10 20 30 40 50 60 70 80 2LEF - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric Unit
HEADER GENE REGULATION/DNA 13-OCT-98 2LEF
TITLE LEF1 HMG DOMAIN (FROM MOUSE), COMPLEXED WITH DNA (15BP), TITLE 2 NMR, 12 STRUCTURES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (LYMPHOID ENHANCER-BINDING FACTOR); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HMG; COMPND 5 SYNONYM: LEF-1 HMG; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'- COMPND 10 D(*CP*AP*CP*CP*CP*TP*TP*TP*GP*AP*AP*GP*CP*TP*C)-3'); COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: LEF-1 BINDING SITE; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: DNA (5'- COMPND 16 D(*GP*AP*GP*CP*TP*TP*CP*AP*AP*AP*GP*GP*GP*TP*G)-3'); COMPND 17 CHAIN: C; COMPND 18 FRAGMENT: LEF-1 BINDING SITE; COMPND 19 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 STRAIN: BL21 (DE3); SOURCE 6 CELL: PRE-B AND T LYMPHOCYTE; SOURCE 7 GENE: LEF1; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 11 EXPRESSION_SYSTEM_VECTOR: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PET-21A; SOURCE 13 EXPRESSION_SYSTEM_GENE: LEF1; SOURCE 14 MOL_ID: 2; SOURCE 15 SYNTHETIC: YES; SOURCE 16 MOL_ID: 3; SOURCE 17 SYNTHETIC: YES
KEYWDS LEF1, HMG, TCR-A, TRANSCRIPTION FACTOR, DNA BINDING, DNA KEYWDS 2 BENDING, COMPLEX (HMG DOMAIN/DNA), GENE REGULATION/DNA KEYWDS 3 COMPLEX
EXPDTA SOLUTION NMR
NUMMDL 12
AUTHOR X.LI,J.J.LOVE,D.A.CASE,P.E.WRIGHT
REVDAT 3 24-FEB-09 2LEF 1 VERSN REVDAT 2 29-DEC-99 2LEF 4 HEADER COMPND REMARK JRNL REVDAT 2 2 4 ATOM SOURCE SEQRES REVDAT 1 21-OCT-98 2LEF 0
SPRSDE 21-OCT-98 2LEF 1LEF
JRNL AUTH J.J.LOVE,X.LI,D.A.CASE,K.GIESE,R.GROSSCHEDL, JRNL AUTH 2 P.E.WRIGHT JRNL TITL STRUCTURAL BASIS FOR DNA BENDING BY THE JRNL TITL 2 ARCHITECTURAL TRANSCRIPTION FACTOR LEF-1. JRNL REF NATURE V. 376 791 1995 JRNL REFN ISSN 0028-0836 JRNL PMID 7651541 JRNL DOI 10.1038/376791A0
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER REMARK 3 AUTHORS : PEARLMAN,CASE,CALDWELL,ROSS,CHEATHAM, FERGUSON, REMARK 3 SEIBEL,SINGH,WEINER,KOLLMAN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN REMARK 3 THE JRNL CITATION ABOVE
REMARK 4 REMARK 4 2LEF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-AUG-99. REMARK 100 THE RCSB ID CODE IS RCSB008036.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.7 REMARK 210 IONIC STRENGTH : 10 MM KCL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : CT-HNCA, CBCA(CO)NH, HNCACB, REMARK 210 C(CO)NH-TOCSY, HCCH-COSY, HCCH REMARK 210 -TOCSY, (15N)3D NOESY-HSQC, REMARK 210 (13C)3D NOESY-HSQC, (13C/13C) REMARK 210 4D HMQC-NOESY-HMQC, 2D 13C/15N REMARK 210 DOUBLE HALF-FILTERED NOESY, 3D REMARK 210 13C-SELECTED(W1, W2) 12C- REMARK 210 FILTERED (W3) NOESY, 2D 1H REMARK 210 NOESY, AROMATIC 13C CT-HSQC, REMARK 210 HNCA-J, HNHA, HNHB, HACAHB- REMARK 210 COSY, HMBC, 3D LRCC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 600 MHZ, 750 MHZ REMARK 210 SPECTROMETER MODEL : AMX500, AMX600, DMX750 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX, DIANA, AMBER REMARK 210 METHOD USED : DG IN TORSION SPACE (DIANA) REMARK 210 AND DYNAMICAL SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 28 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 12 REMARK 210 CONFORMERS, SELECTION CRITERIA : CONSTRAINTS VIOLATION, AMBER REMARK 210 ENERGIES REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 3 REMARK 210 REMARK 210 REMARK: PRESSURE: 1 ATM SOLVENT SYSTEM: 90%H2O/10%D2O,
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 DC B 1 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 1 DT B 6 C6 - C5 - C7 ANGL. DEV. = -4.6 DEGREES REMARK 500 1 DA B 11 O4' - C1' - N9 ANGL. DEV. = 3.6 DEGREES REMARK 500 1 DC B 13 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 1 DT B 14 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 1 DG C 1 O4' - C1' - N9 ANGL. DEV. = 3.8 DEGREES REMARK 500 1 DA C 2 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 1 DG C 3 C1' - O4' - C4' ANGL. DEV. = -6.4 DEGREES REMARK 500 1 DG C 3 O4' - C1' - N9 ANGL. DEV. = 7.0 DEGREES REMARK 500 1 DT C 6 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 1 DA C 10 O4' - C1' - N9 ANGL. DEV. = 3.4 DEGREES REMARK 500 1 DG C 12 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 1 DG C 13 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 1 DT C 14 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 1 DG C 15 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 2 DC B 1 O4' - C1' - N1 ANGL. DEV. = 3.6 DEGREES REMARK 500 2 DA B 2 O4' - C1' - N9 ANGL. DEV. = 3.4 DEGREES REMARK 500 2 DC B 5 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 2 DA B 11 O4' - C1' - N9 ANGL. DEV. = 4.5 DEGREES REMARK 500 2 DG B 12 O4' - C4' - C3' ANGL. DEV. = 4.1 DEGREES REMARK 500 2 DG B 12 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 2 DC B 13 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 2 DT B 14 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 2 DG C 1 O4' - C1' - N9 ANGL. DEV. = 3.9 DEGREES REMARK 500 2 DA C 2 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 2 DG C 3 C1' - O4' - C4' ANGL. DEV. = -6.3 DEGREES REMARK 500 2 DG C 3 O4' - C1' - N9 ANGL. DEV. = 6.6 DEGREES REMARK 500 2 DC C 4 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 2 DT C 6 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 2 DA C 10 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 2 DG C 12 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 2 DG C 13 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 2 DT C 14 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 2 DG C 15 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 3 DC B 1 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 3 DA B 2 O4' - C1' - N9 ANGL. DEV. = 3.7 DEGREES REMARK 500 3 DC B 5 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 3 DT B 6 C6 - C5 - C7 ANGL. DEV. = -3.7 DEGREES REMARK 500 3 DA B 10 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 3 DA B 11 C1' - O4' - C4' ANGL. DEV. = -6.5 DEGREES REMARK 500 3 DA B 11 O4' - C1' - C2' ANGL. DEV. = -5.5 DEGREES REMARK 500 3 DA B 11 O4' - C1' - N9 ANGL. DEV. = 4.2 DEGREES REMARK 500 3 DG B 12 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 3 DT B 14 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 3 DG C 1 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 3 DG C 3 C1' - O4' - C4' ANGL. DEV. = -6.3 DEGREES REMARK 500 3 DG C 3 O4' - C1' - N9 ANGL. DEV. = 6.4 DEGREES REMARK 500 3 DA C 8 C4' - C3' - C2' ANGL. DEV. = -4.7 DEGREES REMARK 500 3 DA C 8 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 3 DA C 10 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 216 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 4 152.66 -45.75 REMARK 500 1 PRO A 6 96.26 -66.85 REMARK 500 1 LEU A 7 143.19 -39.12 REMARK 500 1 LYS A 28 -42.39 -137.08 REMARK 500 1 GLU A 29 106.29 -39.26 REMARK 500 1 PRO A 68 103.92 -46.09 REMARK 500 1 ARG A 73 73.55 -55.67 REMARK 500 1 ASN A 75 20.93 -152.59 REMARK 500 1 LYS A 81 143.36 71.14 REMARK 500 1 LYS A 83 -59.67 60.99 REMARK 500 1 ARG A 84 -73.96 72.38 REMARK 500 2 PRO A 6 84.38 -59.67 REMARK 500 2 LEU A 7 111.40 -39.74 REMARK 500 2 LYS A 28 -45.97 -142.07 REMARK 500 2 GLU A 29 103.97 -39.65 REMARK 500 2 SER A 71 58.20 -118.94 REMARK 500 2 ARG A 84 70.04 62.09 REMARK 500 2 GLU A 85 36.69 -75.11 REMARK 500 3 LYS A 4 150.13 -44.84 REMARK 500 3 LYS A 28 -33.98 -141.22 REMARK 500 3 PRO A 68 98.88 -42.49 REMARK 500 3 ARG A 73 70.29 -65.38 REMARK 500 3 ASN A 75 16.93 -151.98 REMARK 500 3 LYS A 81 100.56 -56.59 REMARK 500 4 PRO A 6 88.10 -65.55 REMARK 500 4 LEU A 7 121.16 -39.45 REMARK 500 4 LYS A 28 -40.23 -138.71 REMARK 500 4 GLU A 29 101.07 -38.98 REMARK 500 4 ARG A 73 69.28 -33.10 REMARK 500 4 LYS A 81 68.86 -62.75 REMARK 500 4 LYS A 83 -46.94 -133.28 REMARK 500 4 ARG A 84 -144.26 -157.31 REMARK 500 5 PRO A 6 96.34 -65.93 REMARK 500 5 LEU A 7 108.42 -39.66 REMARK 500 5 LYS A 28 -44.44 -132.80 REMARK 500 5 GLU A 29 102.32 -38.95 REMARK 500 5 TRP A 70 101.47 -59.55 REMARK 500 5 SER A 71 57.13 -119.22 REMARK 500 5 LYS A 81 82.72 -68.10 REMARK 500 5 ARG A 84 -64.54 65.61 REMARK 500 6 PRO A 6 92.35 -68.26 REMARK 500 6 LEU A 7 118.75 -39.72 REMARK 500 6 LYS A 28 -33.75 -144.77 REMARK 500 6 ARG A 73 91.83 -31.50 REMARK 500 6 ARG A 82 -94.02 -105.19 REMARK 500 7 PRO A 6 94.30 -66.55 REMARK 500 7 LEU A 7 127.80 -39.72 REMARK 500 7 LYS A 28 -39.47 -141.70 REMARK 500 7 GLU A 29 106.63 -39.37 REMARK 500 7 ALA A 31 -50.44 -168.92 REMARK 500 7 SER A 71 105.47 -55.53 REMARK 500 7 ARG A 73 30.70 -92.03 REMARK 500 7 LYS A 81 76.22 -63.38 REMARK 500 7 ARG A 84 -146.11 62.12 REMARK 500 7 GLU A 85 70.57 -69.66 REMARK 500 8 HIS A 2 92.74 -67.28 REMARK 500 8 LEU A 7 90.99 -63.27 REMARK 500 8 LYS A 28 -43.64 -136.58 REMARK 500 8 GLU A 29 103.13 -38.88 REMARK 500 8 PRO A 68 79.44 -56.93 REMARK 500 8 LYS A 81 107.64 -58.28 REMARK 500 9 HIS A 2 85.25 -67.85 REMARK 500 9 PRO A 6 98.85 -66.04 REMARK 500 9 LEU A 7 106.05 -39.47 REMARK 500 9 LYS A 28 -41.83 -137.64 REMARK 500 9 GLU A 29 107.13 -39.07 REMARK 500 9 ARG A 82 -68.03 17.19 REMARK 500 9 GLU A 85 46.22 -73.63 REMARK 500 10 PRO A 6 91.95 -65.65 REMARK 500 10 LEU A 7 123.50 -39.29 REMARK 500 10 LYS A 28 -44.11 -145.27 REMARK 500 10 GLU A 29 105.11 -39.88 REMARK 500 11 PRO A 6 91.83 -65.82 REMARK 500 11 LEU A 7 118.26 -39.25 REMARK 500 11 LYS A 28 -32.22 -139.79 REMARK 500 11 SER A 71 56.19 -119.92 REMARK 500 11 LYS A 78 -56.41 -137.11 REMARK 500 11 LYS A 83 -65.07 63.97 REMARK 500 11 ARG A 84 -91.40 56.23 REMARK 500 12 LYS A 4 126.20 -39.40 REMARK 500 12 LYS A 5 175.89 -57.85 REMARK 500 12 LYS A 28 -44.62 -136.34 REMARK 500 12 GLU A 29 104.90 -39.25 REMARK 500 12 ARG A 73 81.67 2.44 REMARK 500 12 GLU A 85 58.61 25.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 DC B 4 0.12 SIDE_CHAIN REMARK 500 1 DA B 10 0.08 SIDE_CHAIN REMARK 500 1 DG B 12 0.14 SIDE_CHAIN REMARK 500 1 DT B 14 0.07 SIDE_CHAIN REMARK 500 1 DG C 3 0.09 SIDE_CHAIN REMARK 500 1 DC C 4 0.07 SIDE_CHAIN REMARK 500 1 DA C 8 0.08 SIDE_CHAIN REMARK 500 1 DA C 9 0.13 SIDE_CHAIN REMARK 500 1 DG C 12 0.08 SIDE_CHAIN REMARK 500 1 DG C 13 0.07 SIDE_CHAIN REMARK 500 1 TYR A 13 0.07 SIDE_CHAIN REMARK 500 1 TYR A 52 0.18 SIDE_CHAIN REMARK 500 1 TYR A 53 0.12 SIDE_CHAIN REMARK 500 1 ARG A 60 0.19 SIDE_CHAIN REMARK 500 1 ARG A 82 0.14 SIDE_CHAIN REMARK 500 2 DC B 4 0.13 SIDE_CHAIN REMARK 500 2 DC B 5 0.07 SIDE_CHAIN REMARK 500 2 DT B 6 0.07 SIDE_CHAIN REMARK 500 2 DG B 9 0.09 SIDE_CHAIN REMARK 500 2 DA B 10 0.07 SIDE_CHAIN REMARK 500 2 DG C 3 0.07 SIDE_CHAIN REMARK 500 2 DA C 8 0.07 SIDE_CHAIN REMARK 500 2 DA C 9 0.12 SIDE_CHAIN REMARK 500 2 TYR A 52 0.15 SIDE_CHAIN REMARK 500 2 TYR A 53 0.19 SIDE_CHAIN REMARK 500 2 TYR A 67 0.15 SIDE_CHAIN REMARK 500 2 ARG A 82 0.11 SIDE_CHAIN REMARK 500 3 DC B 4 0.13 SIDE_CHAIN REMARK 500 3 DG B 9 0.07 SIDE_CHAIN REMARK 500 3 DA B 10 0.06 SIDE_CHAIN REMARK 500 3 DG B 12 0.13 SIDE_CHAIN REMARK 500 3 DG C 3 0.09 SIDE_CHAIN REMARK 500 3 DT C 5 0.07 SIDE_CHAIN REMARK 500 3 DC C 7 0.11 SIDE_CHAIN REMARK 500 3 DA C 8 0.08 SIDE_CHAIN REMARK 500 3 DA C 9 0.13 SIDE_CHAIN REMARK 500 3 DG C 12 0.08 SIDE_CHAIN REMARK 500 3 TYR A 13 0.07 SIDE_CHAIN REMARK 500 3 TYR A 52 0.15 SIDE_CHAIN REMARK 500 3 TYR A 53 0.11 SIDE_CHAIN REMARK 500 3 TYR A 76 0.07 SIDE_CHAIN REMARK 500 4 DC B 4 0.10 SIDE_CHAIN REMARK 500 4 DT B 6 0.07 SIDE_CHAIN REMARK 500 4 DT B 7 0.07 SIDE_CHAIN REMARK 500 4 DG B 9 0.06 SIDE_CHAIN REMARK 500 4 DA B 10 0.05 SIDE_CHAIN REMARK 500 4 DA B 11 0.06 SIDE_CHAIN REMARK 500 4 DG B 12 0.13 SIDE_CHAIN REMARK 500 4 DG C 3 0.06 SIDE_CHAIN REMARK 500 4 DA C 9 0.12 SIDE_CHAIN REMARK 500 4 DG C 12 0.09 SIDE_CHAIN REMARK 500 4 DG C 13 0.06 SIDE_CHAIN REMARK 500 4 TYR A 13 0.08 SIDE_CHAIN REMARK 500 4 ARG A 18 0.09 SIDE_CHAIN REMARK 500 4 TYR A 52 0.17 SIDE_CHAIN REMARK 500 4 TYR A 53 0.11 SIDE_CHAIN REMARK 500 4 TYR A 67 0.10 SIDE_CHAIN REMARK 500 5 DC B 4 0.12 SIDE_CHAIN REMARK 500 5 DC B 5 0.07 SIDE_CHAIN REMARK 500 5 DT B 6 0.07 SIDE_CHAIN REMARK 500 5 DT B 7 0.08 SIDE_CHAIN REMARK 500 5 DG B 9 0.08 SIDE_CHAIN REMARK 500 5 DA B 10 0.07 SIDE_CHAIN REMARK 500 5 DG C 3 0.07 SIDE_CHAIN REMARK 500 5 DC C 7 0.07 SIDE_CHAIN REMARK 500 5 DA C 9 0.13 SIDE_CHAIN REMARK 500 5 DG C 15 0.06 SIDE_CHAIN REMARK 500 5 TYR A 52 0.14 SIDE_CHAIN REMARK 500 5 TYR A 53 0.19 SIDE_CHAIN REMARK 500 5 TYR A 67 0.11 SIDE_CHAIN REMARK 500 5 ARG A 82 0.08 SIDE_CHAIN REMARK 500 6 DC B 4 0.11 SIDE_CHAIN REMARK 500 6 DG B 9 0.08 SIDE_CHAIN REMARK 500 6 DA B 11 0.10 SIDE_CHAIN REMARK 500 6 DG B 12 0.11 SIDE_CHAIN REMARK 500 6 DC C 7 0.07 SIDE_CHAIN REMARK 500 6 DA C 9 0.14 SIDE_CHAIN REMARK 500 6 DG C 12 0.08 SIDE_CHAIN REMARK 500 6 DG C 13 0.07 SIDE_CHAIN REMARK 500 6 TYR A 52 0.14 SIDE_CHAIN REMARK 500 6 TYR A 53 0.12 SIDE_CHAIN REMARK 500 6 TYR A 76 0.09 SIDE_CHAIN REMARK 500 7 DC B 4 0.15 SIDE_CHAIN REMARK 500 7 DT B 7 0.06 SIDE_CHAIN REMARK 500 7 DG B 9 0.06 SIDE_CHAIN REMARK 500 7 DA B 11 0.08 SIDE_CHAIN REMARK 500 7 DC B 13 0.07 SIDE_CHAIN REMARK 500 7 DT C 5 0.08 SIDE_CHAIN REMARK 500 7 DC C 7 0.08 SIDE_CHAIN REMARK 500 7 DA C 9 0.13 SIDE_CHAIN REMARK 500 7 DG C 12 0.07 SIDE_CHAIN REMARK 500 7 DG C 13 0.09 SIDE_CHAIN REMARK 500 7 TYR A 52 0.11 SIDE_CHAIN REMARK 500 7 TYR A 53 0.12 SIDE_CHAIN REMARK 500 8 DC B 4 0.13 SIDE_CHAIN REMARK 500 8 DT B 6 0.07 SIDE_CHAIN REMARK 500 8 DT B 7 0.07 SIDE_CHAIN REMARK 500 8 DA B 10 0.06 SIDE_CHAIN REMARK 500 8 DA B 11 0.06 SIDE_CHAIN REMARK 500 8 DG B 12 0.09 SIDE_CHAIN REMARK 500 8 DC B 13 0.07 SIDE_CHAIN REMARK 500 8 DG C 3 0.07 SIDE_CHAIN REMARK 500 8 DA C 9 0.15 SIDE_CHAIN REMARK 500 8 TYR A 52 0.14 SIDE_CHAIN REMARK 500 8 ARG A 60 0.09 SIDE_CHAIN REMARK 500 9 DC B 4 0.11 SIDE_CHAIN REMARK 500 9 DT B 6 0.07 SIDE_CHAIN REMARK 500 9 DA B 11 0.09 SIDE_CHAIN REMARK 500 9 DC B 13 0.08 SIDE_CHAIN REMARK 500 9 DT C 5 0.08 SIDE_CHAIN REMARK 500 9 DC C 7 0.08 SIDE_CHAIN REMARK 500 9 DA C 9 0.15 SIDE_CHAIN REMARK 500 9 DG C 12 0.08 SIDE_CHAIN REMARK 500 9 DG C 13 0.09 SIDE_CHAIN REMARK 500 9 TYR A 52 0.14 SIDE_CHAIN REMARK 500 9 TYR A 53 0.12 SIDE_CHAIN REMARK 500 9 TYR A 76 0.07 SIDE_CHAIN REMARK 500 10 DC B 4 0.13 SIDE_CHAIN REMARK 500 10 DG C 3 0.08 SIDE_CHAIN REMARK 500 10 DC C 7 0.08 SIDE_CHAIN REMARK 500 10 DA C 9 0.13 SIDE_CHAIN REMARK 500 10 DG C 13 0.07 SIDE_CHAIN REMARK 500 10 TYR A 13 0.07 SIDE_CHAIN REMARK 500 10 TYR A 52 0.16 SIDE_CHAIN REMARK 500 10 TYR A 53 0.12 SIDE_CHAIN REMARK 500 10 TYR A 67 0.14 SIDE_CHAIN REMARK 500 10 ARG A 73 0.08 SIDE_CHAIN REMARK 500 10 ARG A 82 0.10 SIDE_CHAIN REMARK 500 11 DC B 4 0.10 SIDE_CHAIN REMARK 500 11 DT B 7 0.07 SIDE_CHAIN REMARK 500 11 DG B 9 0.06 SIDE_CHAIN REMARK 500 11 DG C 3 0.07 SIDE_CHAIN REMARK 500 11 DT C 5 0.07 SIDE_CHAIN REMARK 500 11 DC C 7 0.07 SIDE_CHAIN REMARK 500 11 DA C 9 0.13 SIDE_CHAIN REMARK 500 11 DG C 12 0.09 SIDE_CHAIN REMARK 500 11 DG C 13 0.08 SIDE_CHAIN REMARK 500 11 TYR A 13 0.08 SIDE_CHAIN REMARK 500 11 ARG A 40 0.09 SIDE_CHAIN REMARK 500 11 TYR A 52 0.14 SIDE_CHAIN REMARK 500 11 TYR A 53 0.12 SIDE_CHAIN REMARK 500 11 TYR A 67 0.14 SIDE_CHAIN REMARK 500 11 ARG A 73 0.10 SIDE_CHAIN REMARK 500 12 DC B 4 0.09 SIDE_CHAIN REMARK 500 12 DT B 6 0.06 SIDE_CHAIN REMARK 500 12 DT B 7 0.08 SIDE_CHAIN REMARK 500 12 DG B 9 0.07 SIDE_CHAIN REMARK 500 12 DA B 11 0.11 SIDE_CHAIN REMARK 500 12 DG B 12 0.12 SIDE_CHAIN REMARK 500 12 DG C 3 0.06 SIDE_CHAIN REMARK 500 12 DA C 8 0.06 SIDE_CHAIN REMARK 500 12 DA C 9 0.13 SIDE_CHAIN REMARK 500 12 DG C 12 0.07 SIDE_CHAIN REMARK 500 12 DG C 13 0.06 SIDE_CHAIN REMARK 500 12 TYR A 13 0.09 SIDE_CHAIN REMARK 500 12 TYR A 52 0.14 SIDE_CHAIN REMARK 500 12 TYR A 53 0.11 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: S1 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: DNA MINOR GROOVE PACKING AND HYDROGEN BONDING. REMARK 800 SITE_IDENTIFIER: S2 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: DNA MINOR GROOVE INSERTION.
DBREF 2LEF A 1 86 UNP P27782 LEF1_MOUSE 295 380 DBREF 2LEF B 1 15 PDB 2LEF 2LEF 1 15 DBREF 2LEF C 1 15 PDB 2LEF 2LEF 1 15
SEQADV 2LEF MET A 1 UNP P27782 PRO 295 CONFLICT SEQADV 2LEF SER A 25 UNP P27782 CYS 319 ENGINEERED
SEQRES 1 A 86 MET HIS ILE LYS LYS PRO LEU ASN ALA PHE MET LEU TYR SEQRES 2 A 86 MET LYS GLU MET ARG ALA ASN VAL VAL ALA GLU SER THR SEQRES 3 A 86 LEU LYS GLU SER ALA ALA ILE ASN GLN ILE LEU GLY ARG SEQRES 4 A 86 ARG TRP HIS ALA LEU SER ARG GLU GLU GLN ALA LYS TYR SEQRES 5 A 86 TYR GLU LEU ALA ARG LYS GLU ARG GLN LEU HIS MET GLN SEQRES 6 A 86 LEU TYR PRO GLY TRP SER ALA ARG ASP ASN TYR GLY LYS SEQRES 7 A 86 LYS LYS LYS ARG LYS ARG GLU LYS SEQRES 1 B 15 DC DA DC DC DC DT DT DT DG DA DA DG DC SEQRES 2 B 15 DT DC SEQRES 1 C 15 DG DA DG DC DT DT DC DA DA DA DG DG DG SEQRES 2 C 15 DT DG
HELIX 1 1 ALA A 9 GLU A 24 1 16 HELIX 2 2 SER A 30 ALA A 43 1 14 HELIX 3 3 ARG A 46 LEU A 66 1 21
SITE 1 S1 1 TYR A 76 SITE 1 S2 2 MET A 11 MET A 14
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000