU GLU GLY GLU SER LYS ALA PHE GLN SEQRES 14 D 190 PRO TRP GLU ASP ILE GLN GLU ASN PHE LEU TYR TYR GLU SEQRES 15 D 190 GLU LYS LEU ALA ASP ILE LEU LYS
HET ZN A2000 1 HET ZN B2001 1 HET ZN C2002 1 HET ZN D2003 1
HETNAM ZN ZINC ION
FORMUL 5 ZN 4(ZN 2+) FORMUL 9 HOH *88(H2 O)
HELIX 1 1 LEU A 47 PHE A 54 1 8 HELIX 2 2 HIS A 98 ILE A 107 1 10 HELIX 3 3 CYS A 128 THR A 142 1 15 HELIX 4 4 GLU A 159 ALA A 172 1 14 HELIX 5 5 LYS A 180 VAL A 192 1 13 HELIX 6 6 ASP A 207 LYS A 224 1 18 HELIX 7 7 LEU B 47 PHE B 52 1 6 HELIX 8 8 HIS B 98 ILE B 107 1 10 HELIX 9 9 CYS B 128 THR B 142 1 15 HELIX 10 10 GLU B 159 ALA B 172 1 14 HELIX 11 11 LYS B 180 PHE B 191 1 12 HELIX 12 12 ASP B 207 LYS B 224 1 18 HELIX 13 13 LEU C 47 PHE C 54 1 8 HELIX 14 14 HIS C 98 ILE C 107 1 10 HELIX 15 15 CYS C 128 SER C 140 1 13 HELIX 16 16 GLU C 159 ALA C 172 1 14 HELIX 17 17 LYS C 180 VAL C 192 1 13 HELIX 18 18 ASP C 207 LEU C 223 1 17 HELIX 19 19 LEU D 47 PHE D 52 1 6 HELIX 20 20 HIS D 98 ILE D 107 1 10 HELIX 21 21 CYS D 128 THR D 142 1 15 HELIX 22 22 GLU D 159 ALA D 172 1 14 HELIX 23 23 LYS D 180 PHE D 191 1 12 HELIX 24 24 ASP D 207 LYS D 224 1 18
SHEET 1 A 8 LYS A 175 ILE A 178 0 SHEET 2 A 8 LEU A 145 ARG A 153 1 N VAL A 151 O ARG A 177 SHEET 3 A 8 ARG A 116 SER A 125 1 N TRP A 121 O LEU A 148 SHEET 4 A 8 THR A 68 GLN A 77 -1 N VAL A 73 O THR A 120 SHEET 5 A 8 VAL A 83 ASP A 92 -1 O GLN A 84 N ALA A 76 SHEET 6 A 8 VAL B 83 ALA B 95 -1 O ALA B 85 N TYR A 89 SHEET 7 A 8 ARG B 65 GLN B 77 -1 N ALA B 76 O GLN B 84 SHEET 8 A 8 VAL B 59 SER B 62 -1 N VAL B 59 O LYS B 67 SHEET 1 B10 LYS A 175 ILE A 178 0 SHEET 2 B10 LEU A 145 ARG A 153 1 N VAL A 151 O ARG A 177 SHEET 3 B10 ARG A 116 SER A 125 1 N TRP A 121 O LEU A 148 SHEET 4 B10 THR A 68 GLN A 77 -1 N VAL A 73 O THR A 120 SHEET 5 B10 VAL A 83 ASP A 92 -1 O GLN A 84 N ALA A 76 SHEET 6 B10 VAL B 83 ALA B 95 -1 O ALA B 85 N TYR A 89 SHEET 7 B10 ARG B 65 GLN B 77 -1 N ALA B 76 O GLN B 84 SHEET 8 B10 ARG B 116 SER B 125 -1 O ARG B 116 N GLN B 77 SHEET 9 B10 LEU B 145 ARG B 153 1 O LEU B 148 N TRP B 121 SHEET 10 B10 LYS B 175 ILE B 178 1 O LYS B 175 N ILE B 149 SHEET 1 C 8 LYS C 175 ILE C 178 0 SHEET 2 C 8 LEU C 145 ARG C 153 1 N ILE C 149 O LYS C 175 SHEET 3 C 8 ARG C 116 SER C 125 1 N TRP C 121 O LEU C 148 SHEET 4 C 8 THR C 68 GLN C 77 -1 N VAL C 73 O THR C 120 SHEET 5 C 8 VAL C 83 ASP C 92 -1 O GLN C 84 N ALA C 76 SHEET 6 C 8 VAL D 83 ALA D 95 -1 O GLU D 91 N VAL C 83 SHEET 7 C 8 ARG D 65 GLN D 77 -1 N ALA D 76 O GLN D 84 SHEET 8 C 8 VAL D 59 SER D 62 -1 N SER D 62 O ARG D 65 SHEET 1 D10 LYS C 175 ILE C 178 0 SHEET 2 D10 LEU C 145 ARG C 153 1 N ILE C 149 O LYS C 175 SHEET 3 D10 ARG C 116 SER C 125 1 N TRP C 121 O LEU C 148 SHEET 4 D10 THR C 68 GLN C 77 -1 N VAL C 73 O THR C 120 SHEET 5 D10 VAL C 83 ASP C 92 -1 O GLN C 84 N ALA C 76 SHEET 6 D10 VAL D 83 ALA D 95 -1 O GLU D 91 N VAL C 83 SHEET 7 D10 ARG D 65 GLN D 77 -1 N ALA D 76 O GLN D 84 SHEET 8 D10 ARG D 116 VAL D 123 -1 O ARG D 116 N GLN D 77 SHEET 9 D10 LEU D 145 VAL D 151 1 O LEU D 148 N TRP D 121 SHEET 10 D10 LYS D 175 ILE D 178 1 O LYS D 175 N ILE D 149
LINK ZN ZN A2000 ND1 HIS A 98 1555 1555 2.23 LINK ZN ZN A2000 OE1 GLU A 60 1555 1555 2.31 LINK ZN ZN A2000 SG CYS A 128 1555 1555 2.34 LINK ZN ZN A2000 SG CYS A 131 1555 1555 2.14 LINK ZN ZN B2001 ND1 HIS B 98 1555 1555 2.24 LINK ZN ZN B2001 SG CYS B 131 1555 1555 2.16 LINK ZN ZN B2001 SG CYS B 128 1555 1555 2.52 LINK ZN ZN C2002 SG CYS C 128 1555 1555 2.24 LINK ZN ZN C2002 OE1 GLU C 60 1555 1555 2.12 LINK ZN ZN C2002 ND1 HIS C 98 1555 1555 2.44 LINK ZN ZN C2002 SG CYS C 131 1555 1555 2.27 LINK ZN ZN D2003 SG CYS D 128 1555 1555 2.50 LINK ZN ZN D2003 SG CYS D 131 1555 1555 2.37 LINK ZN ZN D2003 ND1 HIS D 98 1555 1555 2.30
SITE 1 AC1 4 GLU A 60 HIS A 98 CYS A 128 CYS A 131 SITE 1 AC2 3 HIS B 98 CYS B 128 CYS B 131 SITE 1 AC3 4 GLU C 60 HIS C 98 CYS C 128 CYS C 131 SITE 1 AC4 3 HIS D 98 CYS D 128 CYS D 131
CRYST1 37.841 89.410 245.770 90.00 90.00 90.00 P 21 21 21 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.026426 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011184 0.000000 0.00000
SCALE3 0.000000 0.000000 0.004069 0.00000