10 20 30 40 50 60 70 80 2K4P - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SIGNALING PROTEIN 16-JUN-08 2K4P
TITLE SOLUTION STRUCTURE OF SHIP2-SAM
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHATIDYLINOSITOL-3,4,5-TRISPHOSPHATE 5- COMPND 3 PHOSPHATASE 2; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: STERILE ALPHA MOTIF DOMAIN; COMPND 6 SYNONYM: SH2 DOMAIN-CONTAINING INOSITOL-5'-PHOSPHATASE 2, COMPND 7 SHIP-2, INOSITOL POLYPHOSPHATE PHOSPHATASE-LIKE PROTEIN 1, COMPND 8 INPPL-1, PROTEIN 51C; COMPND 9 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: INPPL1, SHIP2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B
KEYWDS HELIX BUNDLE, SIGNALING PROTEIN, ACTIN-BINDING, ALTERNATIVE KEYWDS 2 SPLICING, CELL ADHESION, CYTOPLASM, CYTOSKELETON, DIABETES KEYWDS 3 MELLITUS, HYDROLASE, IMMUNE RESPONSE, MEMBRANE, KEYWDS 4 PHOSPHOPROTEIN, POLYMORPHISM, SH2 DOMAIN, SH3-BINDING
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.LEONE,M.PELLECCHIA
REVDAT 2 03-MAR-09 2K4P 1 JRNL VERSN REVDAT 1 25-NOV-08 2K4P 0
JRNL AUTH M.LEONE,J.CELLITTI,M.PELLECCHIA JRNL TITL NMR STUDIES OF A HETEROTYPIC SAM-SAM DOMAIN JRNL TITL 2 ASSOCIATION: THE INTERACTION BETWEEN THE LIPID JRNL TITL 3 PHOSPHATASE SHIP2 AND THE EPHA2 RECEPTOR. JRNL REF BIOCHEMISTRY V. 47 12721 2008 JRNL REFN ISSN 0006-2960 JRNL PMID 18991394 JRNL DOI 10.1021/BI801713F
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, P. ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THIS SET OF STRUCTURES WERE REMARK 3 GENERATED BY USING ONLY CYANA 2.1
REMARK 4 REMARK 4 2K4P COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUN-08. REMARK 100 THE RCSB ID CODE IS RCSB100672.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.7 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8 MM [U-100% 15N] SHIP2- REMARK 210 SAM, 11.9 MM PHOSPHATES, 137 REMARK 210 MM SODIUM CHLORIDE, 2.7 MM REMARK 210 POTASSIUM CHLORIDE, 0.3% MM REMARK 210 SODIUM AZIDE, 95% H2O/5% D2O; REMARK 210 0.8 MM [U-100% 13C; U-100% REMARK 210 15N] SHIP2-SAM, 11.9 MM REMARK 210 PHOSPHATES, 137 MM SODIUM REMARK 210 CHLORIDE, 2.7 MM POTASSIUM REMARK 210 CHLORIDE, 0.3% MM SODIUM REMARK 210 AZIDE, 95% H2O/5% D2O; 0.8 MM REMARK 210 SHIP2-SAM, 11.9 MM PHOSPHATES, REMARK 210 137 MM SODIUM CHLORIDE, 2.7 MM REMARK 210 POTASSIUM CHLORIDE, 0.3% MM REMARK 210 SODIUM AZIDE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY, 3D 1H-13C REMARK 210 NOESY, 2D 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 2, XEASY REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 465 MET A 21
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 24 76.04 -104.23 REMARK 500 1 ALA A 27 -67.80 -158.25 REMARK 500 1 SER A 30 -74.52 -60.28 REMARK 500 1 GLN A 70 32.57 -99.27 REMARK 500 2 LEU A 24 83.55 53.42 REMARK 500 2 ALA A 27 -71.09 -159.65 REMARK 500 2 SER A 30 -74.90 -60.44 REMARK 500 2 GLN A 70 30.35 -95.73 REMARK 500 2 LEU A 84 -74.44 -58.95 REMARK 500 3 SER A 30 -71.84 -67.34 REMARK 500 4 LEU A 24 122.42 -174.84 REMARK 500 4 GLU A 26 -74.51 -135.61 REMARK 500 4 ALA A 27 -75.86 -117.27 REMARK 500 4 SER A 30 -74.60 -63.24 REMARK 500 5 ALA A 27 78.10 -164.62 REMARK 500 5 SER A 30 -74.64 -88.76 REMARK 500 5 LEU A 38 35.17 -141.86 REMARK 500 6 LEU A 24 -54.01 -123.25 REMARK 500 6 ALA A 27 41.62 -161.43 REMARK 500 6 SER A 30 -74.89 -60.47 REMARK 500 7 MET A 29 -38.00 -177.94 REMARK 500 7 SER A 30 -73.35 -63.24 REMARK 500 8 SER A 30 -75.76 -77.81 REMARK 500 8 SER A 85 41.69 -103.24 REMARK 500 9 SER A 30 -72.32 -107.38 REMARK 500 9 LEU A 84 -72.37 -71.73 REMARK 500 10 LEU A 24 78.86 61.32 REMARK 500 10 SER A 30 -77.36 -75.79 REMARK 500 10 SER A 85 33.16 -97.18 REMARK 500 11 GLU A 26 31.62 -97.64 REMARK 500 11 ALA A 27 -167.43 -172.97 REMARK 500 11 MET A 29 -33.76 -179.36 REMARK 500 11 SER A 30 -75.00 -69.29 REMARK 500 11 GLN A 70 30.37 -95.73 REMARK 500 11 LEU A 84 -71.68 -68.88 REMARK 500 12 SER A 30 -77.25 -74.52 REMARK 500 12 LEU A 38 26.66 -140.01 REMARK 500 12 GLN A 70 30.22 -95.76 REMARK 500 12 SER A 85 56.96 -97.98 REMARK 500 13 ALA A 27 71.72 -157.98 REMARK 500 13 SER A 30 -74.80 -59.83 REMARK 500 14 GLU A 26 51.78 -143.54 REMARK 500 14 ALA A 27 -168.16 -172.85 REMARK 500 14 SER A 30 -72.38 -68.49 REMARK 500 14 SER A 85 46.69 -104.26 REMARK 500 15 ALA A 27 70.09 61.32 REMARK 500 15 SER A 30 -74.76 -64.61 REMARK 500 15 LEU A 53 172.38 -53.10 REMARK 500 16 LEU A 24 28.15 -149.83 REMARK 500 16 ALA A 27 35.31 -168.90 REMARK 500 16 SER A 30 -73.51 -63.92 REMARK 500 16 LEU A 38 23.15 -142.12 REMARK 500 16 HIS A 47 49.25 -93.04 REMARK 500 16 ASN A 48 -39.05 -161.21 REMARK 500 16 LEU A 53 -70.96 67.31 REMARK 500 17 LEU A 24 90.02 59.32 REMARK 500 17 SER A 30 -72.56 -67.85 REMARK 500 17 LEU A 38 21.52 -142.10 REMARK 500 17 GLN A 70 30.24 -95.94 REMARK 500 18 GLU A 26 76.81 57.05 REMARK 500 18 ALA A 27 -80.06 66.42 REMARK 500 18 SER A 30 -74.71 -64.09 REMARK 500 18 GLN A 70 30.11 -95.71 REMARK 500 18 SER A 85 30.55 -98.91 REMARK 500 19 SER A 30 -77.17 -51.97 REMARK 500 19 GLN A 70 30.33 -95.79 REMARK 500 20 LEU A 24 71.10 51.98 REMARK 500 20 ALA A 27 -79.97 66.57 REMARK 500 20 SER A 30 -73.32 -65.61 REMARK 500 20 LEU A 38 26.52 -140.67 REMARK 500 20 GLN A 70 31.52 -98.38 REMARK 500 REMARK 500 REMARK: NULL
DBREF 2K4P A 22 86 UNP O15357 SHIP2_HUMAN 1194 1258
SEQADV 2K4P MET A 1 UNP O15357 EXPRESSION TAG SEQADV 2K4P GLY A 2 UNP O15357 EXPRESSION TAG SEQADV 2K4P SER A 3 UNP O15357 EXPRESSION TAG SEQADV 2K4P SER A 4 UNP O15357 EXPRESSION TAG SEQADV 2K4P HIS A 5 UNP O15357 EXPRESSION TAG SEQADV 2K4P HIS A 6 UNP O15357 EXPRESSION TAG SEQADV 2K4P HIS A 7 UNP O15357 EXPRESSION TAG SEQADV 2K4P HIS A 8 UNP O15357 EXPRESSION TAG SEQADV 2K4P HIS A 9 UNP O15357 EXPRESSION TAG SEQADV 2K4P HIS A 10 UNP O15357 EXPRESSION TAG SEQADV 2K4P SER A 11 UNP O15357 EXPRESSION TAG SEQADV 2K4P SER A 12 UNP O15357 EXPRESSION TAG SEQADV 2K4P GLY A 13 UNP O15357 EXPRESSION TAG SEQADV 2K4P LEU A 14 UNP O15357 EXPRESSION TAG SEQADV 2K4P VAL A 15 UNP O15357 EXPRESSION TAG SEQADV 2K4P PRO A 16 UNP O15357 EXPRESSION TAG SEQADV 2K4P ARG A 17 UNP O15357 EXPRESSION TAG SEQADV 2K4P GLY A 18 UNP O15357 EXPRESSION TAG SEQADV 2K4P SER A 19 UNP O15357 EXPRESSION TAG SEQADV 2K4P HIS A 20 UNP O15357 EXPRESSION TAG SEQADV 2K4P MET A 21 UNP O15357 EXPRESSION TAG
SEQRES 1 A 86 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 86 LEU VAL PRO ARG GLY SER HIS MET SER GLY LEU GLY GLU SEQRES 3 A 86 ALA GLY MET SER ALA TRP LEU ARG ALA ILE GLY LEU GLU SEQRES 4 A 86 ARG TYR GLU GLU GLY LEU VAL HIS ASN GLY TRP ASP ASP SEQRES 5 A 86 LEU GLU PHE LEU SER ASP ILE THR GLU GLU ASP LEU GLU SEQRES 6 A 86 GLU ALA GLY VAL GLN ASP PRO ALA HIS LYS ARG LEU LEU SEQRES 7 A 86 LEU ASP THR LEU GLN LEU SER LYS
HELIX 1 1 MET A 29 ALA A 35 1 7 HELIX 2 2 LEU A 38 ARG A 40 5 3 HELIX 3 3 TYR A 41 HIS A 47 1 7 HELIX 4 4 ASP A 52 SER A 57 1 6 HELIX 5 5 THR A 60 ALA A 67 1 8 HELIX 6 6 ASP A 71 SER A 85 1 15
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000