10 20 30 40 50 60 70 80 2K4K - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RNA BINDING PROTEIN 13-JUN-08 2K4K
TITLE SOLUTION STRUCTURE OF GSP13 FROM BACILLUS SUBTILIS
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENERAL STRESS PROTEIN 13; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GSP13; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: YUGI, BSU31390; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET-21A
KEYWDS S1, CYTOPLASM, STRESS RESPONSE, RNA BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR W.YU,B.YU,J.HU,C.JIN,B.XIA
REVDAT 1 12-MAY-09 2K4K 0
JRNL AUTH W.YU,J.HU,B.YU,W.XIA,C.JIN,B.XIA JRNL TITL SOLUTION STRUCTURE OF GSP13 FROM BACILLUS SUBTILIS JRNL TITL 2 EXHIBITS AN S1 DOMAIN RELATED TO COLD SHOCK JRNL TITL 3 PROTEINS. JRNL REF J.BIOMOL.NMR V. 43 255 2009 JRNL REFN ISSN 0925-2738 JRNL PMID 19152054 JRNL DOI 10.1007/S10858-009-9298-Y
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2K4K COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUN-08. REMARK 100 THE RCSB ID CODE IS RCSB100667.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 0.07 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 GSP13, 20 MM POTASSIUM REMARK 210 PHOSPHATE, 20 MM SODIUM REMARK 210 CHLORIDE, 1 MM EDTA, 90% H2O/ REMARK 210 10% D2O; 1 MM [U-100% 15N] REMARK 210 GSP13, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO) REMARK 210 NH; 3D HNCO; 3D HNCACB; 3D REMARK 210 HBHA(CO)NH; 3D HCCH-TOCSY; 3D REMARK 210 HCCH-COSY; 3D 1H-13C NOESY; 2D REMARK 210 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, NMRVIEW, NMRDRAW REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 4 27.07 -150.75 REMARK 500 1 THR A 110 27.15 -141.91 REMARK 500 1 ASP A 113 -43.97 -140.52 REMARK 500 1 TRP A 118 176.15 64.10 REMARK 500 1 ILE A 119 -31.05 -146.30 REMARK 500 2 LYS A 4 17.08 53.47 REMARK 500 2 ALA A 96 31.49 -144.04 REMARK 500 2 GLN A 106 19.12 53.43 REMARK 500 2 PHE A 108 -47.30 -154.99 REMARK 500 2 LEU A 115 -40.72 -134.97 REMARK 500 2 GLU A 120 -160.48 -77.87 REMARK 500 2 ASP A 126 -45.12 -139.92 REMARK 500 3 GLU A 30 17.74 -144.36 REMARK 500 3 GLU A 101 30.38 -142.40 REMARK 500 3 LEU A 115 -9.69 -143.33 REMARK 500 3 ILE A 119 0.62 -67.97 REMARK 500 4 PRO A 83 21.65 -69.16 REMARK 500 4 LYS A 94 90.53 -69.92 REMARK 500 4 PHE A 108 -56.64 63.60 REMARK 500 4 ASP A 113 -15.21 58.63 REMARK 500 4 SER A 122 -178.06 65.49 REMARK 500 5 HIS A 42 41.67 -75.50 REMARK 500 5 ARG A 91 -29.43 -158.48 REMARK 500 5 GLN A 97 -131.06 -137.76 REMARK 500 5 SER A 103 20.01 -72.33 REMARK 500 5 GLU A 116 -32.79 -130.92 REMARK 500 5 TRP A 118 58.76 39.09 REMARK 500 5 ILE A 119 27.79 -74.94 REMARK 500 5 ASP A 126 34.07 -84.12 REMARK 500 6 SER A 88 -24.76 -142.32 REMARK 500 7 VAL A 45 69.86 -152.77 REMARK 500 7 LEU A 52 -169.62 54.64 REMARK 500 7 LYS A 85 74.21 -68.60 REMARK 500 7 SER A 99 29.28 -76.91 REMARK 500 7 SER A 103 32.69 -78.00 REMARK 500 8 ALA A 20 2.01 -64.95 REMARK 500 8 ASP A 28 21.03 -144.80 REMARK 500 8 GLU A 29 -11.48 62.62 REMARK 500 8 HIS A 42 37.18 -76.35 REMARK 500 8 VAL A 45 54.39 -152.52 REMARK 500 8 ALA A 96 40.83 -71.69 REMARK 500 8 VAL A 98 -162.76 -124.86 REMARK 500 8 THR A 110 -81.91 59.31 REMARK 500 8 SER A 122 -36.25 -140.47 REMARK 500 9 ASP A 66 57.75 -141.61 REMARK 500 9 SER A 88 8.33 -67.89 REMARK 500 9 VAL A 98 -19.48 -140.68 REMARK 500 9 GLU A 116 -36.50 -38.71 REMARK 500 9 GLU A 120 49.44 -140.38 REMARK 500 9 MET A 121 -139.58 50.22 REMARK 500 9 ASP A 126 -53.58 -146.85 REMARK 500 9 LEU A 127 -9.73 -140.59 REMARK 500 10 GLU A 30 20.32 -141.81 REMARK 500 10 SER A 88 7.49 -66.45 REMARK 500 10 GLN A 97 -26.97 60.28 REMARK 500 11 THR A 41 -161.18 -165.24 REMARK 500 11 PHE A 44 27.63 -77.50 REMARK 500 11 LYS A 94 -63.28 -145.66 REMARK 500 11 PHE A 108 49.75 -77.49 REMARK 500 11 ASN A 109 -39.43 -158.15 REMARK 500 11 GLU A 120 -46.54 -157.19 REMARK 500 12 ALA A 3 -149.66 -145.46 REMARK 500 12 HIS A 42 3.71 -61.05 REMARK 500 12 LYS A 46 -52.14 73.16 REMARK 500 12 PRO A 83 108.01 -48.06 REMARK 500 12 SER A 88 -38.92 -140.14 REMARK 500 12 ALA A 102 13.95 -142.16 REMARK 500 12 LYS A 112 -74.94 55.16 REMARK 500 13 ALA A 2 28.55 47.11 REMARK 500 13 ALA A 81 -158.03 51.16 REMARK 500 13 PRO A 93 30.95 -75.50 REMARK 500 13 LYS A 112 12.09 -140.59 REMARK 500 14 PHE A 44 42.28 -78.68 REMARK 500 14 THR A 79 -8.87 -147.10 REMARK 500 14 ALA A 82 60.16 39.77 REMARK 500 14 MET A 121 -4.71 -141.98 REMARK 500 14 LYS A 125 18.89 -143.37 REMARK 500 15 HIS A 42 39.53 -80.51 REMARK 500 15 ALA A 102 -154.13 -141.61 REMARK 500 15 GLU A 117 -41.45 -139.39 REMARK 500 15 MET A 121 -35.52 -148.11 REMARK 500 16 ALA A 82 59.04 36.96 REMARK 500 16 GLU A 87 -5.82 -150.27 REMARK 500 16 LEU A 115 -43.50 -146.51 REMARK 500 16 GLU A 117 30.53 -147.61 REMARK 500 16 ASP A 126 172.07 -56.91 REMARK 500 17 THR A 79 -26.03 -146.56 REMARK 500 17 GLN A 97 23.71 -77.53 REMARK 500 17 LEU A 127 66.93 -69.68 REMARK 500 18 PHE A 5 162.14 56.77 REMARK 500 18 ALA A 20 -5.82 -59.76 REMARK 500 18 HIS A 42 36.96 -78.07 REMARK 500 18 GLU A 100 -49.88 -142.08 REMARK 500 18 GLU A 101 -150.97 -136.97 REMARK 500 18 ALA A 102 36.19 -69.78 REMARK 500 18 GLU A 120 -34.36 69.41 REMARK 500 18 ASP A 126 49.98 -79.50 REMARK 500 19 LEU A 27 -46.99 -135.66 REMARK 500 19 PHE A 44 34.12 -75.42 REMARK 500 19 ALA A 81 -59.03 -135.75 REMARK 500 19 ALA A 102 41.83 -76.64 REMARK 500 19 ASN A 123 22.74 49.85 REMARK 500 19 ASP A 126 -87.64 21.08 REMARK 500 19 LEU A 127 50.04 -145.44 REMARK 500 20 ALA A 82 67.05 31.45 REMARK 500 20 LYS A 92 80.93 64.86 REMARK 500 20 LYS A 94 4.20 58.62 REMARK 500 20 ALA A 95 41.88 -150.39 REMARK 500 REMARK 500 REMARK: NULL
DBREF 2K4K A 1 130 UNP P80870 GS13_BACSU 1 130
SEQRES 1 A 130 MET ALA ALA LYS PHE GLU VAL GLY SER VAL TYR THR GLY SEQRES 2 A 130 LYS VAL THR GLY LEU GLN ALA TYR GLY ALA PHE VAL ALA SEQRES 3 A 130 LEU ASP GLU GLU THR GLN GLY LEU VAL HIS ILE SER GLU SEQRES 4 A 130 VAL THR HIS GLY PHE VAL LYS ASP ILE ASN GLU HIS LEU SEQRES 5 A 130 SER VAL GLY ASP GLU VAL GLN VAL LYS VAL LEU ALA VAL SEQRES 6 A 130 ASP GLU GLU LYS GLY LYS ILE SER LEU SER ILE ARG ALA SEQRES 7 A 130 THR GLN ALA ALA PRO GLU LYS LYS GLU SER LYS PRO ARG SEQRES 8 A 130 LYS PRO LYS ALA ALA GLN VAL SER GLU GLU ALA SER THR SEQRES 9 A 130 PRO GLN GLY PHE ASN THR LEU LYS ASP LYS LEU GLU GLU SEQRES 10 A 130 TRP ILE GLU MET SER ASN ARG LYS ASP LEU ILE LYS LYS
HELIX 1 1 SER A 38 VAL A 40 5 3 HELIX 2 2 ASP A 47 HIS A 51 5 5 HELIX 3 3 ILE A 76 ALA A 82 1 7 HELIX 4 4 LYS A 125 LYS A 129 5 5
SHEET 1 A 6 VAL A 10 GLN A 19 0 SHEET 2 A 6 GLY A 22 ASP A 28 -1 O ALA A 26 N LYS A 14 SHEET 3 A 6 THR A 31 HIS A 36 -1 O GLY A 33 N VAL A 25 SHEET 4 A 6 LYS A 71 SER A 75 1 O ILE A 72 N LEU A 34 SHEET 5 A 6 GLU A 57 ASP A 66 -1 N LEU A 63 O SER A 73 SHEET 6 A 6 VAL A 10 GLN A 19 -1 N TYR A 11 O VAL A 60
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000