10 20 30 40 50 60 70 80 2KQ8 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 30-OCT-09 2KQ8
TITLE SOLUTION NMR STRUCTURE OF A DOMAIN FROM BT9727_4915 FROM TITLE 2 BACILLUS THURINGIENSIS, NORTHEAST STRUCTURAL GENOMICS TITLE 3 CONSORTIUM TARGET BUR95A
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL WALL HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 370-430; COMPND 5 SYNONYM: POSSIBLE N-ACETYLMURAMOYL-L-ALANINE AMIDASE; COMPND 6 EC: 3.5.1.28; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS THURINGIENSIS SEROVAR SOURCE 3 KONKUKIAN; SOURCE 4 ORGANISM_TAXID: 180856; SOURCE 5 GENE: BT9727_4915; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+ MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET 21-23C
KEYWDS GFT NMR, PROTEIN STRUCTURE, NESG, PSI, SH3 DOMAIN, KEYWDS 2 HYDROLASE, STRUCTURAL GENOMICS, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR Y.HE,J.L.MILLS,Y.WU,A.ELETSKY,H.WANG,C.CICCOSANTI, AUTHOR 2 K.HAMILTON,T.B.ACTON,R.XIAO,J.K.EVERETT,G.T.MONTELIONE, AUTHOR 3 T.SZYPERSKI,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG)
REVDAT 1 26-JAN-10 2KQ8 0
JRNL AUTH Y.HE,J.L.MILLS,Y.WU,A.ELETSKY,H.WANG,C.CICCOSANTI, JRNL AUTH 2 K.HAMILTON,T.B.ACTON,R.XIAO,J.K.EVERETT, JRNL AUTH 3 G.T.MONTELIONE,T.SZYPERSKI JRNL TITL SOLUTION NMR STRUCTURE OF A DOMAIN FROM BT9727_4915 JRNL TITL 2 FROM BACILLUS THURINGIENSIS, NORTHEAST STRUCTURAL JRNL TITL 3 GENOMICS CONSORTIUM TARGET BUR95A JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, PSVS, TALOS, MOLMOL REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), BHATTACHARYA AND MONTELIONE (PSVS), REMARK 3 CORNILESCU, DELAGLIO AND BAX (TALOS), KORADI, REMARK 3 BILLETER AND WUTHRICH (MOLMOL) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2KQ8 COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-NOV-09. REMARK 100 THE RCSB ID CODE IS RCSB101437.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 4.5 REMARK 210 IONIC STRENGTH : 217.5 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.905 MM [U-98% 13C; U-98% REMARK 210 15N] BUR95A, 90 V/V H2O, 10 V/ REMARK 210 V [U-100% 2H] D2O, 20 MM REMARK 210 NH4OAC, 200 MM NACL, 5 MM REMARK 210 CACL2, 10 MM DTT, 50 UM DSS, REMARK 210 90% H2O/10% D2O; 1.041 MM [U- REMARK 210 5% 13C; U-98% 15N] BUR95A, 90 REMARK 210 V/V H2O, 10 V/V [U-100% 2H] REMARK 210 D2O, 20 MM NH4OAC, 200 MM REMARK 210 NACL, 5 MM CACL2, 10 MM DTT, REMARK 210 50 UM DSS, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C REMARK 210 HSQC; GFT (4,3)D CABCA(CO)NHN; REMARK 210 GFT (4,3)D HNNCABCA; GFT (4,3) REMARK 210 D HABCAB(CO)NHN; 3D HNCA; REMARK 210 SIMNOESY; 3D 1H-15N TOCSY; 3D REMARK 210 HNCO REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AUTOASSIGN, AUTOSTRUCTURE, REMARK 210 CYANA, NMRPIPE, XEASY, VNMRJ, REMARK 210 TOPSPIN, PROSA, NMRDRAW, SPSCAN REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HA LEU A 12 HB1 ALA A 27 1.43 REMARK 500 HG3 ARG A 15 HD13 ILE A 25 1.44 REMARK 500 HA SER A 16 HA TYR A 22 1.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 8 -74.64 67.47 REMARK 500 1 ALA A 9 -153.88 57.94 REMARK 500 1 ALA A 11 -155.44 -142.06 REMARK 500 1 LEU A 28 57.68 -152.32 REMARK 500 1 GLN A 30 104.02 63.44 REMARK 500 1 VAL A 34 126.13 76.23 REMARK 500 1 LYS A 62 -22.12 -166.88 REMARK 500 1 LEU A 63 34.36 -83.81 REMARK 500 1 HIS A 68 36.95 -95.25 REMARK 500 1 HIS A 69 87.87 66.53 REMARK 500 2 TYR A 6 -58.20 -120.24 REMARK 500 2 ILE A 7 82.21 56.72 REMARK 500 2 ASN A 8 -179.45 67.05 REMARK 500 2 VAL A 14 -67.11 -124.68 REMARK 500 2 SER A 16 74.18 45.92 REMARK 500 2 GLU A 18 115.62 -163.50 REMARK 500 2 LEU A 28 87.68 -160.75 REMARK 500 2 LYS A 33 42.70 -149.43 REMARK 500 2 SER A 38 149.98 -178.62 REMARK 500 2 HIS A 66 -20.56 -178.05 REMARK 500 2 HIS A 67 83.34 60.86 REMARK 500 3 ASP A 4 50.26 -110.33 REMARK 500 3 ALA A 9 -162.04 -107.60 REMARK 500 3 ALA A 11 -67.06 -143.34 REMARK 500 3 LEU A 12 44.94 -80.69 REMARK 500 3 VAL A 14 30.91 -95.11 REMARK 500 3 ARG A 15 47.88 -80.48 REMARK 500 3 GLU A 18 175.90 70.93 REMARK 500 3 LEU A 28 80.54 -154.09 REMARK 500 3 SER A 41 -0.55 71.80 REMARK 500 4 ASP A 4 176.97 66.08 REMARK 500 4 ALA A 9 -38.46 -174.35 REMARK 500 4 ALA A 11 146.58 69.90 REMARK 500 4 GLN A 30 59.07 -97.33 REMARK 500 4 LYS A 33 -75.94 -116.05 REMARK 500 4 VAL A 34 -29.29 174.30 REMARK 500 4 GLN A 35 127.83 72.58 REMARK 500 4 SER A 41 -54.33 75.24 REMARK 500 4 GLU A 64 142.23 74.34 REMARK 500 5 ILE A 2 -169.80 47.94 REMARK 500 5 ASP A 4 -35.95 -165.30 REMARK 500 5 ASN A 8 -59.45 73.02 REMARK 500 5 ALA A 9 -158.72 60.47 REMARK 500 5 LEU A 28 69.50 -157.10 REMARK 500 5 GLN A 30 -77.24 -148.70 REMARK 500 5 TYR A 48 77.79 -103.72 REMARK 500 5 GLU A 64 -164.29 43.59 REMARK 500 5 HIS A 67 96.87 67.23 REMARK 500 6 TYR A 6 36.25 -82.45 REMARK 500 6 ILE A 7 147.21 74.53 REMARK 500 REMARK 500 THIS ENTRY HAS 221 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BUR95A RELATED DB: TARGETDB
DBREF 2KQ8 A 2 62 UNP Q6HB52 Q6HB52_BACHK 370 430
SEQADV 2KQ8 MET A 1 UNP Q6HB52 INITIATING METHIONINE SEQADV 2KQ8 LEU A 63 UNP Q6HB52 EXPRESSION TAG SEQADV 2KQ8 GLU A 64 UNP Q6HB52 EXPRESSION TAG SEQADV 2KQ8 HIS A 65 UNP Q6HB52 EXPRESSION TAG SEQADV 2KQ8 HIS A 66 UNP Q6HB52 EXPRESSION TAG SEQADV 2KQ8 HIS A 67 UNP Q6HB52 EXPRESSION TAG SEQADV 2KQ8 HIS A 68 UNP Q6HB52 EXPRESSION TAG SEQADV 2KQ8 HIS A 69 UNP Q6HB52 EXPRESSION TAG SEQADV 2KQ8 HIS A 70 UNP Q6HB52 EXPRESSION TAG
SEQRES 1 A 70 MET ILE GLY ASP TYR TYR ILE ASN ALA SER ALA LEU ASN SEQRES 2 A 70 VAL ARG SER GLY GLU GLY THR ASN TYR ARG ILE ILE GLY SEQRES 3 A 70 ALA LEU PRO GLN GLY GLN LYS VAL GLN VAL ILE SER GLU SEQRES 4 A 70 ASN SER GLY TRP SER LYS ILE ASN TYR ASN GLY GLN THR SEQRES 5 A 70 GLY TYR ILE GLY THR ARG TYR LEU SER LYS LEU GLU HIS SEQRES 6 A 70 HIS HIS HIS HIS HIS
SHEET 1 A 3 SER A 38 ASN A 40 0 SHEET 2 A 3 TRP A 43 TYR A 48 -1 O TRP A 43 N ASN A 40 SHEET 3 A 3 GLN A 51 GLY A 56 -1 O ILE A 55 N SER A 44
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000