10 20 30 40 50 60 70 80 2JXF - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER VIRAL PROTEIN, MEMBRANE PROTEIN 19-NOV-07 2JXF
TITLE THE SOLUTION STRUCTURE OF HCV NS4B(40-69)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENOME POLYPROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NON-STRUCTURAL PROTEIN 4B, UNP RESIDUES 1751- COMPND 5 1780; COMPND 6 SYNONYM: NS4B(40-69); COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE PEPTIDE WAS SYNTHESIZED BY SOLID-PHASE SOURCE 4 SYNTHESIS; FREE N AND C TERMINI
KEYWDS MEMBRANE ASSOCIATED SEGMENT, ACETYLATION, APOPTOSIS, ATP- KEYWDS 2 BINDING, CAPSID PROTEIN, CYTOPLASM, ENDOPLASMIC RETICULUM, KEYWDS 3 ENVELOPE PROTEIN, FUSION PROTEIN, GLYCOPROTEIN, HELICASE, KEYWDS 4 HOST-VIRUS INTERACTION, HYDROLASE, INTERFERON ANTIVIRAL KEYWDS 5 SYSTEM EVASION, LIPID DROPLET, LIPOPROTEIN, METAL-BINDING, KEYWDS 6 MITOCHONDRION, MULTIFUNCTIONAL ENZYME, NUCLEOTIDE-BINDING, KEYWDS 7 NUCLEOTIDYLTRANSFERASE, NUCLEUS, ONCOGENE, PALMITATE, KEYWDS 8 PHOSPHOPROTEIN, PROTEASE, RIBONUCLEOPROTEIN, RNA KEYWDS 9 REPLICATION, RNA-BINDING, RNA-DIRECTED RNA POLYMERASE, KEYWDS 10 SECRETED, SERINE PROTEASE, SH3-BINDING, THIOL PROTEASE, KEYWDS 11 TRANSCRIPTION, TRANSCRIPTION REGULATION, TRANSFERASE, KEYWDS 12 TRANSMEMBRANE, UBL CONJUGATION, VIRAL NUCLEOPROTEIN, VIRION, KEYWDS 13 ZINC, VIRAL PROTEIN, MEMBRANE PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 30
AUTHOR R.MONTSERRET,F.PENIN
REVDAT 3 26-MAY-09 2JXF 1 JRNL REVDAT 2 24-FEB-09 2JXF 1 VERSN REVDAT 1 25-NOV-08 2JXF 0
JRNL AUTH J.GOUTTENOIRE,V.CASTET,R.MONTSERRET,N.ARORA, JRNL AUTH 2 V.RAUSSENS,J.-M.RUYSSCHAERT,E.DIESIS,H.E.BLUM, JRNL AUTH 3 F.PENIN,D.MORADPOUR JRNL TITL IDENTIFICATION OF A NOVEL DETERMINANT FOR MEMBRANE JRNL TITL 2 ASSOCIATION IN HEPATITIS C VIRUS NONSTRUCTURAL JRNL TITL 3 PROTEIN 4B JRNL REF J.VIROL. V. 83 6257 2009 JRNL REFN ISSN 0022-538X JRNL PMID 19357161 JRNL DOI 10.1128/JVI.02663-08
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR_NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2JXF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-NOV-07. REMARK 100 THE RCSB ID CODE IS RCSB100411.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM NS4B(40-69); 50% V/V REMARK 210 TRIFLUORO ETHANOL D2OH; 50% V/ REMARK 210 V H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 2D 1H-1H REMARK 210 TOCSY; 2D 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR, SPARKY, X-PLOR_NIH REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 30 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 2 -119.59 -154.18 REMARK 500 2 THR A 2 -105.05 -142.21 REMARK 500 2 LEU A 28 51.34 -101.57 REMARK 500 3 THR A 2 -131.67 -172.80 REMARK 500 3 LEU A 28 63.48 -169.67 REMARK 500 4 THR A 2 -52.09 -153.09 REMARK 500 4 ASN A 3 -45.82 84.55 REMARK 500 5 THR A 2 -119.92 -124.61 REMARK 500 5 ASN A 3 6.35 58.72 REMARK 500 5 LEU A 28 62.08 -119.45 REMARK 500 6 THR A 2 -107.44 -92.17 REMARK 500 6 ASN A 3 -4.68 66.86 REMARK 500 7 THR A 2 -109.49 51.95 REMARK 500 7 ASN A 3 -45.77 -156.37 REMARK 500 7 LEU A 28 49.62 -102.42 REMARK 500 8 THR A 2 -64.74 -139.79 REMARK 500 9 ALA A 26 45.96 -86.62 REMARK 500 9 LEU A 28 17.82 55.28 REMARK 500 9 SER A 29 152.20 173.74 REMARK 500 10 THR A 2 -63.17 66.47 REMARK 500 10 ASN A 3 -50.08 81.73 REMARK 500 10 SER A 29 -160.90 58.47 REMARK 500 11 LEU A 25 -51.06 -120.45 REMARK 500 11 SER A 29 -60.45 -161.69 REMARK 500 12 THR A 2 -119.78 -155.86 REMARK 500 12 SER A 29 168.83 61.58 REMARK 500 13 THR A 2 -116.51 -158.89 REMARK 500 13 ALA A 26 44.66 -78.97 REMARK 500 14 THR A 2 -108.97 -144.18 REMARK 500 15 THR A 2 -121.97 -109.26 REMARK 500 16 THR A 2 -100.71 -143.62 REMARK 500 16 SER A 29 -86.82 -80.59 REMARK 500 17 ASN A 3 -52.62 77.79 REMARK 500 17 SER A 29 -64.29 68.33 REMARK 500 18 THR A 2 -117.74 -141.92 REMARK 500 18 LEU A 28 48.95 -103.95 REMARK 500 19 SER A 29 -160.76 60.91 REMARK 500 20 LEU A 28 49.55 -101.71 REMARK 500 21 LEU A 28 59.32 -116.54 REMARK 500 22 THR A 2 -89.57 -101.69 REMARK 500 22 LEU A 28 45.54 -98.53 REMARK 500 23 THR A 2 -98.85 55.71 REMARK 500 23 SER A 29 -165.15 59.06 REMARK 500 24 THR A 2 -119.82 -162.39 REMARK 500 25 ALA A 26 42.37 -82.59 REMARK 500 26 THR A 2 -115.47 -161.10 REMARK 500 26 GLN A 23 44.98 -92.71 REMARK 500 26 TYR A 24 -54.94 -153.19 REMARK 500 27 ALA A 26 46.59 -79.62 REMARK 500 27 SER A 29 -156.25 -90.33 REMARK 500 28 THR A 2 -120.55 -165.23 REMARK 500 29 THR A 2 -115.20 -144.21 REMARK 500 30 THR A 2 -116.47 -164.90 REMARK 500 30 SER A 29 -91.03 62.85 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15559 RELATED DB: BMRB
DBREF 2JXF A 1 30 UNP P27958 POLG_HCVH 1751 1780
SEQRES 1 A 30 GLN THR ASN TRP GLN LYS LEU GLU VAL PHE TRP ALA LYS SEQRES 2 A 30 HIS MET TRP ASN PHE ILE SER GLY ILE GLN TYR LEU ALA SEQRES 3 A 30 GLY LEU SER THR
HELIX 1 1 THR A 2 LEU A 28 1 27
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000