10 20 30 40 50 60 70 80 2KCV - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-DEC-08 2KCV
TITLE SOLUTION NMR STRUCTURE OF TETRATRICOPEPTIDE REPEAT DOMAIN TITLE 2 PROTEIN SRU_0103 FROM SALINIBACTER RUBER, NORTHEAST TITLE 3 STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET SRR115C
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TETRATRICOPEPTIDE REPEAT DOMAIN PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALINIBACTER RUBER DSM 13855; SOURCE 3 ORGANISM_TAXID: 309807; SOURCE 4 GENE: SRU_0103; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET 21-23C
KEYWDS TETRATRICOPEPTIDE REPEAT, TPR, GFT NMR, RDC, NESG, KEYWDS 2 STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, UNKNOWN FUNCTION, KEYWDS 4 NUCLEOTIDE-BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR G.LIU,P.ROSSI,D.WANG,C.NWOSU,L.OWENS,R.XIAO,J.LIU,M.C.BARAN, AUTHOR 2 G.SWAPNA,T.B.ACTON,B.ROST,G.T.MONTELIONE,NORTHEAST AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (NESG)
REVDAT 1 20-JAN-09 2KCV 0
JRNL AUTH G.LIU,G.T.MONTELIONE JRNL TITL SOLUTION NMR STRUCTURE OF TETRATRICOPEPTIDE REPEAT JRNL TITL 2 DOMAIN PROTEIN SRU_0103 FROM SALINIBACTER RUBER, JRNL TITL 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) JRNL TITL 4 TARGET SRR115C JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, CYANA 3.0, AUTOSTRUCTURE, PSVS, XEASY REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 , HUANG, TEJERO, POWERS AND MONTELIONE REMARK 3 (AUTOSTRUCTURE), BHATTACHARYA AND MONTELIONE REMARK 3 (PSVS), BARTELS ET AL. (XEASY) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2KCV COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JAN-09. REMARK 100 THE RCSB ID CODE IS RCSB100962.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298; 298 REMARK 210 PH : 6.5; 6.5 REMARK 210 IONIC STRENGTH : N.A.; N.A. REMARK 210 PRESSURE : AMBIENT ATM; AMBIENT ATM REMARK 210 SAMPLE CONTENTS : 1.37 MM [U-100% 13C; U-100% REMARK 210 15N] PROTEIN-1, 95% H2O/5% REMARK 210 D2O; 1.05 MM [U-10% 13C; U-99% REMARK 210 15N] PROTEIN-2, 95% H2O/5% REMARK 210 D2O; 1.09 MM [U-10% 13C; U-99% REMARK 210 15N] PROTEIN-3, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC, 2D 1H-15N REMARK 210 HSQC-TROSY, 3D 1H-15N NOESY, REMARK 210 3D 1H-13C NOESY-ALIPHATIC, 3D REMARK 210 1H-13C NOESY-AROMATIC, 4,3D REMARK 210 GFT CABCACONHN, 4,3D GFT REMARK 210 HNNCABCA, 4,3D GFT REMARK 210 HABCABCONHN, 3D HCCH-COSY, 2D REMARK 210 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE, INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER, VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS, CYANA 3.0, REMARK 210 AUTOSTRUCTURE, PSVS, XEASY, REMARK 210 AUTOASSIGN, NMRPIPE, TOPSPIN, REMARK 210 VNMRJ REMARK 210 METHOD USED : DISTANCE GEOMETRY, TORSION REMARK 210 ANGLE DYNAMICS, SIMULATED REMARK 210 ANNEALING, MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 3 10.68 -69.76 REMARK 500 1 TYR A 39 98.96 -68.40 REMARK 500 1 ARG A 55 47.24 -94.77 REMARK 500 2 ASP A 20 -15.40 78.11 REMARK 500 2 TYR A 39 88.96 -67.46 REMARK 500 2 ASP A 54 19.81 58.89 REMARK 500 2 ARG A 55 49.44 -93.66 REMARK 500 2 GLU A 93 -22.00 -154.73 REMARK 500 2 HIS A 95 87.50 64.82 REMARK 500 2 HIS A 98 -87.03 -63.65 REMARK 500 3 TYR A 39 92.41 -68.27 REMARK 500 3 HIS A 95 109.78 -59.58 REMARK 500 4 TYR A 39 96.37 -69.99 REMARK 500 4 LEU A 92 -70.59 -91.33 REMARK 500 4 GLU A 93 -54.94 -157.45 REMARK 500 4 HIS A 97 85.85 58.92 REMARK 500 5 ASP A 20 -19.97 77.06 REMARK 500 5 ARG A 55 41.30 -105.29 REMARK 500 5 HIS A 98 -73.68 71.38 REMARK 500 6 TYR A 39 91.96 -67.37 REMARK 500 6 ARG A 55 44.82 -108.29 REMARK 500 7 ARG A 55 42.74 -101.82 REMARK 500 7 HIS A 94 117.53 -165.44 REMARK 500 7 HIS A 96 -70.92 -87.38 REMARK 500 7 HIS A 97 94.84 -164.03 REMARK 500 8 PRO A 3 -4.69 -54.85 REMARK 500 8 TYR A 39 93.15 -66.95 REMARK 500 8 ARG A 55 57.00 -115.15 REMARK 500 8 GLU A 93 32.39 -155.60 REMARK 500 8 HIS A 95 80.37 -68.63 REMARK 500 9 ASP A 20 -1.80 71.81 REMARK 500 9 ARG A 55 52.09 -91.17 REMARK 500 10 ASP A 20 -6.65 74.72 REMARK 500 10 ARG A 55 51.04 -96.21 REMARK 500 11 ASP A 20 -8.17 76.62 REMARK 500 11 TYR A 39 91.65 -69.51 REMARK 500 11 ARG A 55 42.64 -102.17 REMARK 500 11 GLU A 93 45.68 -98.60 REMARK 500 11 HIS A 96 29.17 -79.96 REMARK 500 11 HIS A 97 28.75 -155.33 REMARK 500 11 HIS A 98 18.92 -151.06 REMARK 500 12 PRO A 3 3.91 -66.19 REMARK 500 12 ASP A 20 -9.46 74.78 REMARK 500 12 TYR A 39 86.82 -67.39 REMARK 500 12 ARG A 55 51.24 -95.51 REMARK 500 13 ARG A 55 50.86 -91.62 REMARK 500 14 ASP A 54 16.25 58.03 REMARK 500 14 LEU A 92 -80.57 -91.87 REMARK 500 14 HIS A 96 96.52 -44.35 REMARK 500 15 PRO A 3 5.76 -66.82 REMARK 500 15 ASP A 20 -0.57 71.93 REMARK 500 15 TYR A 39 99.89 -66.08 REMARK 500 15 ARG A 55 48.01 -94.44 REMARK 500 16 ASP A 20 -2.94 79.60 REMARK 500 16 TYR A 39 93.91 -65.23 REMARK 500 16 ARG A 55 55.77 -91.67 REMARK 500 17 ASP A 20 -9.56 75.06 REMARK 500 17 HIS A 97 35.19 -86.46 REMARK 500 18 ARG A 55 46.89 -91.87 REMARK 500 18 HIS A 95 103.82 -58.73 REMARK 500 18 HIS A 97 64.63 64.25 REMARK 500 19 PRO A 3 -6.28 -58.73 REMARK 500 19 ARG A 55 57.72 -90.41 REMARK 500 19 HIS A 97 -63.49 41.54 REMARK 500 19 HIS A 98 116.32 81.92 REMARK 500 20 ASP A 20 -0.44 74.00 REMARK 500 20 TYR A 39 91.16 -65.86 REMARK 500 20 HIS A 94 -175.40 165.33 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2KCL RELATED DB: PDB REMARK 900 NMR STRUCTURE REFINED WITHOUT RDC CONSTRAINTS REMARK 900 RELATED ID: 16084 RELATED DB: BMRB REMARK 900 NMR CHEMICAL SHIFTS REMARK 900 RELATED ID: SRR115C RELATED DB: TARGETDB
DBREF 2KCV A 1 91 UNP Q2S6C5 Q2S6C5_SALRD 56 146
SEQADV 2KCV LEU A 92 UNP Q2S6C5 EXPRESSION TAG SEQADV 2KCV GLU A 93 UNP Q2S6C5 EXPRESSION TAG SEQADV 2KCV HIS A 94 UNP Q2S6C5 EXPRESSION TAG SEQADV 2KCV HIS A 95 UNP Q2S6C5 EXPRESSION TAG SEQADV 2KCV HIS A 96 UNP Q2S6C5 EXPRESSION TAG SEQADV 2KCV HIS A 97 UNP Q2S6C5 EXPRESSION TAG SEQADV 2KCV HIS A 98 UNP Q2S6C5 EXPRESSION TAG SEQADV 2KCV HIS A 99 UNP Q2S6C5 EXPRESSION TAG
SEQRES 1 A 99 GLU ASP PRO GLU ASP PRO PHE THR ARG TYR ALA LEU ALA SEQRES 2 A 99 GLN GLU HIS LEU LYS HIS ASP ASN ALA SER ARG ALA LEU SEQRES 3 A 99 ALA LEU PHE GLU GLU LEU VAL GLU THR ASP PRO ASP TYR SEQRES 4 A 99 VAL GLY THR TYR TYR HIS LEU GLY LYS LEU TYR GLU ARG SEQRES 5 A 99 LEU ASP ARG THR ASP ASP ALA ILE ASP THR TYR ALA GLN SEQRES 6 A 99 GLY ILE GLU VAL ALA ARG GLU GLU GLY THR GLN LYS ASP SEQRES 7 A 99 LEU SER GLU LEU GLN ASP ALA LYS LEU LYS ALA GLU GLY SEQRES 8 A 99 LEU GLU HIS HIS HIS HIS HIS HIS
HELIX 1 1 ASP A 5 HIS A 19 1 15 HELIX 2 2 ASN A 21 ASP A 36 1 16 HELIX 3 3 TYR A 39 LEU A 53 1 15 HELIX 4 4 ARG A 55 GLU A 73 1 19 HELIX 5 5 THR A 75 GLU A 90 1 16
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000