10 20 30 40 50 60 70 80 2K45 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PROTEIN TRANSPORT 28-MAY-08 2K45
TITLE C2A DOMAIN OF SYNAPTOTOTAGMIN I SOLUTION STRUCTURE IN THE TITLE 2 FGF-1-C2A BINARY COMPLEX: KEY COMPONENT IN THE FIBROBLAST TITLE 3 GROWTHFACTOR NON-CLASSICAL PATHWAY
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SYNAPTOTAGMIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 141-268; COMPND 5 SYNONYM: SYNAPTOTAGMIN I, SYTI, P65, C2A; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SYT1, SVP65, SYT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX
KEYWDS BETA BARREL, CALCIUM, CELL JUNCTION, CYTOPLASMIC VESICLE, KEYWDS 2 GLYCOPROTEIN, LIPOPROTEIN, MEMBRANE, METAL-BINDING, KEYWDS 3 PALMITATE, PHOSPHOPROTEIN, SYNAPSE, TRANSMEMBRANE, PROTEIN KEYWDS 4 TRANSPORT
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR S.K.MOHAN,C.YU
REVDAT 1 02-JUN-09 2K45 0
JRNL AUTH K.M.SEPURU,C.YU JRNL TITL FGF-1-C2A BINARY COMPLEX STRUCTURE: KEY COMPONENT JRNL TITL 2 IN THE ACIDIC FIBROBLAST GROWTH FACTOR RELEASE JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.2 REMARK 3 AUTHORS : LINGE, O'DONOGHUE, NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2K45 COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUN-08. REMARK 100 THE RCSB ID CODE IS RCSB100652.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 50MM (NH4)2SO4 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0MM [U-100% 13C; U-100% REMARK 210 15N] C2A, 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 2D 1H REMARK 210 -15N HSQC; 2D 1H-13C HSQC; 3D REMARK 210 CBCA(CO)NH; 3D HNCA; 3D HN(CO) REMARK 210 CA; 3D HBHA(CO)NH; 3D HNCO; 3D REMARK 210 1H-15N TOCSY; 3D HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AV600; AV800 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA 1.2, SPARKY REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : 20 STRUCTURES FOR LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 2 TYR A 8 CE1 TYR A 8 CZ 0.085 REMARK 500 2 TYR A 8 CZ TYR A 8 CE2 -0.082 REMARK 500 4 PHE A 73 CE1 PHE A 73 CZ 0.123 REMARK 500 6 TYR A 8 CE1 TYR A 8 CZ 0.127 REMARK 500 6 TYR A 8 CZ TYR A 8 CE2 -0.143 REMARK 500 6 TYR A 41 CE1 TYR A 41 CZ 0.125 REMARK 500 6 TYR A 41 CZ TYR A 41 CE2 -0.106 REMARK 500 7 TYR A 8 CE1 TYR A 8 CZ -0.090 REMARK 500 7 TYR A 8 CZ TYR A 8 CE2 0.085 REMARK 500 9 TYR A 41 CE1 TYR A 41 CZ -0.101 REMARK 500 9 TYR A 41 CZ TYR A 41 CE2 0.099 REMARK 500 10 TYR A 8 CE1 TYR A 8 CZ 0.081 REMARK 500 10 TYR A 41 CE1 TYR A 41 CZ 0.100 REMARK 500 10 TYR A 41 CZ TYR A 41 CE2 -0.106 REMARK 500 11 PHE A 73 CE1 PHE A 73 CZ 0.141 REMARK 500 11 PHE A 73 CZ PHE A 73 CE2 -0.124 REMARK 500 11 TYR A 77 CE1 TYR A 77 CZ 0.134 REMARK 500 11 TYR A 77 CZ TYR A 77 CE2 -0.138 REMARK 500 13 TYR A 8 CE1 TYR A 8 CZ -0.120 REMARK 500 13 TYR A 8 CZ TYR A 8 CE2 0.115 REMARK 500 16 TYR A 8 CE1 TYR A 8 CZ -0.119 REMARK 500 16 TYR A 8 CZ TYR A 8 CE2 0.112 REMARK 500 16 TYR A 41 CE1 TYR A 41 CZ 0.082 REMARK 500 17 TYR A 8 CE1 TYR A 8 CZ -0.086 REMARK 500 17 TYR A 8 CZ TYR A 8 CE2 0.079 REMARK 500 18 TYR A 8 CE1 TYR A 8 CZ -0.092 REMARK 500 18 TYR A 8 CZ TYR A 8 CE2 0.088 REMARK 500 19 TYR A 41 CE1 TYR A 41 CZ -0.107 REMARK 500 19 TYR A 41 CZ TYR A 41 CE2 0.104 REMARK 500 20 TYR A 8 CE1 TYR A 8 CZ -0.101 REMARK 500 20 TYR A 8 CZ TYR A 8 CE2 0.098 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 14 PHE A 73 N - CA - CB ANGL. DEV. = -12.0 DEGREES REMARK 500 20 ARG A 121 N - CA - CB ANGL. DEV. = -15.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 2 81.61 60.57 REMARK 500 1 ILE A 23 -155.69 -73.71 REMARK 500 1 ILE A 24 -74.01 -122.93 REMARK 500 1 ASP A 39 75.04 -116.02 REMARK 500 1 LEU A 47 -168.17 -71.73 REMARK 500 1 PRO A 48 -3.82 -33.04 REMARK 500 1 LYS A 50 82.13 114.34 REMARK 500 1 ASN A 64 74.05 -118.11 REMARK 500 1 ASN A 68 79.38 61.18 REMARK 500 1 ARG A 94 0.19 59.94 REMARK 500 1 PHE A 95 -60.92 -149.57 REMARK 500 1 PHE A 113 58.60 -102.70 REMARK 500 1 HIS A 115 -105.39 -122.70 REMARK 500 2 LYS A 2 82.51 -174.85 REMARK 500 2 ILE A 23 -148.39 -79.08 REMARK 500 2 ILE A 24 -69.31 -121.28 REMARK 500 2 ASP A 39 71.30 -109.79 REMARK 500 2 PRO A 48 14.08 1.61 REMARK 500 2 ASN A 68 77.04 56.52 REMARK 500 2 ARG A 94 -1.22 61.78 REMARK 500 2 PHE A 95 -67.37 -144.08 REMARK 500 2 PHE A 113 58.07 -93.18 REMARK 500 2 HIS A 115 -108.31 -124.53 REMARK 500 2 GLU A 127 78.83 -100.59 REMARK 500 3 LYS A 2 91.06 -171.76 REMARK 500 3 ILE A 23 -119.32 -107.38 REMARK 500 3 ILE A 24 -76.05 -109.17 REMARK 500 3 ASP A 39 71.60 -115.46 REMARK 500 3 PRO A 48 -16.21 5.49 REMARK 500 3 ASN A 68 73.10 62.75 REMARK 500 3 ARG A 94 -0.28 62.41 REMARK 500 3 PHE A 95 -63.80 -152.63 REMARK 500 3 PHE A 113 46.08 -97.28 REMARK 500 3 HIS A 115 -93.54 -99.02 REMARK 500 4 TYR A 8 -153.22 -163.75 REMARK 500 4 ILE A 23 -155.21 -91.27 REMARK 500 4 ILE A 24 -74.75 -115.46 REMARK 500 4 ASP A 39 70.81 -112.75 REMARK 500 4 PRO A 48 -31.96 -22.32 REMARK 500 4 ASN A 68 75.66 55.74 REMARK 500 4 ARG A 94 -23.68 61.51 REMARK 500 4 PHE A 95 -51.24 -157.08 REMARK 500 4 HIS A 115 -134.69 -112.81 REMARK 500 5 LYS A 2 92.15 177.84 REMARK 500 5 ILE A 23 -153.58 -86.09 REMARK 500 5 ASP A 39 73.42 -106.49 REMARK 500 5 PRO A 48 17.34 4.25 REMARK 500 5 LYS A 51 34.69 -94.13 REMARK 500 5 ASN A 68 74.29 57.09 REMARK 500 5 PRO A 76 167.07 -23.74 REMARK 500 5 ARG A 94 0.16 54.77 REMARK 500 5 PHE A 95 -66.64 -145.67 REMARK 500 5 GLU A 103 146.79 -171.59 REMARK 500 5 HIS A 115 -106.00 -122.59 REMARK 500 6 LYS A 2 80.24 -177.20 REMARK 500 6 ILE A 23 -120.81 -103.46 REMARK 500 6 ILE A 24 -77.05 -101.64 REMARK 500 6 ASP A 39 73.39 -114.30 REMARK 500 6 PRO A 48 14.61 1.34 REMARK 500 6 LYS A 51 40.47 -90.42 REMARK 500 6 GLU A 55 109.82 -160.95 REMARK 500 6 ASN A 68 73.20 61.18 REMARK 500 6 ARG A 94 -4.42 62.18 REMARK 500 6 PHE A 95 -56.02 -157.27 REMARK 500 6 HIS A 115 -121.69 -119.70 REMARK 500 6 GLU A 127 78.34 -108.76 REMARK 500 7 LYS A 2 83.33 68.94 REMARK 500 7 TYR A 8 -154.09 -161.16 REMARK 500 7 ILE A 24 -71.18 -120.17 REMARK 500 7 ASP A 39 72.11 -115.09 REMARK 500 7 PRO A 48 -1.50 10.78 REMARK 500 7 ASP A 49 -73.54 -88.96 REMARK 500 7 ASN A 68 73.98 54.40 REMARK 500 7 PHE A 95 -66.45 -141.96 REMARK 500 7 PHE A 113 64.28 -113.05 REMARK 500 7 HIS A 115 -134.66 -109.68 REMARK 500 7 GLU A 127 78.67 -104.10 REMARK 500 8 ILE A 24 -71.55 -117.13 REMARK 500 8 ASP A 39 71.48 -111.37 REMARK 500 8 PRO A 48 -6.72 7.75 REMARK 500 8 ASP A 49 -71.10 -86.29 REMARK 500 8 LYS A 51 32.22 -90.21 REMARK 500 8 ASN A 68 71.60 61.20 REMARK 500 8 THR A 72 111.56 121.34 REMARK 500 8 ARG A 94 -29.12 63.30 REMARK 500 8 PHE A 95 -66.91 -152.13 REMARK 500 8 HIS A 115 -116.57 -118.28 REMARK 500 8 SER A 125 107.82 -51.95 REMARK 500 9 LYS A 2 85.14 178.97 REMARK 500 9 ILE A 23 -147.15 -69.20 REMARK 500 9 ILE A 24 -75.80 -111.71 REMARK 500 9 ASP A 39 72.51 -108.85 REMARK 500 9 PRO A 48 10.15 1.81 REMARK 500 9 ASN A 68 78.48 61.74 REMARK 500 9 PHE A 95 -74.64 -138.26 REMARK 500 9 ILE A 101 -69.05 -101.00 REMARK 500 9 PHE A 113 59.99 -104.58 REMARK 500 9 HIS A 115 -108.26 -114.38 REMARK 500 10 LYS A 2 93.00 178.04 REMARK 500 10 ILE A 23 -155.59 -74.13 REMARK 500 10 ILE A 24 -72.96 -122.96 REMARK 500 10 ASP A 39 74.09 -115.11 REMARK 500 10 PRO A 48 12.86 -2.91 REMARK 500 10 GLU A 69 99.88 -161.56 REMARK 500 10 THR A 72 139.18 78.17 REMARK 500 10 ARG A 94 -19.84 57.10 REMARK 500 10 PHE A 95 -67.27 -143.61 REMARK 500 10 HIS A 115 -108.31 -125.51 REMARK 500 11 ILE A 23 -122.77 -109.46 REMARK 500 11 ILE A 24 -80.13 -107.11 REMARK 500 11 ASP A 39 69.35 -110.73 REMARK 500 11 PRO A 48 1.30 6.29 REMARK 500 11 LYS A 51 31.90 -90.12 REMARK 500 11 GLU A 55 105.71 -160.74 REMARK 500 11 ASN A 68 75.49 71.40 REMARK 500 11 ARG A 94 -38.66 56.47 REMARK 500 11 PHE A 95 -37.58 -163.34 REMARK 500 11 SER A 96 -143.61 -69.40 REMARK 500 11 ILE A 100 152.96 -47.82 REMARK 500 11 HIS A 115 -109.84 -116.32 REMARK 500 12 TYR A 8 -166.61 -161.14 REMARK 500 12 VAL A 21 96.89 -164.87 REMARK 500 12 ILE A 23 -121.25 -100.63 REMARK 500 12 ILE A 24 -75.94 -91.68 REMARK 500 12 ASP A 39 72.93 -119.58 REMARK 500 12 PRO A 40 147.42 -32.87 REMARK 500 12 PRO A 48 -30.15 -26.14 REMARK 500 12 LYS A 51 47.54 -85.48 REMARK 500 12 PHE A 95 -74.81 -141.11 REMARK 500 12 HIS A 115 -108.61 -118.66 REMARK 500 13 LYS A 2 87.58 -175.16 REMARK 500 13 VAL A 21 112.33 -160.85 REMARK 500 13 ILE A 23 -151.18 -68.85 REMARK 500 13 ILE A 24 -72.68 -113.65 REMARK 500 13 ASP A 39 71.94 -117.70 REMARK 500 13 PRO A 48 11.92 -3.03 REMARK 500 13 LYS A 51 32.99 -87.67 REMARK 500 13 ASN A 68 56.33 39.35 REMARK 500 13 ARG A 94 -33.34 60.23 REMARK 500 13 PHE A 95 -54.83 -144.15 REMARK 500 13 ILE A 101 -75.17 -83.36 REMARK 500 13 PHE A 104 123.35 -172.15 REMARK 500 13 VAL A 106 94.34 -170.40 REMARK 500 13 HIS A 115 -109.91 -120.08 REMARK 500 14 LYS A 2 87.17 -168.29 REMARK 500 14 TYR A 8 -152.50 -163.02 REMARK 500 14 ILE A 23 -157.91 -86.65 REMARK 500 14 ILE A 24 -72.40 -113.86 REMARK 500 14 ASP A 39 70.56 -115.03 REMARK 500 14 PRO A 48 -2.24 6.19 REMARK 500 14 LYS A 50 75.39 75.71 REMARK 500 14 LYS A 51 87.91 -61.51 REMARK 500 14 ASN A 68 71.68 51.67 REMARK 500 14 THR A 72 134.67 20.83 REMARK 500 14 LYS A 74 58.14 -99.81 REMARK 500 14 ARG A 94 -33.93 61.19 REMARK 500 14 PHE A 95 -55.10 -145.84 REMARK 500 14 HIS A 115 -98.24 -88.65 REMARK 500 15 LYS A 2 89.94 176.81 REMARK 500 15 TYR A 8 -157.99 -160.65 REMARK 500 15 ILE A 23 -159.60 -90.04 REMARK 500 15 ILE A 24 -72.56 -116.27 REMARK 500 15 PRO A 30 143.55 -39.66 REMARK 500 15 ASP A 39 70.35 -111.40 REMARK 500 15 LEU A 47 -169.67 -70.86 REMARK 500 15 PRO A 48 -8.55 -36.06 REMARK 500 15 LYS A 50 71.16 118.71 REMARK 500 15 LYS A 51 32.03 -83.00 REMARK 500 15 ASN A 68 55.39 39.23 REMARK 500 15 ARG A 94 -0.81 61.51 REMARK 500 15 PHE A 95 -79.57 -141.76 REMARK 500 15 PHE A 113 58.02 -96.30 REMARK 500 15 HIS A 115 -105.23 -124.64 REMARK 500 16 LYS A 2 82.65 -179.29 REMARK 500 16 TYR A 8 -159.82 -159.79 REMARK 500 16 ILE A 23 -156.48 -87.28 REMARK 500 16 ILE A 24 -70.28 -117.90 REMARK 500 16 MET A 34 57.51 -91.15 REMARK 500 16 ASP A 39 75.03 -107.39 REMARK 500 16 PRO A 40 142.76 -36.22 REMARK 500 16 PRO A 48 14.57 -1.18 REMARK 500 16 GLU A 55 109.18 -165.13 REMARK 500 16 ARG A 94 -34.32 61.72 REMARK 500 16 PHE A 95 -54.68 -143.85 REMARK 500 16 HIS A 115 -109.89 -119.32 REMARK 500 16 GLU A 127 78.70 -104.54 REMARK 500 17 LYS A 2 90.84 63.42 REMARK 500 17 VAL A 21 109.10 -160.95 REMARK 500 17 ILE A 23 -150.37 -70.61 REMARK 500 17 ILE A 24 -78.78 -115.47 REMARK 500 17 ASP A 39 71.37 -114.40 REMARK 500 17 PRO A 48 -36.62 -23.96 REMARK 500 17 LYS A 50 74.51 71.98 REMARK 500 17 LYS A 52 74.11 -104.38 REMARK 500 17 GLU A 55 101.22 -162.54 REMARK 500 17 ASN A 68 72.80 57.23 REMARK 500 17 PRO A 76 150.67 -46.83 REMARK 500 17 PHE A 95 -77.14 -137.76 REMARK 500 17 HIS A 115 -107.49 -122.13 REMARK 500 17 GLU A 127 78.71 -100.51 REMARK 500 18 LYS A 2 88.23 177.39 REMARK 500 18 TYR A 8 -158.14 -160.11 REMARK 500 18 ILE A 23 -159.02 -89.68 REMARK 500 18 ILE A 24 -75.49 -115.99 REMARK 500 18 ASP A 39 71.23 -109.06 REMARK 500 18 PRO A 48 15.68 -1.32 REMARK 500 18 LYS A 51 54.51 -90.81 REMARK 500 18 ASN A 68 72.67 55.40 REMARK 500 18 GLU A 69 94.89 -161.92 REMARK 500 18 THR A 72 110.55 166.53 REMARK 500 18 ARG A 94 -29.10 60.01 REMARK 500 18 PHE A 95 -61.45 -143.64 REMARK 500 18 LYS A 105 -167.09 -102.58 REMARK 500 18 PRO A 107 136.24 -15.85 REMARK 500 18 PHE A 113 63.45 -105.08 REMARK 500 18 HIS A 115 -134.28 -110.80 REMARK 500 19 LYS A 2 82.72 -172.38 REMARK 500 19 ILE A 23 -158.65 -86.78 REMARK 500 19 ILE A 24 -77.02 -125.93 REMARK 500 19 GLN A 25 134.16 -171.43 REMARK 500 19 ALA A 26 140.05 -175.72 REMARK 500 19 ALA A 27 111.86 170.46 REMARK 500 19 GLU A 28 38.97 21.16 REMARK 500 19 ASP A 39 73.02 -115.52 REMARK 500 19 PRO A 48 -29.76 -2.73 REMARK 500 19 LYS A 61 56.32 70.03 REMARK 500 19 ASN A 68 71.32 52.65 REMARK 500 19 PRO A 76 152.79 -28.31 REMARK 500 19 ARG A 94 -0.11 62.18 REMARK 500 19 PHE A 95 -63.05 -150.21 REMARK 500 19 PHE A 113 70.59 -100.40 REMARK 500 19 HIS A 115 -106.69 -123.80 REMARK 500 19 GLU A 127 79.40 -100.24 REMARK 500 20 TYR A 8 -147.32 -158.03 REMARK 500 20 ILE A 23 -155.30 -86.53 REMARK 500 20 ASP A 39 72.32 -112.81 REMARK 500 20 PRO A 48 3.48 -1.47 REMARK 500 20 ASN A 68 60.96 60.49 REMARK 500 20 THR A 72 135.27 60.47 REMARK 500 20 ARG A 94 -64.92 17.36 REMARK 500 20 PHE A 95 -41.79 -169.15 REMARK 500 20 SER A 96 -153.17 -96.40 REMARK 500 20 PHE A 113 68.15 -107.18 REMARK 500 20 HIS A 115 -105.75 -121.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN A 15 ASN A 16 1 146.49 REMARK 500 GLN A 15 ASN A 16 3 145.79 REMARK 500 VAL A 116 THR A 117 3 149.02 REMARK 500 THR A 117 GLU A 118 3 -122.66 REMARK 500 GLN A 15 ASN A 16 5 149.40 REMARK 500 ILE A 23 ILE A 24 6 -148.85 REMARK 500 LEU A 47 PRO A 48 7 -145.07 REMARK 500 LEU A 47 PRO A 48 8 -147.57 REMARK 500 THR A 72 PHE A 73 8 148.51 REMARK 500 GLN A 15 ASN A 16 9 147.76 REMARK 500 SER A 96 LYS A 97 9 149.96 REMARK 500 LYS A 97 HIS A 98 9 135.83 REMARK 500 ILE A 100 ILE A 101 9 149.34 REMARK 500 PHE A 104 LYS A 105 9 141.83 REMARK 500 GLN A 15 ASN A 16 10 149.95 REMARK 500 LYS A 57 VAL A 58 10 130.02 REMARK 500 ARG A 60 LYS A 61 10 146.63 REMARK 500 PHE A 67 ASN A 68 10 -149.18 REMARK 500 GLU A 69 GLN A 70 10 143.92 REMARK 500 LEU A 47 PRO A 48 11 -147.05 REMARK 500 PRO A 65 VAL A 66 11 145.16 REMARK 500 PHE A 67 ASN A 68 11 -148.57 REMARK 500 LYS A 97 HIS A 98 11 -146.23 REMARK 500 ASP A 99 ILE A 100 11 -123.27 REMARK 500 GLN A 15 ASN A 16 12 148.68 REMARK 500 LEU A 20 VAL A 21 12 148.64 REMARK 500 ILE A 23 ILE A 24 12 -138.28 REMARK 500 GLN A 15 ASN A 16 13 148.42 REMARK 500 LYS A 105 VAL A 106 13 122.65 REMARK 500 LEU A 47 PRO A 48 14 -147.61 REMARK 500 PHE A 54 GLU A 55 14 -122.29 REMARK 500 PHE A 71 THR A 72 14 149.25 REMARK 500 THR A 110 VAL A 111 14 -146.93 REMARK 500 GLN A 15 ASN A 16 15 147.34 REMARK 500 PHE A 54 GLU A 55 15 -149.25 REMARK 500 THR A 56 LYS A 57 15 112.33 REMARK 500 LYS A 57 VAL A 58 15 134.21 REMARK 500 LEU A 32 ASP A 33 16 136.18 REMARK 500 GLY A 35 GLY A 36 16 -130.91 REMARK 500 THR A 37 SER A 38 16 -129.15 REMARK 500 THR A 56 LYS A 57 16 127.48 REMARK 500 LYS A 57 VAL A 58 16 130.83 REMARK 500 GLN A 15 ASN A 16 17 145.35 REMARK 500 GLY A 22 ILE A 23 17 -147.57 REMARK 500 LYS A 53 PHE A 54 17 132.65 REMARK 500 LYS A 97 HIS A 98 17 139.60 REMARK 500 ILE A 100 ILE A 101 17 146.65 REMARK 500 GLN A 15 ASN A 16 18 149.41 REMARK 500 PHE A 54 GLU A 55 18 -149.54 REMARK 500 GLU A 55 THR A 56 18 -132.38 REMARK 500 GLU A 69 GLN A 70 18 136.08 REMARK 500 LYS A 105 VAL A 106 18 -102.14 REMARK 500 GLN A 25 ALA A 26 19 136.24 REMARK 500 ALA A 26 ALA A 27 19 118.78 REMARK 500 ALA A 27 GLU A 28 19 114.43 REMARK 500 GLN A 15 ASN A 16 20 149.74 REMARK 500 GLU A 69 GLN A 70 20 143.67 REMARK 500 GLU A 118 GLU A 119 20 -137.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 2 TYR A 90 0.06 SIDE_CHAIN REMARK 500 4 PHE A 73 0.07 SIDE_CHAIN REMARK 500 6 TYR A 41 0.07 SIDE_CHAIN REMARK 500 7 TYR A 90 0.07 SIDE_CHAIN REMARK 500 10 TYR A 8 0.06 SIDE_CHAIN REMARK 500 10 TYR A 90 0.07 SIDE_CHAIN REMARK 500 12 TYR A 41 0.05 SIDE_CHAIN REMARK 500 14 TYR A 41 0.07 SIDE_CHAIN REMARK 500 16 TYR A 41 0.07 SIDE_CHAIN REMARK 500 17 TYR A 90 0.06 SIDE_CHAIN REMARK 500 18 TYR A 90 0.05 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (11X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 3 ILE A 23 23.5 L L OUTSIDE RANGE REMARK 500 4 TYR A 8 23.7 L L OUTSIDE RANGE REMARK 500 5 TYR A 8 24.7 L L OUTSIDE RANGE REMARK 500 5 TYR A 12 24.9 L L OUTSIDE RANGE REMARK 500 6 ILE A 23 24.0 L L OUTSIDE RANGE REMARK 500 7 TYR A 8 22.9 L L OUTSIDE RANGE REMARK 500 8 TYR A 8 23.5 L L OUTSIDE RANGE REMARK 500 9 VAL A 21 23.0 L L OUTSIDE RANGE REMARK 500 10 VAL A 66 24.1 L L OUTSIDE RANGE REMARK 500 11 ILE A 23 24.4 L L OUTSIDE RANGE REMARK 500 12 TYR A 8 20.1 L L OUTSIDE RANGE REMARK 500 13 VAL A 21 23.1 L L OUTSIDE RANGE REMARK 500 14 TYR A 8 21.4 L L OUTSIDE RANGE REMARK 500 15 TYR A 8 23.7 L L OUTSIDE RANGE REMARK 500 16 TYR A 8 23.4 L L OUTSIDE RANGE REMARK 500 17 TYR A 8 24.1 L L OUTSIDE RANGE REMARK 500 18 TYR A 8 24.1 L L OUTSIDE RANGE REMARK 500 20 TYR A 8 19.7 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
DBREF 2K45 A 1 128 UNP P21579 SYT1_HUMAN 141 268
SEQRES 1 A 128 GLU LYS LEU GLY LYS LEU GLN TYR SER LEU ASP TYR ASP SEQRES 2 A 128 PHE GLN ASN ASN GLN LEU LEU VAL GLY ILE ILE GLN ALA SEQRES 3 A 128 ALA GLU LEU PRO ALA LEU ASP MET GLY GLY THR SER ASP SEQRES 4 A 128 PRO TYR VAL LYS VAL PHE LEU LEU PRO ASP LYS LYS LYS SEQRES 5 A 128 LYS PHE GLU THR LYS VAL HIS ARG LYS THR LEU ASN PRO SEQRES 6 A 128 VAL PHE ASN GLU GLN PHE THR PHE LYS VAL PRO TYR SER SEQRES 7 A 128 GLU LEU GLY GLY LYS THR LEU VAL MET ALA VAL TYR ASP SEQRES 8 A 128 PHE ASP ARG PHE SER LYS HIS ASP ILE ILE GLY GLU PHE SEQRES 9 A 128 LYS VAL PRO MET ASN THR VAL ASP PHE GLY HIS VAL THR SEQRES 10 A 128 GLU GLU TRP ARG ASP LEU GLN SER ALA GLU LYS
HELIX 1 1 PRO A 76 GLY A 81 1 6 HELIX 2 2 ASN A 109 VAL A 111 5 3
SHEET 1 A 8 PHE A 54 GLU A 55 0 SHEET 2 A 8 PRO A 40 PHE A 45 -1 N VAL A 44 O PHE A 54 SHEET 3 A 8 THR A 84 ASP A 91 -1 O ALA A 88 N LYS A 43 SHEET 4 A 8 ILE A 100 PRO A 107 -1 O VAL A 106 N LEU A 85 SHEET 5 A 8 THR A 117 SER A 125 -1 O GLN A 124 N GLU A 103 SHEET 6 A 8 GLY A 4 ASP A 13 -1 N LEU A 10 O THR A 117 SHEET 7 A 8 GLN A 18 ALA A 26 -1 O LEU A 20 N ASP A 11 SHEET 8 A 8 GLN A 70 PHE A 73 -1 O PHE A 73 N LEU A 19
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000