10 20 30 40 50 60 70 80 2KB0 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SIGNALING PROTEIN 18-NOV-08 2KB0
TITLE CDC42(T35A)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL DIVISION CONTROL PROTEIN 42 HOMOLOG; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: G25K GTP-BINDING PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CDC42; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-15B
KEYWDS GLOBULAR, FOLDED, SWITCH 1, MUTATION, RAS, ALTERNATIVE KEYWDS 2 SPLICING, CELL MEMBRANE, GTP-BINDING, LIPOPROTEIN, KEYWDS 3 MEMBRANE, METHYLATION, NUCLEOTIDE-BINDING, PRENYLATION, KEYWDS 4 SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 12
AUTHOR P.D.ADAMS,R.E.OSWALD,R.MCFEETERS
REVDAT 1 01-DEC-09 2KB0 0
JRNL AUTH P.ADAMS,R.OSWALD,R.MCFEETERS JRNL TITL CDC42(T35A) JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR_NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NIH-XPLOR USED TO CALCULATE REMARK 3 STRUCTURES
REMARK 4 REMARK 4 2KB0 COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-DEC-08. REMARK 100 THE RCSB ID CODE IS RCSB100897.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.4 MM [U-100% 13C; U-100% REMARK 210 15N] CDC42(T35A), 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-1H REMARK 210 TOCSY; 3D HNCO; 3D HNCA; 3D REMARK 210 HN(CO)CA; 3D HNCACB; 3D HCCH- REMARK 210 TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AMX REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR_NIH REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 18 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 12 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 61 HH21 ARG A 66 1.38 REMARK 500 O ILE A 46 H GLU A 49 1.44 REMARK 500 O ILE A 117 H LEU A 119 1.48 REMARK 500 OD2 ASP A 118 HG SER A 158 1.54 REMARK 500 O GLN A 61 H ASP A 63 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 13 102.78 53.47 REMARK 500 1 THR A 25 -1.27 -166.44 REMARK 500 1 ASN A 26 118.90 92.21 REMARK 500 1 LYS A 27 58.34 -179.60 REMARK 500 1 SER A 30 37.55 35.65 REMARK 500 1 GLU A 31 -37.21 -38.22 REMARK 500 1 ALA A 35 -104.79 -64.50 REMARK 500 1 GLN A 61 -104.66 44.29 REMARK 500 1 GLU A 62 -67.10 61.49 REMARK 500 1 LEU A 67 75.34 56.79 REMARK 500 1 SER A 71 4.99 52.11 REMARK 500 1 TYR A 72 82.18 -176.71 REMARK 500 1 CYS A 105 84.90 59.11 REMARK 500 1 PRO A 106 89.67 -48.56 REMARK 500 1 GLN A 116 19.10 83.71 REMARK 500 1 ILE A 117 -165.02 -61.30 REMARK 500 1 ASP A 118 -60.48 60.65 REMARK 500 1 ARG A 120 45.99 31.65 REMARK 500 1 ASP A 121 75.56 70.26 REMARK 500 1 ASP A 122 160.49 -42.83 REMARK 500 1 LYS A 135 139.45 65.46 REMARK 500 1 LEU A 149 -87.92 -112.43 REMARK 500 1 LYS A 150 52.67 -152.59 REMARK 500 1 GLN A 162 13.14 -69.85 REMARK 500 2 ALA A 13 -67.08 -177.32 REMARK 500 2 VAL A 14 -119.56 54.43 REMARK 500 2 GLU A 31 -31.46 64.65 REMARK 500 2 TYR A 32 -82.29 -58.36 REMARK 500 2 VAL A 33 60.05 73.74 REMARK 500 2 ALA A 35 56.08 -91.34 REMARK 500 2 PHE A 37 -102.63 -160.56 REMARK 500 2 ASN A 39 73.27 89.86 REMARK 500 2 ALA A 59 -21.54 -166.99 REMARK 500 2 GLU A 62 -161.88 -76.18 REMARK 500 2 ASP A 63 11.99 -62.98 REMARK 500 2 ASP A 65 -14.97 -43.86 REMARK 500 2 SER A 71 75.56 35.55 REMARK 500 2 GLN A 116 15.42 85.66 REMARK 500 2 ILE A 117 -158.96 -63.15 REMARK 500 2 ASP A 118 -57.03 56.97 REMARK 500 2 LYS A 133 -50.68 -171.23 REMARK 500 2 GLN A 134 -119.79 -143.86 REMARK 500 2 PRO A 136 174.26 -58.33 REMARK 500 3 THR A 25 -109.61 -112.26 REMARK 500 3 ASN A 26 39.15 164.64 REMARK 500 3 GLU A 31 17.70 40.38 REMARK 500 3 GLU A 49 131.23 155.43 REMARK 500 3 ASP A 63 24.51 -63.31 REMARK 500 3 ARG A 68 165.73 55.84 REMARK 500 3 PRO A 69 -1.96 -48.28 REMARK 500 REMARK 500 THIS ENTRY HAS 219 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15424 RELATED DB: BMRB
DBREF 2KB0 A 1 178 UNP P60953 CDC42_HUMAN 1 178
SEQADV 2KB0 ALA A 35 UNP P60953 THR 35 ENGINEERED SEQADV 2KB0 LYS A 163 UNP P60953 ARG 163 VARIANT
SEQRES 1 A 178 MET GLN THR ILE LYS CYS VAL VAL VAL GLY ASP GLY ALA SEQRES 2 A 178 VAL GLY LYS THR CYS LEU LEU ILE SER TYR THR THR ASN SEQRES 3 A 178 LYS PHE PRO SER GLU TYR VAL PRO ALA VAL PHE ASP ASN SEQRES 4 A 178 TYR ALA VAL THR VAL MET ILE GLY GLY GLU PRO TYR THR SEQRES 5 A 178 LEU GLY LEU PHE ASP THR ALA GLY GLN GLU ASP TYR ASP SEQRES 6 A 178 ARG LEU ARG PRO LEU SER TYR PRO GLN THR ASP VAL PHE SEQRES 7 A 178 LEU VAL CYS PHE SER VAL VAL SER PRO SER SER PHE GLU SEQRES 8 A 178 ASN VAL LYS GLU LYS TRP VAL PRO GLU ILE THR HIS HIS SEQRES 9 A 178 CYS PRO LYS THR PRO PHE LEU LEU VAL GLY THR GLN ILE SEQRES 10 A 178 ASP LEU ARG ASP ASP PRO SER THR ILE GLU LYS LEU ALA SEQRES 11 A 178 LYS ASN LYS GLN LYS PRO ILE THR PRO GLU THR ALA GLU SEQRES 12 A 178 LYS LEU ALA ARG ASP LEU LYS ALA VAL LYS TYR VAL GLU SEQRES 13 A 178 CYS SER ALA LEU THR GLN LYS GLY LEU LYS ASN VAL PHE SEQRES 14 A 178 ASP GLU ALA ILE LEU ALA ALA LEU GLU
HELIX 1 1 GLY A 15 ASN A 26 1 12 HELIX 2 2 PRO A 87 LYS A 96 1 10 HELIX 3 3 LYS A 96 CYS A 105 1 10 HELIX 4 4 ASP A 122 LYS A 133 1 12 HELIX 5 5 THR A 138 ARG A 147 1 10 HELIX 6 6 GLY A 164 GLU A 178 1 15
SHEET 1 A 6 ALA A 41 VAL A 44 0 SHEET 2 A 6 TYR A 51 PHE A 56 -1 O LEU A 53 N VAL A 42 SHEET 3 A 6 ILE A 4 GLY A 10 1 N VAL A 8 O PHE A 56 SHEET 4 A 6 VAL A 77 SER A 83 1 O VAL A 77 N VAL A 7 SHEET 5 A 6 PHE A 110 THR A 115 1 O THR A 115 N PHE A 82 SHEET 6 A 6 LYS A 153 GLU A 156 1 O VAL A 155 N GLY A 114
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000