10 20 30 40 50 60 70 80 2KCP - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RIBOSOMAL PROTEIN 24-DEC-08 2KCP
TITLE SOLUTION STRUCTURE OF 30S RIBOSOMAL PROTEIN S8E; FROM TITLE 2 METHANOTHERMOBACTER THERMAUTOTROPHICUS, NORTHEASTSTRUCTURAL TITLE 3 GENOMICS CONSORTIUM (NESG) TARGET TR71D
COMPND MOL_ID: 1; COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S8E; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMOBACTER THERMAUTOTROPHICUS SOURCE 3 STR. DELTA H; SOURCE 4 ORGANISM_TAXID: 187420; SOURCE 5 GENE: RPS8E, MTH_207; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET 21-23C
KEYWDS RPS8E, 30S RIBOSOMAL PROTEIN S8E, BETA, NESG, KEYWDS 2 RIBONUCLEOPROTEIN, RIBOSOMAL PROTEIN, STRUCTURAL GENOMICS, KEYWDS 3 PSI-2, PROTEIN STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL KEYWDS 4 GENOMICS CONSORTIUM
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR G.LIU,P.ROSSI,D.WANG,C.NWOSU,L.OWENS,R.XIAO,J.LIU,M.C.BARAN, AUTHOR 2 G.SWAPNA,T.B.ACTON,B.ROST,G.T.MONTELIONE,NORTHEAST AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (NESG)
REVDAT 1 14-JUL-09 2KCP 0
JRNL AUTH G.LIU,G.T.MONTELIONE JRNL TITL SOLUTION STRUCTURE OF 30S RIBOSOMAL PROTEIN S8E JRNL TITL 2 FROM METHANOTHERMOBACTER THERMAUTOTROPHICUS, JRNL TITL 3 NORTHEASTSTRUCTURAL GENOMICS CONSORTIUM (NESG) JRNL TITL 4 TARGET JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, CYANA, AUTOSTRUCTURE REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 , HUANG, TEJERO, POWERS AND MONTELIONE REMARK 3 (AUTOSTRUCTURE) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2KCP COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JAN-09. REMARK 100 THE RCSB ID CODE IS RCSB100956.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : N.A. REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.94 MM [U-100% 13C; U-100% REMARK 210 15N] RPS8E-1, 95% H2O/5% D2O; REMARK 210 1 MM [U-10% 13C; U-100% 15N] REMARK 210 RPS8E-2, 95% H2O/5% D2O; 0.94 REMARK 210 MM [U-100% 13C; U-100% 15N] REMARK 210 RPS8E-3, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY; 3D REMARK 210 CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HBHA(CO)NH; 3D HCCH-TOCSY; 2D REMARK 210 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS, CYANA, AUTOSTRUCTURE, REMARK 210 PSVS, AUTOASSIGN, XEASY, REMARK 210 NMRPIPE, TOPSPIN, VNMRJ REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED REMARK 210 ANNEALING, MOLECULAR DYNAMICS, REMARK 210 TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 2 -67.99 43.57 REMARK 500 1 ARG A 3 92.86 -57.00 REMARK 500 1 LEU A 7 -27.30 72.28 REMARK 500 1 ARG A 9 -72.22 -100.42 REMARK 500 1 LEU A 19 101.61 -58.57 REMARK 500 1 ALA A 20 -53.85 -159.90 REMARK 500 1 GLU A 45 34.55 -79.81 REMARK 500 1 ASN A 49 88.17 55.39 REMARK 500 1 ASN A 56 17.41 54.39 REMARK 500 1 HIS A 93 83.64 -150.09 REMARK 500 1 HIS A 97 90.92 -64.07 REMARK 500 2 ASP A 2 73.00 45.09 REMARK 500 2 VAL A 5 126.59 65.51 REMARK 500 2 LEU A 19 106.18 -35.28 REMARK 500 2 SER A 21 -41.97 74.35 REMARK 500 2 ASP A 22 97.92 -66.17 REMARK 500 2 VAL A 43 32.14 -97.00 REMARK 500 2 GLN A 79 -81.14 -77.70 REMARK 500 3 ASP A 2 -40.29 -165.29 REMARK 500 3 ARG A 4 49.80 -80.89 REMARK 500 3 THR A 10 32.41 -85.46 REMARK 500 3 ARG A 11 32.33 -78.58 REMARK 500 3 ALA A 20 -72.22 -107.19 REMARK 500 3 VAL A 44 142.70 175.80 REMARK 500 3 ASN A 49 74.95 54.15 REMARK 500 3 PHE A 52 99.48 -64.43 REMARK 500 3 THR A 74 -61.33 -108.98 REMARK 500 4 ARG A 18 -172.76 -66.41 REMARK 500 4 LEU A 19 -2.40 -56.76 REMARK 500 4 ALA A 48 -73.99 -100.62 REMARK 500 4 ASN A 49 90.60 60.74 REMARK 500 4 ILE A 58 92.24 -57.68 REMARK 500 4 THR A 74 -73.20 -110.39 REMARK 500 4 HIS A 93 35.39 -85.54 REMARK 500 4 HIS A 94 72.69 39.73 REMARK 500 5 ARG A 4 96.44 -66.42 REMARK 500 5 LEU A 7 82.66 53.43 REMARK 500 5 ARG A 11 -40.51 -160.37 REMARK 500 5 ALA A 20 -65.54 -128.80 REMARK 500 5 SER A 21 17.19 -142.77 REMARK 500 5 ASN A 46 41.03 -78.83 REMARK 500 5 ASN A 56 38.82 -145.84 REMARK 500 5 ILE A 58 88.66 -69.53 REMARK 500 5 PRO A 77 100.06 -51.80 REMARK 500 5 GLU A 92 -80.19 -53.35 REMARK 500 5 HIS A 96 105.30 -53.73 REMARK 500 6 ARG A 3 87.80 -152.63 REMARK 500 6 ARG A 4 87.30 60.12 REMARK 500 6 SER A 21 -38.57 71.70 REMARK 500 6 ALA A 48 99.02 -67.77 REMARK 500 6 ASN A 49 93.51 62.28 REMARK 500 6 PRO A 77 83.01 -63.89 REMARK 500 6 GLN A 79 103.66 -59.22 REMARK 500 6 ARG A 89 16.33 -141.43 REMARK 500 6 LEU A 91 -176.07 -61.66 REMARK 500 6 GLU A 92 108.08 -46.07 REMARK 500 6 HIS A 95 -23.80 68.60 REMARK 500 7 ARG A 4 103.69 -163.99 REMARK 500 7 ILE A 8 91.39 -65.10 REMARK 500 7 LEU A 19 107.12 -164.28 REMARK 500 7 SER A 21 -75.62 -155.51 REMARK 500 7 VAL A 44 99.25 -65.81 REMARK 500 7 ASN A 46 -30.83 -174.22 REMARK 500 7 GLN A 79 97.67 -57.59 REMARK 500 7 ASP A 80 17.08 56.82 REMARK 500 8 VAL A 5 11.61 48.74 REMARK 500 8 LEU A 19 -9.69 -58.64 REMARK 500 8 ASN A 46 99.23 -63.61 REMARK 500 8 ALA A 48 20.85 -79.64 REMARK 500 8 ARG A 55 -13.27 77.40 REMARK 500 8 GLN A 79 -74.96 -45.42 REMARK 500 8 GLU A 92 97.01 -58.78 REMARK 500 9 ARG A 4 78.86 61.82 REMARK 500 9 LEU A 19 109.00 -160.94 REMARK 500 9 ALA A 20 79.93 -104.35 REMARK 500 9 PHE A 52 84.46 -66.43 REMARK 500 9 PRO A 77 94.94 -61.56 REMARK 500 9 GLU A 90 -64.00 -120.82 REMARK 500 9 LEU A 91 -158.29 -97.44 REMARK 500 9 HIS A 93 31.50 -98.17 REMARK 500 9 HIS A 94 89.98 -69.71 REMARK 500 9 HIS A 96 125.93 -175.43 REMARK 500 10 LEU A 7 39.02 -83.51 REMARK 500 10 THR A 10 87.78 -67.75 REMARK 500 10 LEU A 19 135.71 -176.87 REMARK 500 10 VAL A 44 139.28 -178.87 REMARK 500 10 ASN A 49 107.63 62.74 REMARK 500 10 PRO A 50 101.04 -50.59 REMARK 500 10 PHE A 52 18.02 57.26 REMARK 500 10 ILE A 58 98.17 -69.45 REMARK 500 10 ASP A 80 -69.81 63.74 REMARK 500 11 THR A 10 84.42 -69.84 REMARK 500 11 LEU A 19 129.02 -177.55 REMARK 500 11 ALA A 20 111.99 -167.19 REMARK 500 11 SER A 21 -44.37 72.12 REMARK 500 11 ASN A 46 90.62 -67.54 REMARK 500 11 PRO A 77 40.14 -75.34 REMARK 500 11 GLN A 79 -63.95 -93.81 REMARK 500 11 GLU A 92 -64.16 -106.06 REMARK 500 11 HIS A 95 -46.70 -177.38 REMARK 500 12 VAL A 17 83.63 -62.99 REMARK 500 12 ARG A 18 -172.70 55.50 REMARK 500 12 ALA A 20 -76.79 -155.59 REMARK 500 12 ASN A 46 39.73 -84.10 REMARK 500 12 HIS A 51 -159.74 -79.87 REMARK 500 12 PHE A 52 72.07 -69.68 REMARK 500 12 SER A 75 -169.63 -104.56 REMARK 500 13 THR A 10 -76.38 -87.99 REMARK 500 13 ARG A 11 124.90 68.98 REMARK 500 13 SER A 21 -45.90 74.43 REMARK 500 13 GLU A 45 -165.21 -100.42 REMARK 500 13 HIS A 51 -13.89 72.02 REMARK 500 13 VAL A 53 136.27 68.99 REMARK 500 13 PRO A 77 99.69 -47.56 REMARK 500 13 GLN A 79 105.32 -58.16 REMARK 500 13 GLU A 90 -72.35 -122.21 REMARK 500 13 HIS A 96 -74.70 -55.59 REMARK 500 14 VAL A 5 87.27 -68.39 REMARK 500 14 THR A 10 105.76 -37.41 REMARK 500 14 LEU A 19 129.17 -174.23 REMARK 500 14 SER A 21 -52.64 74.60 REMARK 500 14 GLU A 45 -167.10 -72.73 REMARK 500 14 ASN A 46 85.58 -65.61 REMARK 500 14 PRO A 77 107.89 -39.23 REMARK 500 14 HIS A 93 7.95 58.48 REMARK 500 15 ALA A 20 -60.52 -152.18 REMARK 500 15 ASN A 46 87.17 -62.70 REMARK 500 15 ASN A 49 94.39 65.31 REMARK 500 15 PRO A 50 44.53 -73.78 REMARK 500 15 VAL A 53 94.00 -67.39 REMARK 500 15 THR A 74 -63.04 -109.86 REMARK 500 15 HIS A 93 108.74 -57.83 REMARK 500 15 HIS A 97 -67.72 63.96 REMARK 500 16 LYS A 16 91.69 -175.95 REMARK 500 16 VAL A 17 167.83 48.88 REMARK 500 16 ALA A 20 -73.35 -139.32 REMARK 500 16 ASN A 46 72.48 60.51 REMARK 500 16 THR A 47 -73.10 -89.79 REMARK 500 16 ALA A 48 -140.73 -92.13 REMARK 500 16 PHE A 52 43.31 -104.97 REMARK 500 16 GLU A 92 91.59 -64.95 REMARK 500 16 HIS A 95 124.05 -174.87 REMARK 500 17 ASN A 14 -74.37 -153.31 REMARK 500 17 LEU A 19 4.67 -64.01 REMARK 500 17 GLU A 45 -167.13 -75.47 REMARK 500 17 THR A 47 -178.66 -177.00 REMARK 500 17 ALA A 48 -57.98 -121.88 REMARK 500 17 ASN A 49 88.21 -161.47 REMARK 500 17 ASN A 56 62.28 62.73 REMARK 500 17 HIS A 94 37.09 -77.44 REMARK 500 17 HIS A 95 76.64 -112.97 REMARK 500 18 VAL A 5 42.95 -79.18 REMARK 500 18 ARG A 11 115.64 -162.28 REMARK 500 18 SER A 21 -45.26 72.20 REMARK 500 18 GLU A 45 32.05 -75.71 REMARK 500 18 PHE A 52 1.90 -69.05 REMARK 500 18 ARG A 55 93.16 -68.94 REMARK 500 18 PRO A 77 97.24 -63.52 REMARK 500 19 ARG A 18 -68.91 45.90 REMARK 500 19 ASP A 22 -77.03 -96.05 REMARK 500 20 ASN A 14 90.51 -67.41 REMARK 500 20 ALA A 20 -54.95 -124.11 REMARK 500 20 ASP A 22 105.63 -59.36 REMARK 500 20 GLU A 45 -157.57 -91.53 REMARK 500 20 ARG A 54 -160.79 -106.84 REMARK 500 20 ASN A 56 49.17 -77.68 REMARK 500 20 THR A 74 -62.61 -98.79 REMARK 500 20 GLN A 79 100.91 -59.21 REMARK 500 20 ASP A 80 19.31 57.41 REMARK 500 20 GLU A 92 109.78 -58.55 REMARK 500 20 HIS A 95 105.80 -47.21 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16091 RELATED DB: BMRB REMARK 900 RELATED ID: TR71D RELATED DB: TARGETDB
DBREF 2KCP A 1 90 UNP O26309 RS8E_METTH 38 127
SEQADV 2KCP LEU A 91 UNP O26309 EXPRESSION TAG SEQADV 2KCP GLU A 92 UNP O26309 EXPRESSION TAG SEQADV 2KCP HIS A 93 UNP O26309 EXPRESSION TAG SEQADV 2KCP HIS A 94 UNP O26309 EXPRESSION TAG SEQADV 2KCP HIS A 95 UNP O26309 EXPRESSION TAG SEQADV 2KCP HIS A 96 UNP O26309 EXPRESSION TAG SEQADV 2KCP HIS A 97 UNP O26309 EXPRESSION TAG SEQADV 2KCP HIS A 98 UNP O26309 EXPRESSION TAG
SEQRES 1 A 98 GLY ASP ARG ARG VAL ARG LEU ILE ARG THR ARG GLY GLY SEQRES 2 A 98 ASN THR LYS VAL ARG LEU ALA SER ASP THR ARG ILE ASN SEQRES 3 A 98 VAL VAL ASP PRO GLU THR GLY LYS VAL GLU ILE ALA GLU SEQRES 4 A 98 ILE ARG ASN VAL VAL GLU ASN THR ALA ASN PRO HIS PHE SEQRES 5 A 98 VAL ARG ARG ASN ILE ILE THR ARG GLY ALA VAL VAL GLU SEQRES 6 A 98 THR ASN LEU GLY ASN VAL ARG VAL THR SER ARG PRO GLY SEQRES 7 A 98 GLN ASP GLY VAL ILE ASN GLY VAL LEU ILE ARG GLU LEU SEQRES 8 A 98 GLU HIS HIS HIS HIS HIS HIS
HELIX 1 1 GLY A 78 VAL A 82 5 5
SHEET 1 A 6 VAL A 35 ALA A 38 0 SHEET 2 A 6 ILE A 25 VAL A 28 -1 N VAL A 27 O GLU A 36 SHEET 3 A 6 ASN A 84 ILE A 88 1 O GLY A 85 N ASN A 26 SHEET 4 A 6 ASN A 70 VAL A 73 -1 N ASN A 70 O ILE A 88 SHEET 5 A 6 VAL A 63 THR A 66 -1 N VAL A 64 O VAL A 71 SHEET 6 A 6 ILE A 40 ASN A 42 -1 N ARG A 41 O GLU A 65
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000