10 20 30 40 50 60 70 80 2L7I - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SIGNALING PROTEIN 09-DEC-10 2L7I
TITLE THE SOLUTION STRUCTURE OF THE HAMP DOMAIN OF THE HYPOTHETICAL TITLE 2 TRANSMEMBRANE RECEPTOR AF1503 (A291F VARIANT)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: HAMP DOMAIN RESIDUES 278-331; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 GENE: AF1503, AF_1503; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PGEX4T
KEYWDS SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 18
AUTHOR M.COLES,M.HULKO,J.MARTIN,A.N.LUPAS
REVDAT 2 06-APR-11 2L7I 1 JRNL REVDAT 1 19-JAN-11 2L7I 0
JRNL AUTH H.U.FERRIS,S.DUNIN-HORKAWICZ,L.G.MONDEJAR,M.HULKO,K.HANTKE, JRNL AUTH 2 J.MARTIN,J.E.SCHULTZ,K.ZETH,A.N.LUPAS,M.COLES JRNL TITL THE MECHANISMS OF HAMP-MEDIATED SIGNALING IN TRANSMEMBRANE JRNL TITL 2 RECEPTORS. JRNL REF STRUCTURE V. 19 378 2011 JRNL REFN ISSN 0969-2126 JRNL PMID 21397188 JRNL DOI 10.1016/J.STR.2011.01.006
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.HULKO,F.BERNDT,M.GRUBER,J.U.LINDER,V.TRUFFAULT,A.SCHULTZ, REMARK 1 AUTH 2 J.MARTIN,J.E.SCHULTZ,A.N.LUPAS,M.COLES REMARK 1 TITL THE HAMP DOMAIN STRUCTURE IMPLIES HELIX ROTATION IN REMARK 1 TITL 2 TRANSMEMBRANE SIGNALING. REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 126 929 2006 REMARK 1 REFN ISSN 0092-8674 REMARK 1 PMID 16959572 REMARK 1 DOI 10.1016/J.CELL.2006.06.058
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR_NIH 2.9.7 REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT AGAINST A CONFORMATIONAL REMARK 3 DATABASE POTENTIAL
REMARK 4 REMARK 4 2L7I COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-DEC-10. REMARK 100 THE RCSB ID CODE IS RCSB102053.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 7.2 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM AF1503 HAMP (A921F), 20 MM REMARK 210 PHOSPHATE BUFFER, 150 MM SODIUM REMARK 210 CHLORIDE, 90% H2O/10% D2O; 1 MM REMARK 210 [U-100% 15N] AF1503 HAMP (A921F), REMARK 210 20 MM PHOSPHATE BUFFER, 150 MM REMARK 210 SODIUM CHLORIDE, 90% H2O/10% D2O; REMARK 210 0.5 MM [U-100% 13C; U-100% 15N] REMARK 210 AF1503 HAMP (A921F), 0.5 MM REMARK 210 AF1503 HAMP (A921F), 20 MM REMARK 210 PHOSPHATE BUFFER, 150 MM SODIUM REMARK 210 CHLORIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C REMARK 210 NOESY; 2D 13C-EDITED/12C-FILTERED REMARK 210 NOESY; 2D 1H-1H NOESY; 3D CNH- REMARK 210 NOESY; 3D NNH-NOESY; 3D HNCA; 3D REMARK 210 HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY 3.110, TOPSPIN 2, X-PLOR_ REMARK 210 NIH 2.9.7 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 18 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 1 PHE A 291 CG PHE A 291 CD2 0.090 REMARK 500 13 PHE B 291 CG PHE B 291 CD1 0.090 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 305 18.28 59.39 REMARK 500 1 HIS B 305 18.20 59.37 REMARK 500 2 SER A 275 -53.41 -144.15 REMARK 500 2 HIS A 305 17.99 59.23 REMARK 500 2 SER B 275 30.02 -99.38 REMARK 500 2 THR B 279 -68.86 -90.06 REMARK 500 2 HIS B 305 18.28 59.12 REMARK 500 3 HIS A 305 18.42 59.26 REMARK 500 3 SER B 275 -68.36 -136.23 REMARK 500 3 HIS B 305 18.36 59.14 REMARK 500 4 MET A 277 30.01 -148.26 REMARK 500 4 HIS A 305 18.65 58.95 REMARK 500 4 HIS B 276 -62.53 -104.66 REMARK 500 4 HIS B 305 18.32 59.26 REMARK 500 5 HIS A 276 30.08 -158.49 REMARK 500 5 HIS A 305 18.51 59.10 REMARK 500 5 HIS B 305 18.60 58.91 REMARK 500 6 SER A 275 -47.82 -154.88 REMARK 500 6 HIS A 305 18.58 59.62 REMARK 500 6 HIS B 305 19.51 59.76 REMARK 500 7 HIS A 305 18.37 58.99 REMARK 500 7 HIS B 305 18.46 59.24 REMARK 500 8 HIS A 276 30.08 -98.80 REMARK 500 8 HIS A 305 18.38 59.16 REMARK 500 8 SER B 275 -64.76 -136.98 REMARK 500 8 HIS B 305 18.79 58.73 REMARK 500 9 MET A 277 30.15 -98.92 REMARK 500 9 HIS A 305 18.19 59.35 REMARK 500 9 MET B 277 30.01 -99.48 REMARK 500 9 SER B 278 -49.00 -133.13 REMARK 500 9 HIS B 305 18.32 59.34 REMARK 500 10 HIS A 276 30.17 -154.67 REMARK 500 10 SER A 278 30.02 -98.95 REMARK 500 10 HIS A 305 18.28 59.05 REMARK 500 10 HIS B 305 18.60 59.47 REMARK 500 11 HIS A 305 18.45 59.13 REMARK 500 11 SER B 278 30.03 -156.12 REMARK 500 11 THR B 279 -60.32 -90.08 REMARK 500 11 HIS B 305 18.13 59.09 REMARK 500 12 HIS A 305 18.48 58.90 REMARK 500 12 SER B 275 -64.42 -137.25 REMARK 500 12 HIS B 276 30.03 -149.72 REMARK 500 12 HIS B 305 18.41 59.04 REMARK 500 13 MET A 277 30.14 -98.73 REMARK 500 13 HIS A 305 18.26 59.32 REMARK 500 13 HIS B 305 18.60 59.24 REMARK 500 14 HIS A 305 18.33 59.16 REMARK 500 14 SER B 278 90.27 -65.69 REMARK 500 14 HIS B 305 18.40 59.30 REMARK 500 15 HIS A 305 18.60 59.13 REMARK 500 REMARK 500 THIS ENTRY HAS 63 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ASW RELATED DB: PDB REMARK 900 RELATED ID: 6795 RELATED DB: BMRB REMARK 900 RELATED ID: 2L7H RELATED DB: PDB REMARK 900 RELATED ID: 2Y0Q RELATED DB: PDB REMARK 900 RELATED ID: 2Y0T RELATED DB: PDB REMARK 900 RELATED ID: 2Y20 RELATED DB: PDB REMARK 900 RELATED ID: 2Y21 RELATED DB: PDB
DBREF 2L7I A 278 331 UNP O28769 O28769_ARCFU 278 331 DBREF 2L7I B 278 331 UNP O28769 O28769_ARCFU 278 331
SEQADV 2L7I GLY A 274 UNP O28769 EXPRESSION TAG SEQADV 2L7I SER A 275 UNP O28769 EXPRESSION TAG SEQADV 2L7I HIS A 276 UNP O28769 EXPRESSION TAG SEQADV 2L7I MET A 277 UNP O28769 EXPRESSION TAG SEQADV 2L7I PHE A 291 UNP O28769 ALA 291 ENGINEERED MUTATION SEQADV 2L7I GLY B 274 UNP O28769 EXPRESSION TAG SEQADV 2L7I SER B 275 UNP O28769 EXPRESSION TAG SEQADV 2L7I HIS B 276 UNP O28769 EXPRESSION TAG SEQADV 2L7I MET B 277 UNP O28769 EXPRESSION TAG SEQADV 2L7I PHE B 291 UNP O28769 ALA 291 ENGINEERED MUTATION
SEQRES 1 A 58 GLY SER HIS MET SER THR ILE THR ARG PRO ILE ILE GLU SEQRES 2 A 58 LEU SER ASN THR PHE ASP LYS ILE ALA GLU GLY ASN LEU SEQRES 3 A 58 GLU ALA GLU VAL PRO HIS GLN ASN ARG ALA ASP GLU ILE SEQRES 4 A 58 GLY ILE LEU ALA LYS SER ILE GLU ARG LEU ARG ARG SER SEQRES 5 A 58 LEU LYS VAL ALA MET GLU SEQRES 1 B 58 GLY SER HIS MET SER THR ILE THR ARG PRO ILE ILE GLU SEQRES 2 B 58 LEU SER ASN THR PHE ASP LYS ILE ALA GLU GLY ASN LEU SEQRES 3 B 58 GLU ALA GLU VAL PRO HIS GLN ASN ARG ALA ASP GLU ILE SEQRES 4 B 58 GLY ILE LEU ALA LYS SER ILE GLU ARG LEU ARG ARG SER SEQRES 5 B 58 LEU LYS VAL ALA MET GLU
HELIX 1 1 ILE A 280 GLU A 296 1 17 HELIX 2 2 ASP A 310 GLU A 331 1 22 HELIX 3 3 ILE B 280 GLU B 296 1 17 HELIX 4 4 ASP B 310 GLU B 331 1 22
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000