10 20 30 40 50 60 70 80 2NCO - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER METAL BINDING PROTEIN 11-APR-16 2NCO
TITLE NMR SOLUTION STRUCTURE FOR THE C-TERMINAL DOMAIN OF TETRAHYMENA TCB2 TITLE 2 IN THE ABSENCE OF CALCIUM
COMPND MOL_ID: 1; COMPND 2 MOLECULE: 25 KDA CALCIUM-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: EF-HANDS 3 AND 4, RESIDUES 117-218; COMPND 5 SYNONYM: TCBP-25, 10 KDA CALCIUM-BINDING PROTEIN, TCBP-10; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TETRAHYMENA THERMOPHILA; SOURCE 3 ORGANISM_TAXID: 5911; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PJ411
KEYWDS CALCIUM BINDING PROTEIN, EF HAND, CONTRACTILITY, HELICAL PACKING, KEYWDS 2 CYTOSKELETON, TCB25, METAL BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR A.FOWLER,A.M.KILPATRICK
REVDAT 2 02-NOV-16 2NCO 1 JRNL REVDAT 1 17-AUG-16 2NCO 0
JRNL AUTH A.M.KILPATRICK,J.E.HONTS,H.M.SLEISTER,C.A.FOWLER JRNL TITL SOLUTION NMR STRUCTURES OF THE C-DOMAIN OF TETRAHYMENA JRNL TITL 2 CYTOSKELETAL PROTEIN TCB2 REVEAL DISTINCT CALCIUM-INDUCED JRNL TITL 3 STRUCTURAL REARRANGEMENTS. JRNL REF PROTEINS V. 84 1748 2016 JRNL REFN ISSN 0887-3585 JRNL PMID 27488393 JRNL DOI 10.1002/PROT.25111
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.M.KILPATRICK,T.E.GURROLA,R.C.STERNER,H.M.SLEISTER, REMARK 1 AUTH 2 J.E.HONTS,C.A.FOWLER REMARK 1 TITL BACKBONE AND SIDE-CHAIN CHEMICAL SHIFT ASSIGNMENTS FOR THE REMARK 1 TITL 2 C-TERMINAL DOMAIN OF TCB2, A CYTOSKELETAL CALCIUM-BINDING REMARK 1 TITL 3 PROTEIN FROM TETRAHYMENA THERMOPHILA. REMARK 1 REF BIOMOL.NMR ASSIGN. 2016 REMARK 1 REFN ESSN 1874-270X REMARK 1 PMID 27155947 REMARK 1 DOI 10.1007/S12104-016-9684-9
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2NCO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-APR-16. REMARK 100 THE RCSB ID CODE IS RCSB104698.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 0.05 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.75 MM [U-98% 13C; U-98% 15N] REMARK 210 TCB2-C, 25 MM TRIS, 50 MM REMARK 210 POTASSIUM CHLORIDE, 5 MM REMARK 210 MAGNESIUM CHLORIDE, 1 MM EGTA, REMARK 210 90% H2O/10% D2O; 0.75 MM [U-98% REMARK 210 13C; U-98% 15N] TCB2-C, 25 MM REMARK 210 TRIS, 50 MM POTASSIUM CHLORIDE, 5 REMARK 210 MM MAGNESIUM CHLORIDE, 1 MM EGTA, REMARK 210 100% D2O; 0.75 MM [U-98% 15N] REMARK 210 TCB2-C, 25 MM TRIS, 50 MM REMARK 210 POTASSIUM CHLORIDE, 5 MM REMARK 210 MAGNESIUM CHLORIDE, 1 MM EGTA, REMARK 210 90% H2O/10% D2O; 0.75 MM TCB2-C, REMARK 210 25 MM TRIS, 50 MM POTASSIUM REMARK 210 CHLORIDE, 5 MM MAGNESIUM REMARK 210 CHLORIDE, 1 MM EGTA, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HNCO; 3D C(CO)NH; REMARK 210 3D H(CCO)NH; 2D 1H-13C HMQC; 3D REMARK 210 HCCH-TOCSY; 3D 1H-13C NOESY; 3D REMARK 210 1H-15N NOESY; 2D 1H-1H COSY; 2D REMARK 210 1H-1H TOCSY; 2D 1H-1H NOESY; 2D REMARK 210 (HB)CB(CGCD)HD; 2D (HB)CB(CGCDCE) REMARK 210 HE REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, VNMRJ, ANALYSIS, CYANA REMARK 210 2.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 120 80.27 -69.75 REMARK 500 1 ASN A 123 160.20 -49.54 REMARK 500 1 ASP A 141 102.31 -53.54 REMARK 500 1 ASP A 184 45.96 -91.39 REMARK 500 1 ASN A 186 107.40 -51.67 REMARK 500 2 PRO A 120 82.87 -69.73 REMARK 500 2 ASN A 123 160.65 -49.67 REMARK 500 2 ASP A 141 92.59 -65.82 REMARK 500 2 ASP A 184 45.77 -91.66 REMARK 500 2 ASN A 186 106.46 -51.96 REMARK 500 3 ASN A 123 160.24 -49.36 REMARK 500 3 ASP A 141 101.16 -55.20 REMARK 500 3 ASP A 184 45.87 -91.39 REMARK 500 3 ASN A 186 108.43 -51.91 REMARK 500 4 PRO A 120 82.07 -69.76 REMARK 500 4 ASN A 123 160.05 -49.89 REMARK 500 4 ASP A 184 45.90 -91.32 REMARK 500 4 ASN A 186 106.60 -51.68 REMARK 500 5 ASN A 123 160.60 -49.90 REMARK 500 5 ASP A 184 45.66 -91.81 REMARK 500 5 SER A 187 77.12 -102.91 REMARK 500 6 SER A 118 124.22 -172.29 REMARK 500 6 PRO A 120 83.58 -69.71 REMARK 500 6 ASN A 123 160.12 -49.82 REMARK 500 6 ASP A 184 46.09 -90.61 REMARK 500 6 ASN A 186 103.47 -51.43 REMARK 500 6 SER A 187 -169.77 -127.44 REMARK 500 7 ASN A 123 160.18 -49.47 REMARK 500 7 ASP A 141 95.68 -64.66 REMARK 500 7 ASP A 184 45.81 -92.18 REMARK 500 7 ASP A 188 -57.04 -135.27 REMARK 500 8 ASN A 123 160.99 -49.48 REMARK 500 8 ASP A 141 105.34 -54.94 REMARK 500 8 THR A 185 100.55 -55.62 REMARK 500 8 ASP A 188 -51.56 -126.15 REMARK 500 9 PRO A 120 98.86 -69.74 REMARK 500 9 ASP A 184 46.15 -90.89 REMARK 500 9 SER A 215 107.97 -160.97 REMARK 500 10 PRO A 120 96.95 -69.72 REMARK 500 10 ASP A 141 102.21 -53.65 REMARK 500 10 ASP A 184 46.07 -90.76 REMARK 500 10 ASN A 186 108.53 -51.58 REMARK 500 11 ASN A 123 160.78 -49.56 REMARK 500 11 ASP A 141 92.37 -64.81 REMARK 500 11 ASP A 184 45.75 -91.96 REMARK 500 11 ASP A 188 -71.96 -131.70 REMARK 500 11 ILE A 209 105.18 -53.79 REMARK 500 12 PRO A 120 79.31 -69.78 REMARK 500 12 ASP A 141 101.31 -57.16 REMARK 500 12 SER A 190 142.93 -170.14 REMARK 500 REMARK 500 THIS ENTRY HAS 85 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 26723 RELATED DB: BMRB REMARK 900 NMR CHEMICAL SHIFT ASSIGNMENTS FOR THE C-TERMINAL DOMAIN OF REMARK 900 TETRAHYMENA TCB2 IN THE ABSENCE OF CALCIUM REMARK 900 RELATED ID: 26734 RELATED DB: BMRB REMARK 900 NMR CHEMICAL SHIFT ASSIGNMENTS FOR THE C-TERMINAL DOMAIN OF REMARK 900 TETRAHYMENA TCB2 IN THE PRESENCE OF CALCIUM REMARK 900 RELATED ID: 2NCP RELATED DB: PDB
DBREF 2NCO A 117 218 UNP P09226 CB25_TETTH 117 218
SEQRES 1 A 102 SER SER LYS PRO LYS TYR ASN PRO GLU VAL GLU ALA LYS SEQRES 2 A 102 LEU ASP VAL ALA ARG ARG LEU PHE LYS ARG TYR ASP LYS SEQRES 3 A 102 ASP GLY SER GLY GLN LEU GLN ASP ASP GLU ILE ALA GLY SEQRES 4 A 102 LEU LEU LYS ASP THR TYR ALA GLU MET GLY MET SER ASN SEQRES 5 A 102 PHE THR PRO THR LYS GLU ASP VAL LYS ILE TRP LEU GLN SEQRES 6 A 102 MET ALA ASP THR ASN SER ASP GLY SER VAL SER LEU GLU SEQRES 7 A 102 GLU TYR GLU ASP LEU ILE ILE LYS SER LEU GLN LYS ALA SEQRES 8 A 102 GLY ILE ARG VAL GLU LYS GLN SER LEU VAL PHE
HELIX 1 1 PRO A 124 TYR A 140 1 17 HELIX 2 2 ASP A 150 MET A 164 1 15 HELIX 3 3 LYS A 173 MET A 182 1 10 HELIX 4 4 LEU A 193 GLN A 205 1 13
SHEET 1 A 2 GLN A 147 LEU A 148 0 SHEET 2 A 2 VAL A 191 SER A 192 -1 O VAL A 191 N LEU A 148
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000