2JYF - Header Asymmetric Unit

HEADER RNA/RNA 13-DEC-07 2JYF

TITLE TETRALOOP-RECEPTOR RNA COMPLEX

COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (43-MER); COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES

KEYWDS RNA STRUCTURE, RNA:RNA COMPLEX, TETRALOOP-RECEPTOR, GAAA- KEYWDS 2 TETRALOOP, RNA GLOBAL STRUCTURE, COMPLEX INTERFACE, RNA/RNA KEYWDS 3 COMPLEX

EXPDTA SOLUTION NMR

NUMMDL 10

AUTHOR X.ZUO,J.WANG,T.R.FOSTER,C.D.SCHWIETERS,D.M.TIEDE

REVDAT 2 24-FEB-09 2JYF 1 VERSN REVDAT 1 07-OCT-08 2JYF 0

JRNL AUTH X.ZUO,J.WANG,T.R.FOSTER,C.D.SCHWIETERS,D.M.TIEDE, JRNL AUTH 2 S.E.BUTCHER,Y.WANG JRNL TITL TETRALOOP-RECEPTOR RNA COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR_NIH NOT RELEASED, DEFINE_THE_ REMARK 3 INTERMOLECULAR_INTERFACE_USING_SAXS_DATA REMARK 3 AUTHORS : SCHWIETERS, C.D. ET AL. (X-PLOR_NIH), WANG, J. REMARK 3 ET AL. (DEFINE_THE_INTERMOLECULAR_INTERFACE_USING_SAXS_DATA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES WERE REFINED AGAINST REMARK 3 THE SAXS DATA AND NMR-DERIVED RESTRAINTS.

REMARK 4 REMARK 4 2JYF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-DEC-07. REMARK 100 THE RCSB ID CODE IS RCSB100446.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 20 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 8 MG/ML (W/V) RNA:RNA REMARK 210 COMPLEX, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ, 750 MHZ REMARK 210 SPECTROMETER MODEL : DRX, UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : BRUKER, VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR_NIH NOT RELEASED, REMARK 210 DEFINE_THE_INTERMOLECULAR_INTERFACE_USING_SAXS_DATA REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JYH RELATED DB: PDB

DBREF 2JYF A 1 43 PDB 2JYF 2JYF 1 43 DBREF 2JYF B 44 86 PDB 2JYF 2JYF 44 86

SEQRES 1 A 43 G G G A U A U G G A A G A SEQRES 2 A 43 A C C G G G G A A A C U U SEQRES 3 A 43 G G U U C U U C C U A A G SEQRES 4 A 43 U C C U SEQRES 1 B 43 G G G A U A U G G A A G A SEQRES 2 B 43 A C C G G G G A A A C U U SEQRES 3 B 43 G G U U C U U C C U A A G SEQRES 4 B 43 U C C U

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000