10 20 30 40 50 60 70 80 2K42 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SIGNALING PROTEIN 27-MAY-08 2K42
TITLE SOLUTION STRUCTURE OF THE GTPASE BINDING DOMAIN OF WASP IN TITLE 2 COMPLEX WITH ESPFU, AN EHEC EFFECTOR
COMPND MOL_ID: 1; COMPND 2 MOLECULE: WISKOTT-ALDRICH SYNDROME PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CRIB DOMAIN, UNP RESIDUES 242-310; COMPND 5 SYNONYM: WASP; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ESPFU; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: UNP RESIDUES 268-300; COMPND 11 SYNONYM: TIR-CYTOSKELETON COUPLING PROTEIN; COMPND 12 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: WAS, IMD2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PGEX; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O157:H7; SOURCE 11 ORGANISM_TAXID: 83334; SOURCE 12 GENE: TCCP, ECS2715; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 15 EXPRESSION_SYSTEM_VECTOR: PGEX
KEYWDS WASP, ESPFU, GBD, AUTOINHIBITION, CYTOPLASM, CYTOSKELETON, KEYWDS 2 DISEASE MUTATION, PHOSPHOPROTEIN, SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR H.-C.CHENG,B.M.SKEHAN,K.G.CAMPELLONE,J.M.LEONG,M.K.ROSEN
REVDAT 3 24-FEB-09 2K42 1 VERSN REVDAT 2 09-SEP-08 2K42 1 JRNL REVDAT 1 22-JUL-08 2K42 0
JRNL AUTH H.C.CHENG,B.M.SKEHAN,K.G.CAMPELLONE,J.M.LEONG, JRNL AUTH 2 M.K.ROSEN JRNL TITL STRUCTURAL MECHANISM OF WASP ACTIVATION BY THE JRNL TITL 2 ENTEROHAEMORRHAGIC E. COLI EFFECTOR ESPF(U). JRNL REF NATURE V. 454 1009 2008 JRNL REFN ISSN 0028-0836 JRNL PMID 18650809 JRNL DOI 10.1038/NATURE07160
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 2.1, CNS REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES (ARIA), BRUNGER, REMARK 3 ADAMS, CLORE, GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2K42 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUN-08. REMARK 100 THE RCSB ID CODE IS RCSB100649.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.15 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1~1.5 MM [U-100% 13C; U-100% REMARK 210 15N] GBD/R33 COMPLEX, 90% H2O/ REMARK 210 10% D2O; 1~1.5 MM [U-100% 13C; REMARK 210 U-100% 15N] GBD/R33 COMPLEX, REMARK 210 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCACB, 3D CBCA(CO)NH, 3D REMARK 210 HCCH-TOCSY, 2D 1H-15N HSQC, 3D REMARK 210 1H-15N NOESY, 3D HNCO, 4D 13C- REMARK 210 13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA 2.1, NMRVIEW, NMRPIPE REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 5 PHE A 33 CE1 PHE A 33 CZ 0.120 REMARK 500 11 TYR A 53 CE1 TYR A 53 CZ 0.080 REMARK 500 11 TYR A 53 CZ TYR A 53 CE2 -0.080 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 2 39.76 -147.60 REMARK 500 1 HIS A 8 96.84 -178.62 REMARK 500 1 VAL A 12 36.81 35.75 REMARK 500 1 ARG A 71 -63.03 -140.86 REMARK 500 1 HIS B 90 -64.19 -122.21 REMARK 500 1 ARG B 96 -79.75 -156.81 REMARK 500 1 ASN B 97 -171.68 -174.01 REMARK 500 2 SER A 4 -32.77 -149.01 REMARK 500 2 HIS A 8 71.58 45.52 REMARK 500 2 VAL A 12 -35.52 72.27 REMARK 500 2 ARG A 71 -58.72 -120.65 REMARK 500 2 ASP B 78 -166.92 -102.68 REMARK 500 2 HIS B 90 -73.48 -117.13 REMARK 500 2 ASN B 97 45.46 -77.42 REMARK 500 2 MET B 98 -46.47 -150.96 REMARK 500 2 ALA B 99 55.65 -95.85 REMARK 500 3 SER A 10 -42.03 64.81 REMARK 500 3 ASN A 24 42.09 -102.65 REMARK 500 3 ARG A 71 -104.74 -104.78 REMARK 500 3 MET B 75 72.40 -155.98 REMARK 500 3 PRO B 77 32.21 -94.46 REMARK 500 3 ASP B 78 -166.85 -164.31 REMARK 500 3 PRO B 94 172.26 -57.95 REMARK 500 3 ALA B 95 28.65 -69.72 REMARK 500 3 GLU B 100 -130.38 -173.37 REMARK 500 3 HIS B 101 144.51 73.87 REMARK 500 3 ASN B 107 54.92 -115.33 REMARK 500 4 PHE A 6 69.32 -106.89 REMARK 500 4 VAL A 9 18.97 -164.28 REMARK 500 4 SER A 10 21.68 -77.16 REMARK 500 4 HIS A 11 13.94 58.37 REMARK 500 4 VAL A 12 25.10 43.88 REMARK 500 4 MET B 75 76.09 -155.59 REMARK 500 4 PRO B 77 34.47 -81.41 REMARK 500 4 ASP B 78 -168.66 -165.33 REMARK 500 4 ARG B 96 12.15 -157.24 REMARK 500 4 MET B 98 85.64 43.91 REMARK 500 4 ASN B 107 -7.66 73.43 REMARK 500 5 HIS A 8 91.82 20.57 REMARK 500 5 VAL A 9 -22.19 -163.77 REMARK 500 5 VAL A 12 19.02 50.27 REMARK 500 5 ARG A 71 -81.57 -112.92 REMARK 500 5 PRO B 77 32.57 -93.67 REMARK 500 5 ASP B 78 -168.38 -164.93 REMARK 500 5 ALA B 95 16.91 50.94 REMARK 500 6 MET A 3 93.57 64.02 REMARK 500 6 SER A 4 85.58 -154.27 REMARK 500 6 HIS A 11 -14.47 71.21 REMARK 500 6 VAL A 12 -68.91 62.18 REMARK 500 6 ASN A 18 -82.58 -87.20 REMARK 500 6 ARG A 71 -97.91 -133.49 REMARK 500 6 PRO B 77 48.42 -90.63 REMARK 500 6 HIS B 90 -74.17 -101.83 REMARK 500 6 PRO B 106 98.98 -67.51 REMARK 500 7 SER A 4 -62.74 70.90 REMARK 500 7 HIS A 8 75.01 46.99 REMARK 500 7 VAL A 9 -14.92 158.83 REMARK 500 7 VAL A 12 -47.65 59.61 REMARK 500 7 ARG A 71 -91.36 -132.75 REMARK 500 7 ALA B 99 -77.21 -75.12 REMARK 500 7 HIS B 101 24.54 -175.17 REMARK 500 8 HIS A 8 63.63 -176.57 REMARK 500 8 VAL A 12 18.75 54.30 REMARK 500 8 PRO A 16 -70.71 -29.15 REMARK 500 8 ASP B 78 -167.51 -104.87 REMARK 500 8 HIS B 90 -76.23 -118.44 REMARK 500 8 ASN B 97 -78.21 -95.34 REMARK 500 8 GLU B 100 36.58 -94.06 REMARK 500 8 PRO B 106 48.23 -69.69 REMARK 500 9 HIS A 2 -53.26 72.13 REMARK 500 9 LYS A 7 40.26 -99.30 REMARK 500 9 HIS A 8 69.00 -117.85 REMARK 500 9 HIS A 11 -6.05 70.54 REMARK 500 9 VAL A 12 -38.77 62.21 REMARK 500 9 ARG B 96 -83.15 62.57 REMARK 500 9 ASN B 97 22.89 -150.65 REMARK 500 9 GLU B 100 166.31 70.40 REMARK 500 9 ASN B 107 96.83 60.71 REMARK 500 10 PHE A 6 -166.61 -111.70 REMARK 500 10 VAL A 9 -37.98 81.67 REMARK 500 10 HIS A 11 90.52 -59.13 REMARK 500 10 ARG A 71 -78.68 -129.40 REMARK 500 11 LYS A 7 136.95 76.13 REMARK 500 11 SER A 10 88.58 -35.90 REMARK 500 11 HIS A 11 -48.48 -152.40 REMARK 500 11 VAL A 12 -21.89 70.40 REMARK 500 11 PRO A 16 -75.00 -28.57 REMARK 500 11 ARG A 71 -86.16 -120.62 REMARK 500 11 MET B 75 -73.34 -40.53 REMARK 500 11 ASN B 97 -90.32 68.65 REMARK 500 12 VAL A 9 -28.92 164.85 REMARK 500 12 HIS A 11 -8.35 69.23 REMARK 500 12 VAL A 12 9.34 59.59 REMARK 500 12 ARG A 71 -81.31 -99.78 REMARK 500 12 MET B 75 146.07 -177.69 REMARK 500 12 LEU B 76 -76.33 -148.39 REMARK 500 12 ASP B 78 -166.65 -165.92 REMARK 500 12 ALA B 99 -74.51 65.39 REMARK 500 13 SER A 4 162.02 74.75 REMARK 500 13 HIS B 90 -61.10 -101.92 REMARK 500 13 ASN B 97 -37.20 -173.05 REMARK 500 13 GLU B 100 137.46 69.93 REMARK 500 14 LYS A 7 -91.53 46.09 REMARK 500 14 HIS A 8 60.43 -155.57 REMARK 500 14 VAL A 12 5.54 58.47 REMARK 500 14 ARG A 71 -55.37 -123.62 REMARK 500 14 HIS B 74 -79.16 -129.28 REMARK 500 14 MET B 75 -84.20 -129.99 REMARK 500 14 HIS B 90 -74.20 -104.58 REMARK 500 14 ALA B 95 -69.03 65.04 REMARK 500 14 ARG B 96 -16.44 78.05 REMARK 500 14 ASN B 97 -41.41 72.18 REMARK 500 15 MET A 3 -70.27 -96.15 REMARK 500 15 SER A 4 -39.94 171.51 REMARK 500 15 LYS A 7 159.16 68.88 REMARK 500 15 VAL A 12 -74.42 63.66 REMARK 500 15 ASN A 24 45.96 -99.10 REMARK 500 15 ARG A 71 -62.58 -135.28 REMARK 500 15 ASP B 78 -167.38 -160.12 REMARK 500 15 ALA B 95 84.52 -66.02 REMARK 500 15 ARG B 96 -88.11 -88.03 REMARK 500 15 ASN B 97 -26.36 177.13 REMARK 500 16 MET A 3 61.48 -101.48 REMARK 500 16 VAL A 12 -11.46 68.27 REMARK 500 16 ARG A 71 -83.35 -126.86 REMARK 500 16 ALA B 95 71.58 -153.61 REMARK 500 16 ARG B 96 48.31 -80.95 REMARK 500 16 ASN B 107 -53.97 -146.30 REMARK 500 17 SER A 10 -48.25 71.58 REMARK 500 17 VAL A 12 -89.94 56.07 REMARK 500 17 ARG A 71 -74.77 -134.05 REMARK 500 17 HIS B 74 174.86 65.63 REMARK 500 17 LEU B 76 147.66 73.77 REMARK 500 17 MET B 98 -177.06 67.82 REMARK 500 17 ASN B 107 172.05 69.78 REMARK 500 18 VAL A 12 -72.37 60.18 REMARK 500 18 ARG A 71 -79.94 -128.17 REMARK 500 18 MET B 75 32.62 -85.60 REMARK 500 18 ASP B 78 -168.87 -118.78 REMARK 500 18 ALA B 95 31.82 -82.27 REMARK 500 18 ASN B 97 -77.24 -159.24 REMARK 500 18 MET B 98 79.47 -156.28 REMARK 500 18 GLU B 100 -153.57 -135.38 REMARK 500 18 ASN B 107 -57.04 172.77 REMARK 500 19 HIS A 2 100.07 69.94 REMARK 500 19 MET A 3 -156.01 -87.75 REMARK 500 19 LYS A 7 -73.57 66.78 REMARK 500 19 HIS A 8 48.58 -88.90 REMARK 500 19 VAL A 12 -65.43 45.11 REMARK 500 19 HIS B 74 59.13 -143.25 REMARK 500 19 PRO B 77 34.39 -85.66 REMARK 500 19 ASP B 78 -168.11 -163.88 REMARK 500 19 HIS B 90 -97.36 -125.62 REMARK 500 20 VAL A 12 34.60 39.39 REMARK 500 20 ARG A 71 -77.94 -115.56 REMARK 500 20 HIS B 74 -97.25 -101.51 REMARK 500 20 MET B 98 -71.00 -66.81 REMARK 500 20 ALA B 99 -80.90 60.96 REMARK 500 20 GLU B 100 -178.11 60.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 13 TYR A 53 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
DBREF 2K42 A 4 72 UNP P42768 WASP_HUMAN 242 310 DBREF 2K42 B 76 108 UNP Q8X2D5 Q8X2D5_ECO57 268 300
SEQADV 2K42 GLY A 1 UNP P42768 EXPRESSION TAG SEQADV 2K42 HIS A 2 UNP P42768 EXPRESSION TAG SEQADV 2K42 MET A 3 UNP P42768 EXPRESSION TAG SEQADV 2K42 GLY B 73 UNP Q8X2D5 EXPRESSION TAG SEQADV 2K42 HIS B 74 UNP Q8X2D5 EXPRESSION TAG SEQADV 2K42 MET B 75 UNP Q8X2D5 EXPRESSION TAG
SEQRES 1 A 72 GLY HIS MET SER GLY PHE LYS HIS VAL SER HIS VAL GLY SEQRES 2 A 72 TRP ASP PRO GLN ASN GLY PHE ASP VAL ASN ASN LEU ASP SEQRES 3 A 72 PRO ASP LEU ARG SER LEU PHE SER ARG ALA GLY ILE SER SEQRES 4 A 72 GLU ALA GLN LEU THR ASP ALA GLU THR SER LYS LEU ILE SEQRES 5 A 72 TYR ASP PHE ILE GLU ASP GLN GLY GLY LEU GLU ALA VAL SEQRES 6 A 72 ARG GLN GLU MET ARG ARG GLN SEQRES 1 B 36 GLY HIS MET LEU PRO ASP VAL ALA GLN ARG LEU MET GLN SEQRES 2 B 36 HIS LEU ALA GLU HIS GLY ILE GLN PRO ALA ARG ASN MET SEQRES 3 B 36 ALA GLU HIS ILE PRO PRO ALA PRO ASN TRP
HELIX 1 1 ASP A 26 GLY A 37 1 12 HELIX 2 2 SER A 39 THR A 44 1 6 HELIX 3 3 ASP A 45 GLN A 59 1 15 HELIX 4 4 GLY A 61 ARG A 70 1 10 HELIX 5 5 ASP B 78 GLU B 89 1 12
SHEET 1 A 2 TRP A 14 ASP A 15 0 SHEET 2 A 2 GLY A 19 PHE A 20 -1 O GLY A 19 N ASP A 15
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000