10 20 30 40 50 60 70 80 2K3B - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL PROTEIN 30-APR-08 2K3B
TITLE SEEING THE INVISIBLE: STRUCTURES OF EXCITED PROTEIN STATES TITLE 2 BY RELAXATION DISPERSION NMR
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 GENE: ABP1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET32B
KEYWDS CPMG, ABP1P, ARK1P, INVISIBLE STATE, NMR, ACETYLATION, KEYWDS 2 ACTIN-BINDING, CYTOPLASM, CYTOSKELETON, PHOSPHOPROTEIN, SH3 KEYWDS 3 DOMAIN, STRUCTURAL PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR P.VALLURUPALLI,F.D.HANSEN,L.E.KAY
REVDAT 3 24-FEB-09 2K3B 1 VERSN REVDAT 2 26-AUG-08 2K3B 1 JRNL REVDAT 1 29-JUL-08 2K3B 0
JRNL AUTH P.VALLURUPALLI,D.F.HANSEN,L.E.KAY JRNL TITL STRUCTURES OF INVISIBLE, EXCITED PROTEIN STATES BY JRNL TITL 2 RELAXATION DISPERSION NMR SPECTROSCOPY JRNL REF PROC.NATL.ACAD.SCI.USA V. 105 11766 2008 JRNL REFN ISSN 0027-8424 JRNL PMID 18701719 JRNL DOI 10.1073/PNAS.0804221105
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR_NIH 2.19 REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2K3B COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-08. REMARK 100 THE RCSB ID CODE IS RCSB100622.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 278 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : ~0.150 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : ~1.5 MM [90 % U 2H; ~100% U REMARK 210 15N] ABP1P, ~0.105 MM [90% U REMARK 210 2H; ~100% U 15N] ARK1P, 90% REMARK 210 H2O/10% D2O; ~1.5 MM [90 % U REMARK 210 2H; ~100% U 15N] ABP1P, ~0.105 REMARK 210 MM ARK1P, 90% H2O/10% D2O; ~ REMARK 210 1.5 MM [90 % U 2H; ~100% U REMARK 210 15N; 13CO LABELED] ABP1P, ~ REMARK 210 0.105 MM ARK1P, 90% H2O/10% REMARK 210 D2O; ~1.5 MM [90 % U 2H; ~100% REMARK 210 U 15N; 13CA LABELED] ABP1P, ~ REMARK 210 0.105 MM ARK1P, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 15N CT-CW,TROSY,ANTI-TROSY REMARK 210 CPMG, 13CO CT-INPHASE,TROSY, REMARK 210 ANTI-TROSY CPMG, 13CA CT-CW, REMARK 210 TROSY,ANTI-TROSY CPMG REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 800 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR_NIH 2.19 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 960 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 ALA A -1 REMARK 465 MET A 0
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 ASP A 35 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 2 ASP A 35 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 3 ASP A 35 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 4 ASP A 35 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 5 ASP A 35 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 6 ASP A 35 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 7 ASP A 35 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 8 ASP A 35 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 9 ASP A 35 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 10 ASP A 35 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 23 -8.92 80.39 REMARK 500 1 ASP A 44 -0.72 -145.87 REMARK 500 2 ASN A 23 -8.92 80.39 REMARK 500 2 ASP A 44 -0.71 -145.83 REMARK 500 3 ASN A 23 -8.92 80.42 REMARK 500 3 ASP A 44 -0.70 -145.94 REMARK 500 4 ASN A 23 -8.92 80.50 REMARK 500 4 ASP A 44 -0.71 -145.83 REMARK 500 5 ASN A 23 -8.92 80.39 REMARK 500 5 ASP A 44 -0.62 -145.85 REMARK 500 6 ASN A 23 -8.94 80.43 REMARK 500 6 ASP A 44 -0.63 -145.91 REMARK 500 7 ASN A 23 -8.85 80.31 REMARK 500 7 ASP A 44 -0.72 -145.95 REMARK 500 8 ASN A 23 -8.93 80.38 REMARK 500 8 ASP A 44 -0.80 -145.82 REMARK 500 9 ASN A 23 -8.92 80.45 REMARK 500 9 ASP A 44 -0.75 -145.86 REMARK 500 10 ASN A 23 -8.96 80.41 REMARK 500 10 ASP A 44 -0.66 -145.90 REMARK 500 REMARK 500 REMARK: NULL
DBREF 2K3B A 2 59 UNP P15891 ABP1_YEAST 535 592
SEQADV 2K3B GLY A -2 UNP P15891 EXPRESSION TAG SEQADV 2K3B ALA A -1 UNP P15891 EXPRESSION TAG SEQADV 2K3B MET A 0 UNP P15891 EXPRESSION TAG SEQADV 2K3B ALA A 1 UNP P15891 EXPRESSION TAG
SEQRES 1 A 62 GLY ALA MET ALA PRO TRP ALA THR ALA GLU TYR ASP TYR SEQRES 2 A 62 ASP ALA ALA GLU ASP ASN GLU LEU THR PHE VAL GLU ASN SEQRES 3 A 62 ASP LYS ILE ILE ASN ILE GLU PHE VAL ASP ASP ASP TRP SEQRES 4 A 62 TRP LEU GLY GLU LEU GLU LYS ASP GLY SER LYS GLY LEU SEQRES 5 A 62 PHE PRO SER ASN TYR VAL SER LEU GLY ASN
SHEET 1 A 5 LYS A 47 PRO A 51 0 SHEET 2 A 5 TRP A 36 LEU A 41 -1 N TRP A 37 O PHE A 50 SHEET 3 A 5 LYS A 25 GLU A 30 -1 N ILE A 27 O GLU A 40 SHEET 4 A 5 ALA A 4 ALA A 6 -1 N ALA A 4 O ILE A 26 SHEET 5 A 5 VAL A 55 LEU A 57 -1 O SER A 56 N THR A 5
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000