2LB6 - Header Asymmetric Unit

HEADER TRANSPORT PROTEIN 23-MAR-11 2LB6

TITLE STRUCTURE OF 18694DA MUP, TYPICAL TO THE MAJOR URINARY PROTEIN FAMILY: TITLE 2 MUP9, MUP11, MUP15, MUP18 & MUP19

COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR URINARY PROTEIN 6; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MUP 6, ALPHA-2U-GLOBULIN, GROUP 1, BS6; COMPND 5 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 STRAIN: C57; SOURCE 6 GENE: MUP6; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET28B

KEYWDS LIPOCALIN, TRANSPORT PROTEIN

EXPDTA SOLUTION NMR

NUMMDL 20

AUTHOR M.M.PHELAN,L.MCLEAN,R.J.BEYNON,J.L.HURST,L.LIAN

REVDAT 1 28-MAR-12 2LB6 0

JRNL AUTH M.M.PHELAN,L.MCLEAN,R.J.BEYNON,J.L.HURST,L.LIAN JRNL TITL STRUCTURAL INSIGHTS INTO THE SPECIFICITY OF DARCIN, AN JRNL TITL 2 ATYPICAL MAJOR URINARY PROTEIN. JRNL REF TO BE PUBLISHED JRNL REFN

REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.M.PHELAN,L.MCLEAN,R.J.BEYNON,J.L.HURST,L.LIAN REMARK 1 TITL 1H, 15N AND 13C RESONANCE ASSIGNMENT OF A COMMON MAJOR REMARK 1 TITL 2 URINARY PROTEIN OF THE MOUSE REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 AND 3 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 2LB6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-11. REMARK 100 THE RCSB ID CODE IS RCSB102182.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 25 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-98% 13C; U-98% 15N] REMARK 210 MUP11, 25 MM POTASSIUM PHOSPHATE, REMARK 210 0.2 % SODIUM AZIDE, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 2D 1H-13C HSQC AROMATIC; 3D REMARK 210 CBCA(CO)NH; 3D HNCACB; 3D HNCO; REMARK 210 3D HN(CA)CO; 3D HBHA(CO)NH; 3D REMARK 210 HBHANH; 3D HCCH-TOCSY; 3D 1H-13C REMARK 210 NOESY ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D 1H-15N NOESY; 2D REMARK 210 CB(CGCD)HD AROMATIC; 3D HCCH- REMARK 210 TOCSY AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 2.1.3, CCPNMR_ANALYSIS REMARK 210 2.1.5, TALOS PLUS, CYANA 2.1 AND 3 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.

REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 46 81.41 -68.69 REMARK 500 1 LYS A 47 71.42 167.52 REMARK 500 1 ILE A 51 40.69 -94.87 REMARK 500 1 LEU A 67 -167.37 -115.15 REMARK 500 1 LYS A 95 -177.01 -58.54 REMARK 500 1 ASP A 115 52.85 -113.20 REMARK 500 1 ASN A 118 -70.10 -120.59 REMARK 500 1 SER A 146 -179.88 -68.67 REMARK 500 2 HIS A 12 175.65 -58.81 REMARK 500 2 ASP A 46 80.91 -68.88 REMARK 500 2 LYS A 47 73.81 167.48 REMARK 500 2 ILE A 51 44.11 -100.53 REMARK 500 2 ASN A 54 40.28 -96.06 REMARK 500 2 LYS A 92 170.77 -52.60 REMARK 500 2 THR A 102 91.78 -64.99 REMARK 500 2 ASP A 115 52.46 -112.76 REMARK 500 2 ASN A 118 -69.68 -120.99 REMARK 500 2 CYS A 157 -70.22 -60.85 REMARK 500 2 LEU A 163 159.04 -49.38 REMARK 500 2 ASN A 174 31.43 -140.52 REMARK 500 3 HIS A 13 177.34 -56.32 REMARK 500 3 ALA A 22 -179.34 -170.29 REMARK 500 3 ASP A 46 79.31 -68.66 REMARK 500 3 LYS A 47 77.26 167.50 REMARK 500 3 ILE A 51 46.33 -104.31 REMARK 500 3 ASN A 54 56.18 -105.74 REMARK 500 3 LEU A 67 -167.78 -107.47 REMARK 500 3 ASN A 69 13.31 -144.23 REMARK 500 3 ASP A 115 52.39 -112.83 REMARK 500 3 ASN A 118 -70.80 -120.62 REMARK 500 3 ASN A 174 139.42 -174.58 REMARK 500 4 HIS A 12 60.16 62.19 REMARK 500 4 GLU A 21 -179.96 -69.60 REMARK 500 4 SER A 45 148.62 -170.15 REMARK 500 4 ASP A 46 80.61 -68.84 REMARK 500 4 LYS A 47 74.94 167.22 REMARK 500 4 ILE A 51 46.90 -106.49 REMARK 500 4 ASN A 54 68.84 -118.85 REMARK 500 4 ASN A 69 12.12 -143.67 REMARK 500 4 THR A 102 92.55 -69.69 REMARK 500 4 ASP A 115 52.66 -113.68 REMARK 500 4 ASN A 118 -69.01 -120.83 REMARK 500 4 ASN A 174 103.43 -174.32 REMARK 500 4 LEU A 177 176.91 -55.57 REMARK 500 5 HIS A 12 172.37 -53.63 REMARK 500 5 GLU A 21 -179.53 -69.48 REMARK 500 5 ASP A 46 81.05 -68.98 REMARK 500 5 LYS A 47 79.34 165.78 REMARK 500 5 ILE A 51 49.60 -109.04 REMARK 500 5 LEU A 59 159.37 -49.57 REMARK 500 REMARK 500 THIS ENTRY HAS 230 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17447 RELATED DB: BMRB REMARK 900 1H, 15N AND 13C RESONANCE ASSIGNMENT OF A COMMON MAJOR REMARK 900 URINARY PROTEIN OF THE MOUSE

DBREF 2LB6 A 20 181 UNP P02762 MUP6_MOUSE 19 180

SEQADV 2LB6 MET A 6 UNP P02762 EXPRESSION TAG SEQADV 2LB6 GLY A 7 UNP P02762 EXPRESSION TAG SEQADV 2LB6 SER A 8 UNP P02762 EXPRESSION TAG SEQADV 2LB6 SER A 9 UNP P02762 EXPRESSION TAG SEQADV 2LB6 HIS A 10 UNP P02762 EXPRESSION TAG SEQADV 2LB6 HIS A 11 UNP P02762 EXPRESSION TAG SEQADV 2LB6 HIS A 12 UNP P02762 EXPRESSION TAG SEQADV 2LB6 HIS A 13 UNP P02762 EXPRESSION TAG SEQADV 2LB6 HIS A 14 UNP P02762 EXPRESSION TAG SEQADV 2LB6 HIS A 15 UNP P02762 EXPRESSION TAG SEQADV 2LB6 ILE A 16 UNP P02762 EXPRESSION TAG SEQADV 2LB6 GLU A 17 UNP P02762 EXPRESSION TAG SEQADV 2LB6 GLY A 18 UNP P02762 EXPRESSION TAG SEQADV 2LB6 ARG A 19 UNP P02762 EXPRESSION TAG

SEQRES 1 A 176 MET GLY SER SER HIS HIS HIS HIS HIS HIS ILE GLU GLY SEQRES 2 A 176 ARG GLU GLU ALA SER SER THR GLY ARG ASN PHE ASN VAL SEQRES 3 A 176 GLU LYS ILE ASN GLY GLU TRP HIS THR ILE ILE LEU ALA SEQRES 4 A 176 SER ASP LYS ARG GLU LYS ILE GLU ASP ASN GLY ASN PHE SEQRES 5 A 176 ARG LEU PHE LEU GLU GLN ILE HIS VAL LEU GLU ASN SER SEQRES 6 A 176 LEU VAL LEU LYS PHE HIS THR VAL ARG ASP GLU GLU CYS SEQRES 7 A 176 SER GLU LEU SER MET VAL ALA ASP LYS THR GLU LYS ALA SEQRES 8 A 176 GLY GLU TYR SER VAL THR TYR ASP GLY PHE ASN THR PHE SEQRES 9 A 176 THR ILE PRO LYS THR ASP TYR ASP ASN PHE LEU MET ALA SEQRES 10 A 176 HIS LEU ILE ASN GLU LYS ASP GLY GLU THR PHE GLN LEU SEQRES 11 A 176 MET GLY LEU TYR GLY ARG GLU PRO ASP LEU SER SER ASP SEQRES 12 A 176 ILE LYS GLU ARG PHE ALA GLN LEU CYS GLU GLU HIS GLY SEQRES 13 A 176 ILE LEU ARG GLU ASN ILE ILE ASP LEU SER ASN ALA ASN SEQRES 14 A 176 ARG CYS LEU GLN ALA ARG GLU

HELIX 1 1 ASN A 30 ASN A 35 1 6 HELIX 2 2 ILE A 149 GLU A 158 1 10 HELIX 3 3 LEU A 163 GLU A 165 5 3

SHEET 1 A 6 GLU A 98 TYR A 99 0 SHEET 2 A 6 ASN A 107 THR A 110 -1 O PHE A 109 N TYR A 99 SHEET 3 A 6 HIS A 123 LYS A 128 -1 O HIS A 123 N THR A 110 SHEET 4 A 6 GLU A 131 GLY A 140 -1 O LEU A 135 N LEU A 124 SHEET 5 A 6 PHE A 119 MET A 121 -1 N LEU A 120 O TYR A 139 SHEET 6 A 6 THR A 114 ASP A 115 -1 O ASP A 115 N PHE A 119 SHEET 1 B 6 GLU A 98 TYR A 99 0 SHEET 2 B 6 ASN A 107 THR A 110 -1 O PHE A 109 N TYR A 99 SHEET 3 B 6 HIS A 123 LYS A 128 -1 O HIS A 123 N THR A 110 SHEET 4 B 6 GLU A 131 GLY A 140 -1 O LEU A 135 N LEU A 124 SHEET 5 B 6 THR A 40 SER A 45 -1 N ILE A 42 O LEU A 138 SHEET 6 B 6 ILE A 167 ASP A 169 -1 O ILE A 168 N LEU A 43 SHEET 1 C 3 PHE A 60 LEU A 61 0 SHEET 2 C 3 LEU A 71 HIS A 76 -1 O HIS A 76 N PHE A 60 SHEET 3 C 3 HIS A 65 VAL A 66 -1 N HIS A 65 O VAL A 72 SHEET 1 D 3 PHE A 60 LEU A 61 0 SHEET 2 D 3 LEU A 71 HIS A 76 -1 O HIS A 76 N PHE A 60 SHEET 3 D 3 GLU A 85 ALA A 90 -1 O ALA A 90 N LEU A 71

SSBOND 1 CYS A 83 CYS A 176 1555 1555 1.99

LINK SG CYS A 83 SG CYS A 176 1555 1555 1.99

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000