10 20 30 40 50 60 70 80 2NWT - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 16-NOV-06 2NWT
TITLE NMR STRUCTURE OF PROTEIN UPF0165 PROTEIN AF_2212 FROM TITLE 2 ARCHAEOGLOBUS FULGIDUS; NORTHEAST STRUCTURAL GENOMICS TITLE 3 CONSORTIUM TARGET GR83
COMPND MOL_ID: 1; COMPND 2 MOLECULE: UPF0165 PROTEIN AF_2212; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 STRAIN: XL-10; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET21
KEYWDS HOMO DIMER PROTEIN, GFT NMR, STRUCTURAL GENOMICS, PSI-2, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, NESG, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR K.K.SINGARAPU,D.K.SUKUMARAN,D.PARISH,H.S.ATREYA,G.LIU, AUTHOR 2 A.ELETSKY,C.X.CHEN,M.JIANG,K.CUNNINGHAM,R.XIAO,G.V.T.SWAPNA, AUTHOR 3 T.B.ACTON,B.ROST,G.T.MONTELIONE,T.SZYPERSKI,NORTHEAST AUTHOR 4 STRUCTURAL GENOMICS CONSORTIUM (NESG)
REVDAT 2 24-FEB-09 2NWT 1 VERSN REVDAT 1 30-JAN-07 2NWT 0
JRNL AUTH K.K.SINGARAPU,D.K.SUKUMARAN,D.PARISH,H.S.ATREYA, JRNL AUTH 2 G.LIU,A.ELETSKY,C.X.CHEN,M.JIANG,K.CUNNINGHAM, JRNL AUTH 3 L.C.MA,R.XIAO,J.LIU,M.BARAN,G.V.T.SWAPNA,T.B.ACTON, JRNL AUTH 4 B.ROST,G.T.MONTELIONE,T.SZYPERSKI JRNL TITL NMR STRUCTURE OF PROTEIN Y2212_ARCFU FROM JRNL TITL 2 ARCHAEOGLOBUS FULGIDUS; NORTHEAST STRUCTURAL JRNL TITL 3 GENOMICS CONSORTIUM TARGET GR83 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CNS 1.1 REMARK 3 AUTHORS : GUNTERT ET AL (CYANA), BRUNGET ET AL (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2NWT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-NOV-06. REMARK 100 THE RCSB ID CODE IS RCSB040399.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : 100 MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2 MM PROTEIN Y2212_ARCFU, U REMARK 210 -15N,13C, 5MM CACL, 100MM REMARK 210 NACL, 20MM NH4OAC, 10MM DTT, REMARK 210 0.02%NAN3, 5% D2O, 95% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 4,3D, GFT HNNCABCA, 4,3D, GFT REMARK 210 CABCACONNH, 4,3D, GFT HCCH REMARK 210 COSY, 3D, 15N-13C RESOLVED REMARK 210 SIMULTANIOUS NOESY, 3D, 15N, REMARK 210 13C RESOLVED X-FILTERED NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.3, DYANA 1.5 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 20 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING RECENTLY DEVELOPED REMARK 210 HIGH THROUGHPUT NMR STRUCTURE DETERMINATION PROTOCOL.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 22 -158.65 -127.11 REMARK 500 1 PRO A 44 -174.87 -69.15 REMARK 500 1 LYS A 52 104.73 61.16 REMARK 500 1 LEU A 62 -171.67 62.18 REMARK 500 1 HIS A 65 -159.02 58.09 REMARK 500 1 PRO B 2 88.17 -69.62 REMARK 500 1 PRO B 16 168.96 -44.93 REMARK 500 1 GLN B 18 148.38 85.53 REMARK 500 1 VAL B 36 161.65 61.53 REMARK 500 1 PRO B 38 -166.48 -75.25 REMARK 500 1 LEU B 62 84.85 45.99 REMARK 500 1 HIS B 64 31.65 -142.87 REMARK 500 2 ASN A 11 45.13 -67.21 REMARK 500 2 LEU A 34 -161.57 56.42 REMARK 500 2 ASP A 40 -158.88 56.24 REMARK 500 2 GLU A 48 -36.77 -144.73 REMARK 500 2 MET A 59 161.92 75.16 REMARK 500 2 LEU A 62 137.06 69.57 REMARK 500 2 LYS B 23 157.77 77.17 REMARK 500 2 ILE B 53 86.34 57.25 REMARK 500 2 ARG B 54 94.49 70.68 REMARK 500 2 SER B 60 128.62 75.73 REMARK 500 2 LEU B 62 83.72 53.35 REMARK 500 2 HIS B 64 35.04 -85.72 REMARK 500 3 PRO A 38 -154.12 -90.71 REMARK 500 3 HIS A 67 -55.87 -124.47 REMARK 500 3 HIS A 68 -24.07 -142.62 REMARK 500 3 ASN B 11 61.28 -66.86 REMARK 500 3 ILE B 53 102.42 54.85 REMARK 500 3 THR B 57 145.49 72.09 REMARK 500 3 LEU B 62 179.11 61.48 REMARK 500 3 HIS B 67 -103.96 -87.13 REMARK 500 3 HIS B 68 146.84 156.65 REMARK 500 4 PRO A 2 44.83 -74.22 REMARK 500 4 PRO A 38 -166.85 -79.88 REMARK 500 4 ILE A 53 100.77 73.65 REMARK 500 4 HIS A 68 -91.43 -174.96 REMARK 500 4 LYS B 19 167.71 55.65 REMARK 500 4 LYS B 23 -163.07 33.95 REMARK 500 4 LEU B 62 103.64 54.86 REMARK 500 4 HIS B 66 77.19 -160.27 REMARK 500 5 LEU A 17 -66.43 -93.06 REMARK 500 5 THR A 57 145.25 69.89 REMARK 500 5 LEU A 62 82.64 50.45 REMARK 500 5 HIS A 64 69.34 62.14 REMARK 500 5 HIS A 65 36.44 -88.20 REMARK 500 5 LYS B 19 123.17 34.27 REMARK 500 5 LEU B 22 -161.97 -110.81 REMARK 500 5 LEU B 34 -150.39 -98.08 REMARK 500 5 PRO B 44 -162.58 -67.18 REMARK 500 5 GLU B 48 -169.40 -126.61 REMARK 500 5 SER B 60 121.01 67.52 REMARK 500 5 LEU B 62 79.74 52.45 REMARK 500 5 HIS B 67 -156.34 -77.56 REMARK 500 6 PRO A 38 -175.16 -66.35 REMARK 500 6 VAL A 47 3.20 -150.66 REMARK 500 6 LEU B 22 -166.23 -78.59 REMARK 500 6 LEU B 41 112.44 68.37 REMARK 500 6 LEU B 62 111.02 46.63 REMARK 500 7 PRO A 16 169.79 -46.18 REMARK 500 7 GLN A 18 143.21 77.11 REMARK 500 7 VAL A 47 139.66 68.37 REMARK 500 7 LYS A 52 -150.24 -105.63 REMARK 500 7 ILE A 53 98.87 76.20 REMARK 500 7 HIS A 66 90.05 -160.78 REMARK 500 7 LEU B 17 -74.69 -83.53 REMARK 500 7 PRO B 38 -156.05 -71.73 REMARK 500 8 PRO A 2 99.55 -58.47 REMARK 500 8 LEU A 17 -68.50 -92.21 REMARK 500 8 LYS A 35 -137.40 -128.33 REMARK 500 8 PRO A 38 -169.46 -65.53 REMARK 500 8 ASP A 40 -153.70 -103.09 REMARK 500 8 SER A 60 109.34 62.05 REMARK 500 8 GLN B 18 -119.80 43.05 REMARK 500 8 LYS B 19 -128.05 69.01 REMARK 500 8 VAL B 20 171.72 68.82 REMARK 500 8 LEU B 62 -169.16 66.33 REMARK 500 9 LEU A 34 -166.16 -106.61 REMARK 500 9 PRO A 38 -165.88 -75.93 REMARK 500 9 LYS A 52 157.83 65.20 REMARK 500 9 LEU A 62 106.96 63.74 REMARK 500 9 LEU B 62 -166.27 61.17 REMARK 500 9 HIS B 64 110.21 -168.00 REMARK 500 9 HIS B 67 159.14 178.38 REMARK 500 9 HIS B 68 -99.92 -130.65 REMARK 500 10 PRO A 16 168.68 -47.14 REMARK 500 10 GLN A 18 149.15 81.58 REMARK 500 10 ASP A 55 -172.46 73.18 REMARK 500 10 LEU A 62 174.97 66.60 REMARK 500 10 GLU A 63 -167.51 -126.00 REMARK 500 10 HIS A 65 95.56 62.46 REMARK 500 10 PRO B 16 170.55 -58.37 REMARK 500 10 GLN B 18 6.89 85.44 REMARK 500 10 LYS B 19 -159.75 53.56 REMARK 500 10 PRO B 38 -154.24 -72.93 REMARK 500 10 ILE B 39 161.98 74.32 REMARK 500 10 HIS B 68 -168.71 -115.60 REMARK 500 11 VAL A 36 149.53 65.70 REMARK 500 11 HIS A 68 125.42 71.31 REMARK 500 11 GLU B 63 92.60 -63.84 REMARK 500 12 LEU A 17 -71.88 -80.52 REMARK 500 12 VAL A 20 142.95 61.10 REMARK 500 12 ASP A 21 14.74 -145.92 REMARK 500 12 LYS A 23 163.74 81.85 REMARK 500 12 SER A 60 83.85 61.78 REMARK 500 12 HIS A 65 101.94 71.40 REMARK 500 12 PRO B 2 97.50 -62.19 REMARK 500 12 ASN B 11 62.82 -65.15 REMARK 500 12 SER B 46 -164.54 -122.62 REMARK 500 12 VAL B 47 137.74 77.28 REMARK 500 12 LEU B 62 -176.42 55.66 REMARK 500 12 HIS B 68 -75.08 -75.53 REMARK 500 13 PRO A 38 174.30 -56.25 REMARK 500 13 ILE A 53 130.50 73.27 REMARK 500 13 PRO B 2 99.77 -67.15 REMARK 500 13 PRO B 38 171.87 -58.65 REMARK 500 13 ASP B 55 153.68 71.02 REMARK 500 13 LEU B 62 -165.74 62.90 REMARK 500 14 PRO A 16 168.38 -39.83 REMARK 500 14 GLN A 18 -176.11 77.66 REMARK 500 14 LEU A 34 157.97 51.47 REMARK 500 14 ASP A 40 72.04 -152.67 REMARK 500 14 LYS A 52 104.75 60.19 REMARK 500 14 HIS A 66 -50.50 -139.94 REMARK 500 14 PRO B 2 103.45 -55.12 REMARK 500 14 ASP B 40 -151.57 -93.40 REMARK 500 14 ARG B 54 147.98 63.43 REMARK 500 14 HIS B 64 58.22 -98.81 REMARK 500 15 LYS A 23 171.99 85.14 REMARK 500 15 VAL A 47 154.33 64.57 REMARK 500 15 GLU A 48 -36.70 66.27 REMARK 500 15 LYS A 52 103.03 61.58 REMARK 500 15 LEU A 62 97.49 -69.74 REMARK 500 15 HIS A 65 92.10 -69.72 REMARK 500 15 HIS A 68 122.99 -175.62 REMARK 500 15 LEU B 62 -171.23 59.01 REMARK 500 15 HIS B 67 157.61 72.16 REMARK 500 16 PRO A 38 -160.61 -77.79 REMARK 500 16 HIS A 66 69.37 73.14 REMARK 500 16 LEU B 41 116.90 68.80 REMARK 500 16 TRP B 58 -168.77 -110.56 REMARK 500 16 MET B 59 172.42 73.64 REMARK 500 16 LEU B 62 99.89 45.43 REMARK 500 17 ASN A 11 49.75 -67.44 REMARK 500 17 LYS A 52 149.61 -173.69 REMARK 500 17 ILE A 53 104.57 58.98 REMARK 500 17 LEU A 62 79.56 38.69 REMARK 500 17 PRO B 2 109.91 -46.74 REMARK 500 17 ILE B 39 148.76 69.27 REMARK 500 17 ASP B 40 -69.65 -155.40 REMARK 500 17 LEU B 62 84.58 39.70 REMARK 500 18 GLN A 18 -134.05 75.10 REMARK 500 18 LYS A 19 -161.25 59.07 REMARK 500 18 VAL A 20 147.95 67.01 REMARK 500 18 LEU A 22 174.81 -56.85 REMARK 500 18 GLU A 37 84.23 41.83 REMARK 500 18 LEU A 62 -163.95 57.91 REMARK 500 18 ASN B 11 63.45 -65.70 REMARK 500 18 VAL B 36 143.34 65.73 REMARK 500 18 ILE B 53 112.39 70.11 REMARK 500 19 ASN A 11 67.43 -63.78 REMARK 500 19 LEU A 17 -67.40 -109.30 REMARK 500 19 ASP A 21 15.21 -152.42 REMARK 500 19 LEU A 22 -169.91 -122.50 REMARK 500 19 LEU A 34 -164.90 -101.48 REMARK 500 19 ILE A 53 -158.34 -105.53 REMARK 500 19 LEU A 62 -171.03 60.22 REMARK 500 19 HIS A 64 -17.94 72.95 REMARK 500 19 HIS A 65 -178.08 68.74 REMARK 500 19 ASN B 11 55.20 -65.55 REMARK 500 19 PRO B 16 169.73 -43.56 REMARK 500 19 GLN B 18 178.58 79.38 REMARK 500 19 LEU B 22 -169.95 -129.99 REMARK 500 19 PRO B 44 -159.57 -87.00 REMARK 500 19 LYS B 51 -154.84 -111.71 REMARK 500 19 LYS B 52 117.74 60.31 REMARK 500 19 THR B 57 148.40 70.00 REMARK 500 19 SER B 60 137.23 74.91 REMARK 500 19 LEU B 62 179.05 67.96 REMARK 500 19 HIS B 68 -74.83 -73.68 REMARK 500 20 LEU A 34 -166.00 55.23 REMARK 500 20 LEU A 62 142.12 60.10 REMARK 500 20 HIS A 65 126.54 71.91 REMARK 500 20 HIS A 67 121.53 74.84 REMARK 500 20 ASN B 11 52.64 -65.33 REMARK 500 20 LEU B 17 -66.03 -96.72 REMARK 500 20 ARG B 54 -166.73 55.63 REMARK 500 20 SER B 60 -0.58 74.26 REMARK 500 20 HIS B 68 97.52 -179.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 10 ASN A 11 5 -149.48 REMARK 500 ASN A 11 GLY A 12 5 149.19 REMARK 500 GLN B 18 LYS B 19 8 -143.29 REMARK 500 GLN A 18 LYS A 19 18 -141.77 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GR83 RELATED DB: TARGETDB
DBREF 2NWT A 1 61 UNP O28071 Y2212_ARCFU 1 61 DBREF 2NWT B 1 61 UNP O28071 Y2212_ARCFU 1 61
SEQADV 2NWT LEU A 62 UNP O28071 CLONING ARTIFACT SEQADV 2NWT GLU A 63 UNP O28071 CLONING ARTIFACT SEQADV 2NWT HIS A 64 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS A 65 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS A 66 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS A 67 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS A 68 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS A 69 UNP O28071 EXPRESSION TAG SEQADV 2NWT LEU B 62 UNP O28071 CLONING ARTIFACT SEQADV 2NWT GLU B 63 UNP O28071 CLONING ARTIFACT SEQADV 2NWT HIS B 64 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS B 65 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS B 66 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS B 67 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS B 68 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS B 69 UNP O28071 EXPRESSION TAG
SEQRES 1 A 69 MET PRO LYS ILE ILE GLU ALA VAL TYR GLU ASN GLY VAL SEQRES 2 A 69 PHE LYS PRO LEU GLN LYS VAL ASP LEU LYS GLU GLY GLU SEQRES 3 A 69 ARG VAL LYS ILE LYS LEU GLU LEU LYS VAL GLU PRO ILE SEQRES 4 A 69 ASP LEU GLY GLU PRO VAL SER VAL GLU GLU ILE LYS LYS SEQRES 5 A 69 ILE ARG ASP GLY THR TRP MET SER SER LEU GLU HIS HIS SEQRES 6 A 69 HIS HIS HIS HIS SEQRES 1 B 69 MET PRO LYS ILE ILE GLU ALA VAL TYR GLU ASN GLY VAL SEQRES 2 B 69 PHE LYS PRO LEU GLN LYS VAL ASP LEU LYS GLU GLY GLU SEQRES 3 B 69 ARG VAL LYS ILE LYS LEU GLU LEU LYS VAL GLU PRO ILE SEQRES 4 B 69 ASP LEU GLY GLU PRO VAL SER VAL GLU GLU ILE LYS LYS SEQRES 5 B 69 ILE ARG ASP GLY THR TRP MET SER SER LEU GLU HIS HIS SEQRES 6 B 69 HIS HIS HIS HIS
HELIX 1 1 GLU A 48 LYS A 52 5 5
SHEET 1 A 7 ILE A 5 GLU A 10 0 SHEET 2 A 7 VAL A 13 PRO A 16 -1 O LYS A 15 N VAL A 8 SHEET 3 A 7 VAL B 13 LEU B 17 -1 O PHE B 14 N PHE A 14 SHEET 4 A 7 GLU B 6 GLU B 10 -1 N VAL B 8 O LYS B 15 SHEET 5 A 7 VAL A 28 LYS A 31 -1 N VAL A 28 O ALA B 7 SHEET 6 A 7 GLU B 26 LEU B 32 -1 O LYS B 29 N LYS A 31 SHEET 7 A 7 ILE A 5 GLU A 10 -1 N ILE A 5 O ILE B 30
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000