10 20 30 40 50 60 70 80 2KCN - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric Unit
HEADER ANTIFUNGAL PROTEIN 23-DEC-08 2KCN
TITLE SOLUTION STRUCTURE OF THE ANTIFUNGAL PROTEIN PAF FROM TITLE 2 PENICILLIUM CHRYSOGENUM
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIFUNGAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 38-92; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PENICILLIUM CHRYSOGENUM; SOURCE 3 ORGANISM_COMMON: PENICILLIUM NOTATUM; SOURCE 4 ORGANISM_TAXID: 5076; SOURCE 5 GENE: PAF
KEYWDS ANTIFUNGAL PROTEIN PAF
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR G.BATTA,T.BARNA,Z.GASPARI,S.SANDOR,K.E.KOVER,U.BINDER, AUTHOR 2 B.SARG,L.KAISERER,A.K.CHHILLAR,A.EIGENTLER,E.LEITER, AUTHOR 3 N.HEGEDUS,I.POCSI,H.LINDNER,F.MARX
REVDAT 1 21-JUL-09 2KCN 0
JRNL AUTH G.BATTA,T.BARNA,Z.GASPARI,S.SANDOR,K.E.KOVER, JRNL AUTH 2 U.BINDER,B.SARG,L.KAISERER,A.K.CHHILLAR, JRNL AUTH 3 A.EIGENTLER,E.LEITER,N.HEGEDUS,I.POCSI,H.LINDNER, JRNL AUTH 4 F.MARX JRNL TITL FUNCTIONAL ASPECTS OF THE SOLUTION STRUCTURE AND JRNL TITL 2 DYNAMICS OF PAF--A HIGHLY-STABLE ANTIFUNGAL PROTEIN JRNL TITL 3 FROM PENICILLIUM CHRYSOGENUM JRNL REF FEBS J. V. 276 2875 2009 JRNL REFN ISSN 1742-464X JRNL PMID 19459942 JRNL DOI 10.1111/J.1742-4658.2009.07011.X
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0 REMARK 3 AUTHORS : HERRMANN, GUNTERT, WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2KCN COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-DEC-08. REMARK 100 THE RCSB ID CODE IS RCSB100954.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 304 REMARK 210 PH : 5.0 REMARK 210 IONIC STRENGTH : 0.04 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.6MM [U-100% 15N] PAF-1, 95% REMARK 210 H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-1H REMARK 210 TOCSY; 2D 1H-1H NOESY; 2D 1H- REMARK 210 13C HSQC; 3D 1H-15N NOESY; 3D REMARK 210 1H-15N TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.0 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED FROM THE 2D NOESY (130MS REMARK 210 MIXING TIME) USING ATNOS/CANDID/CYANA 2.0
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 19 -69.42 72.12 REMARK 500 1 ALA A 20 44.81 -173.96 REMARK 500 1 PRO A 29 82.57 -69.81 REMARK 500 1 LYS A 34 71.20 -179.40 REMARK 500 1 CYS A 36 153.27 64.03 REMARK 500 1 THR A 37 39.12 -154.76 REMARK 500 1 LYS A 38 130.74 178.33 REMARK 500 1 ASN A 41 -76.53 -61.20 REMARK 500 1 LYS A 42 143.69 -179.30 REMARK 500 1 ASN A 49 39.35 -151.68 REMARK 500 2 LYS A 15 66.49 -100.72 REMARK 500 2 ASP A 19 -69.32 72.17 REMARK 500 2 ALA A 20 52.10 -170.21 REMARK 500 2 ASP A 23 108.59 -51.97 REMARK 500 2 PRO A 29 86.24 -69.78 REMARK 500 2 ASP A 32 86.10 63.51 REMARK 500 2 ASN A 33 -35.93 -177.00 REMARK 500 2 LYS A 34 57.99 -175.70 REMARK 500 2 THR A 37 39.84 -148.87 REMARK 500 2 ASN A 40 75.01 61.77 REMARK 500 2 ASN A 41 -78.64 -84.42 REMARK 500 2 LYS A 42 143.98 -179.34 REMARK 500 2 ASN A 49 39.22 -151.60 REMARK 500 3 ASP A 19 -69.43 72.09 REMARK 500 3 ALA A 20 42.35 -175.28 REMARK 500 3 PRO A 29 80.43 -69.71 REMARK 500 3 ASN A 33 -34.73 -179.85 REMARK 500 3 LYS A 34 60.27 -175.59 REMARK 500 3 THR A 37 39.76 -154.11 REMARK 500 3 LYS A 38 155.03 179.64 REMARK 500 3 ASN A 40 74.34 61.89 REMARK 500 3 ASN A 41 -78.97 -84.49 REMARK 500 3 LYS A 42 143.27 -178.71 REMARK 500 3 ASN A 49 39.13 -150.52 REMARK 500 4 LYS A 11 105.29 -179.67 REMARK 500 4 ASP A 19 -69.52 71.97 REMARK 500 4 ALA A 20 39.92 -177.12 REMARK 500 4 ILE A 26 122.46 -173.91 REMARK 500 4 PRO A 29 78.92 -69.77 REMARK 500 4 ASN A 33 -47.37 -178.43 REMARK 500 4 LYS A 34 58.08 -158.24 REMARK 500 4 ASN A 41 -167.23 -60.81 REMARK 500 4 CYS A 43 -169.95 -116.93 REMARK 500 4 ASN A 49 39.11 -151.28 REMARK 500 5 LYS A 11 108.67 -179.37 REMARK 500 5 ASP A 19 -69.44 72.21 REMARK 500 5 ALA A 20 40.88 -173.85 REMARK 500 5 PRO A 29 76.68 -69.78 REMARK 500 5 LYS A 30 46.53 -151.11 REMARK 500 5 ASN A 33 -34.75 -179.38 REMARK 500 5 LYS A 34 56.23 -174.81 REMARK 500 5 CYS A 36 145.02 64.54 REMARK 500 5 THR A 37 37.62 -154.83 REMARK 500 5 LYS A 38 131.75 -177.96 REMARK 500 5 ASN A 40 75.66 62.38 REMARK 500 5 ASN A 41 -166.13 -79.06 REMARK 500 5 ASN A 49 39.01 -150.38 REMARK 500 6 LYS A 15 55.16 -95.36 REMARK 500 6 ASP A 19 -69.49 72.10 REMARK 500 6 ALA A 20 40.02 -178.36 REMARK 500 6 ILE A 26 37.82 -168.97 REMARK 500 6 LYS A 27 178.18 55.08 REMARK 500 6 PRO A 29 71.43 -69.75 REMARK 500 6 ASP A 32 85.55 51.52 REMARK 500 6 ASN A 33 -34.95 -179.88 REMARK 500 6 LYS A 34 67.78 -175.27 REMARK 500 6 LYS A 38 145.75 -170.22 REMARK 500 6 ASN A 41 -168.38 -60.86 REMARK 500 6 THR A 44 130.57 -178.64 REMARK 500 6 ASN A 49 39.47 -152.28 REMARK 500 7 LYS A 15 56.77 -94.79 REMARK 500 7 ASP A 19 -69.50 72.15 REMARK 500 7 ALA A 20 39.99 -175.75 REMARK 500 7 PRO A 29 86.63 -69.73 REMARK 500 7 ASP A 32 87.27 63.48 REMARK 500 7 ASN A 33 -35.53 -178.36 REMARK 500 7 LYS A 34 58.56 -175.54 REMARK 500 7 THR A 37 38.94 -158.47 REMARK 500 7 LYS A 38 126.42 179.50 REMARK 500 7 ASN A 40 70.88 59.58 REMARK 500 7 ASN A 41 -79.01 -92.40 REMARK 500 7 LYS A 42 142.52 179.05 REMARK 500 7 ASN A 49 39.08 -149.84 REMARK 500 8 LYS A 9 -82.69 63.92 REMARK 500 8 ASP A 19 -72.08 71.41 REMARK 500 8 ALA A 20 39.89 178.64 REMARK 500 8 PRO A 29 95.47 -69.80 REMARK 500 8 LYS A 30 64.64 -152.13 REMARK 500 8 ASP A 32 75.52 51.77 REMARK 500 8 ASN A 33 -36.58 -174.46 REMARK 500 8 LYS A 34 64.86 -176.27 REMARK 500 8 THR A 37 41.25 -154.29 REMARK 500 8 LYS A 38 120.27 179.95 REMARK 500 8 ASN A 40 67.20 60.12 REMARK 500 8 ASN A 41 -78.45 -84.49 REMARK 500 8 LYS A 42 138.49 -179.44 REMARK 500 8 ASN A 49 39.12 -150.12 REMARK 500 9 LYS A 11 117.54 -160.53 REMARK 500 9 TYR A 16 -169.81 -121.79 REMARK 500 9 ASP A 19 -69.66 72.05 REMARK 500 9 ALA A 20 49.26 -176.36 REMARK 500 9 PRO A 29 66.87 -69.80 REMARK 500 9 ASN A 33 -50.00 -135.58 REMARK 500 9 LYS A 34 55.02 -177.03 REMARK 500 9 ASN A 40 77.47 63.69 REMARK 500 9 ASN A 41 -79.64 -87.08 REMARK 500 9 LYS A 42 142.83 -179.12 REMARK 500 9 ASN A 49 39.30 -151.55 REMARK 500 9 ASN A 50 72.50 50.70 REMARK 500 10 LYS A 11 127.95 -174.09 REMARK 500 10 ASP A 19 -69.42 71.99 REMARK 500 10 ALA A 20 61.05 -178.17 REMARK 500 10 LYS A 30 46.21 -148.39 REMARK 500 10 LYS A 34 75.49 178.25 REMARK 500 10 THR A 37 39.01 -154.31 REMARK 500 10 LYS A 38 127.42 178.08 REMARK 500 10 ASN A 40 72.06 59.61 REMARK 500 10 ASN A 41 -79.63 -89.70 REMARK 500 10 LYS A 42 144.55 179.35 REMARK 500 10 ASN A 49 39.03 -149.41 REMARK 500 11 LYS A 11 130.54 -175.46 REMARK 500 11 ASP A 19 -69.56 71.99 REMARK 500 11 ALA A 20 41.51 -171.48 REMARK 500 11 ILE A 26 39.67 -169.84 REMARK 500 11 LYS A 27 172.45 56.56 REMARK 500 11 PRO A 29 84.64 -69.66 REMARK 500 11 LYS A 30 60.96 -153.31 REMARK 500 11 ASP A 32 82.05 51.26 REMARK 500 11 ASN A 33 -34.68 179.82 REMARK 500 11 LYS A 34 67.20 -169.59 REMARK 500 11 THR A 37 40.34 -154.30 REMARK 500 11 LYS A 38 120.90 179.02 REMARK 500 11 ASN A 41 -80.74 -83.88 REMARK 500 11 LYS A 42 143.67 -179.71 REMARK 500 11 THR A 44 145.88 -178.38 REMARK 500 11 ASN A 49 39.23 -151.40 REMARK 500 12 ASP A 19 -81.72 64.15 REMARK 500 12 ALA A 20 47.82 -170.76 REMARK 500 12 PRO A 29 68.24 -69.75 REMARK 500 12 LYS A 30 54.61 -144.30 REMARK 500 12 PHE A 31 41.06 -99.78 REMARK 500 12 ASP A 32 -25.89 174.73 REMARK 500 12 LYS A 34 72.71 -179.58 REMARK 500 12 CYS A 36 159.25 62.12 REMARK 500 12 THR A 37 38.91 -174.81 REMARK 500 12 LYS A 38 118.01 176.93 REMARK 500 12 ASN A 40 71.58 64.35 REMARK 500 12 ASN A 41 -79.48 -81.76 REMARK 500 12 LYS A 42 143.60 -179.43 REMARK 500 12 ASN A 49 39.25 -151.48 REMARK 500 13 ASP A 19 -71.66 71.50 REMARK 500 13 ALA A 20 39.87 178.92 REMARK 500 13 PRO A 29 85.12 -69.80 REMARK 500 13 PHE A 31 -164.57 -73.11 REMARK 500 13 ASP A 32 90.85 -49.11 REMARK 500 13 ASN A 33 -51.58 177.65 REMARK 500 13 LYS A 34 60.36 -153.57 REMARK 500 13 THR A 37 47.08 -151.27 REMARK 500 13 LYS A 38 146.66 -175.83 REMARK 500 13 ASN A 41 -166.85 -61.13 REMARK 500 13 ASN A 49 38.17 -146.54 REMARK 500 14 LYS A 9 -74.68 -55.11 REMARK 500 14 LYS A 15 59.79 -104.07 REMARK 500 14 ASP A 19 -70.24 71.71 REMARK 500 14 ALA A 20 39.90 -179.16 REMARK 500 14 PRO A 29 64.82 -69.81 REMARK 500 14 LYS A 30 45.23 -142.18 REMARK 500 14 LYS A 34 64.05 -175.58 REMARK 500 14 CYS A 36 153.64 64.20 REMARK 500 14 THR A 37 39.02 -148.76 REMARK 500 14 LYS A 38 130.20 177.98 REMARK 500 14 ASN A 41 -169.54 -60.23 REMARK 500 14 ASN A 49 38.08 -152.93 REMARK 500 15 LYS A 11 104.99 -179.51 REMARK 500 15 ASP A 19 -69.69 71.83 REMARK 500 15 ALA A 20 40.14 -178.22 REMARK 500 15 PRO A 29 64.84 -69.76 REMARK 500 15 LYS A 30 53.01 -144.39 REMARK 500 15 PHE A 31 39.70 -98.98 REMARK 500 15 ASP A 32 -26.16 174.89 REMARK 500 15 LYS A 34 69.83 -176.01 REMARK 500 15 ASN A 41 -77.39 -51.44 REMARK 500 15 LYS A 42 148.71 179.78 REMARK 500 15 ASN A 49 38.80 -151.27 REMARK 500 16 LYS A 11 113.30 -179.95 REMARK 500 16 ASP A 19 -69.47 72.12 REMARK 500 16 ALA A 20 41.34 -175.51 REMARK 500 16 PRO A 29 72.24 -69.68 REMARK 500 16 PHE A 31 -164.12 -73.11 REMARK 500 16 ASP A 32 91.25 -47.05 REMARK 500 16 ASN A 33 -52.55 175.87 REMARK 500 16 LYS A 34 56.12 -149.38 REMARK 500 16 THR A 37 39.92 -146.42 REMARK 500 16 LYS A 38 122.97 179.26 REMARK 500 16 ASN A 40 75.37 62.59 REMARK 500 16 ASN A 41 -79.38 -88.31 REMARK 500 16 LYS A 42 130.89 -179.47 REMARK 500 16 THR A 44 149.05 -172.43 REMARK 500 16 ASN A 49 39.22 -151.47 REMARK 500 17 LYS A 11 96.44 -179.54 REMARK 500 17 ASP A 19 -69.75 72.02 REMARK 500 17 ALA A 20 56.62 -178.47 REMARK 500 17 PRO A 29 75.31 -69.77 REMARK 500 17 ASP A 32 68.21 64.09 REMARK 500 17 ASN A 33 -49.72 -162.33 REMARK 500 17 LYS A 34 55.47 -176.88 REMARK 500 17 ASN A 40 70.66 54.08 REMARK 500 17 ASN A 41 -82.62 -79.89 REMARK 500 17 LYS A 42 119.11 177.67 REMARK 500 17 ASN A 49 39.83 -150.76 REMARK 500 18 ASP A 19 -70.92 71.67 REMARK 500 18 ALA A 20 40.99 -179.41 REMARK 500 18 ASP A 23 96.96 -59.90 REMARK 500 18 LYS A 30 49.91 -163.61 REMARK 500 18 ASP A 32 64.77 66.37 REMARK 500 18 ASN A 33 -32.81 179.88 REMARK 500 18 THR A 37 41.22 -154.79 REMARK 500 18 LYS A 38 125.50 -179.82 REMARK 500 18 ASN A 40 62.19 61.15 REMARK 500 18 ASN A 41 -164.36 -70.48 REMARK 500 18 ASN A 49 39.75 -155.02 REMARK 500 19 ASP A 19 -70.13 71.81 REMARK 500 19 ALA A 20 63.62 -178.92 REMARK 500 19 PRO A 29 79.19 -69.73 REMARK 500 19 ASP A 32 73.68 56.82 REMARK 500 19 ASN A 33 -48.18 -178.45 REMARK 500 19 LYS A 34 59.58 -156.62 REMARK 500 19 LYS A 38 112.88 -160.72 REMARK 500 19 ASN A 41 -169.80 -60.34 REMARK 500 19 ASN A 49 39.58 -155.50 REMARK 500 19 ASN A 50 69.65 60.28 REMARK 500 20 LYS A 11 108.88 -174.72 REMARK 500 20 ASP A 19 -69.40 71.98 REMARK 500 20 ALA A 20 43.76 -173.84 REMARK 500 20 ILE A 26 38.55 -154.08 REMARK 500 20 LYS A 27 179.83 54.57 REMARK 500 20 PRO A 29 70.97 -69.77 REMARK 500 20 ASP A 32 86.18 51.42 REMARK 500 20 ASN A 33 -40.25 -179.33 REMARK 500 20 LYS A 34 66.48 -174.97 REMARK 500 20 THR A 37 39.52 -160.05 REMARK 500 20 ASN A 41 -75.60 -54.75 REMARK 500 20 LYS A 42 146.95 178.09 REMARK 500 20 ASN A 49 37.39 -146.78 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16087 RELATED DB: BMRB
DBREF 2KCN A 1 55 UNP Q01701 Q01701_PENCH 38 92
SEQRES 1 A 55 ALA LYS TYR THR GLY LYS CYS THR LYS SER LYS ASN GLU SEQRES 2 A 55 CYS LYS TYR LYS ASN ASP ALA GLY LYS ASP THR PHE ILE SEQRES 3 A 55 LYS CYS PRO LYS PHE ASP ASN LYS LYS CYS THR LYS ASP SEQRES 4 A 55 ASN ASN LYS CYS THR VAL ASP THR TYR ASN ASN ALA VAL SEQRES 5 A 55 ASP CYS ASP
SHEET 1 A 3 LYS A 2 GLY A 5 0 SHEET 2 A 3 CYS A 43 ASP A 46 -1 O VAL A 45 N TYR A 3 SHEET 3 A 3 ALA A 51 CYS A 54 -1 O ASP A 53 N THR A 44 SHEET 1 B 2 GLU A 13 ASN A 18 0 SHEET 2 B 2 LYS A 22 LYS A 27 -1 O ILE A 26 N CYS A 14
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000