10 20 30 40 50 60 70 80 2JTD - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER CELL ADHESION 27-JUL-07 2JTD
TITLE SKELEMIN IMMUNOGLOBULIN C2 LIKE DOMAIN 4
COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYOMESIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES:1207-1328; COMPND 5 SYNONYM: SKELEMIN; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MYOM1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET15B
KEYWDS SKELEMIN, IMMUNOGLOBULIN DOMAIN, MUSCLE PROTEIN, THICK KEYWDS 2 FILAMENT, IMMUNE SYSTEM, CELL ADHESION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR L.DESHMUKH,O.VINOGRADOVA
REVDAT 3 19-MAY-09 2JTD 1 JRNL REVDAT 2 24-FEB-09 2JTD 1 VERSN REVDAT 1 04-SEP-07 2JTD 0
JRNL AUTH L.DESHMUKH,S.TYUKHTENKO,J.LIU,J.E.FOX,J.QIN, JRNL AUTH 2 O.VINOGRADOVA JRNL TITL STRUCTURAL INSIGHT INTO THE INTERACTION BETWEEN JRNL TITL 2 PLATELET INTEGRIN ALPHAIIBBETA3 AND CYTOSKELETAL JRNL TITL 3 PROTEIN SKELEMIN. JRNL REF J.BIOL.CHEM. V. 282 32349 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17804417 JRNL DOI 10.1074/JBC.M704666200
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: LINGE ET AL,PROTEINS:STRUCTURE, REMARK 3 FUNCTION AND GENETICS 50:496-506(2003)
REMARK 4 REMARK 4 2JTD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-AUG-07. REMARK 100 THE RCSB ID CODE IS RCSB100265.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 7.2 REMARK 210 IONIC STRENGTH : 1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2.7 MM POTASSIUM CHLORIDE, REMARK 210 140 MM SODIUM CHLORIDE, 10 MM REMARK 210 SODIUM PHOSPHATE, 1.8 MM REMARK 210 POTASSIUM PHOSPHATE, 95% H2O/ REMARK 210 5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D HNCA; 3D HNCACB; REMARK 210 3D HCCH-TOCSY; 3D HNHA; 3D 1H- REMARK 210 15N NOESY; 3D 1H-13C NOESY; 3D REMARK 210 H(CC) (CO) NH; 3D (H) CC (CO) REMARK 210 NH REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1 REMARK 210 METHOD USED : REFINEMENT IN EXPLICIT SOLVENT REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 60 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 2 -56.25 -166.59 REMARK 500 1 HIS A 14 -59.69 -127.45 REMARK 500 1 PRO A 17 -77.41 -14.45 REMARK 500 1 LEU A 44 -60.46 -109.29 REMARK 500 1 ALA A 48 97.01 68.29 REMARK 500 1 GLU A 81 -92.52 -97.94 REMARK 500 1 LYS A 82 152.05 177.23 REMARK 500 1 LEU A 83 -73.02 -117.74 REMARK 500 2 SER A 11 47.18 -98.21 REMARK 500 2 GLN A 12 147.92 69.49 REMARK 500 2 HIS A 14 28.11 173.29 REMARK 500 2 PRO A 17 43.31 -66.31 REMARK 500 2 PRO A 20 52.11 -67.81 REMARK 500 2 THR A 21 -90.33 -151.96 REMARK 500 2 LYS A 22 14.59 -162.60 REMARK 500 2 ARG A 71 -50.86 -143.65 REMARK 500 2 GLU A 81 -99.44 -128.39 REMARK 500 2 LEU A 83 -77.15 -96.99 REMARK 500 2 LYS A 99 -45.43 -138.71 REMARK 500 3 SER A 46 30.68 -70.71 REMARK 500 3 LYS A 82 162.06 166.82 REMARK 500 3 LEU A 83 -72.44 -137.42 REMARK 500 3 LYS A 99 -66.15 -127.60 REMARK 500 4 LEU A 10 98.91 -66.66 REMARK 500 4 GLN A 12 93.54 64.96 REMARK 500 4 HIS A 14 105.15 -161.98 REMARK 500 4 THR A 21 -172.52 177.89 REMARK 500 4 LEU A 44 -73.23 -109.48 REMARK 500 4 SER A 46 -84.27 -162.67 REMARK 500 4 PRO A 63 -75.60 -53.43 REMARK 500 4 GLU A 81 -61.52 -134.10 REMARK 500 4 LYS A 82 161.53 179.16 REMARK 500 4 LEU A 83 -72.41 -149.86 REMARK 500 4 LYS A 99 -35.37 -134.58 REMARK 500 5 PRO A 17 -159.18 -98.62 REMARK 500 5 LEU A 44 -86.08 -108.77 REMARK 500 5 SER A 46 -97.29 -165.38 REMARK 500 5 GLU A 81 -62.80 -129.76 REMARK 500 5 LYS A 82 154.05 175.03 REMARK 500 5 LEU A 83 -70.00 -132.76 REMARK 500 5 ASP A 97 -163.32 -109.54 REMARK 500 5 LYS A 99 -29.49 76.59 REMARK 500 5 ALA A 120 -67.01 -93.45 REMARK 500 6 GLU A 13 32.48 -89.90 REMARK 500 6 PRO A 17 49.90 -75.78 REMARK 500 6 PRO A 20 30.96 -72.38 REMARK 500 6 SER A 46 -175.87 -175.70 REMARK 500 6 GLU A 56 -19.57 77.81 REMARK 500 6 PRO A 63 -61.92 -92.03 REMARK 500 6 THR A 73 -37.78 -135.14 REMARK 500 6 GLU A 81 -165.84 -125.75 REMARK 500 7 SER A 11 -96.41 -145.03 REMARK 500 7 HIS A 14 60.82 -173.38 REMARK 500 7 THR A 21 -111.51 -95.00 REMARK 500 7 GLU A 31 2.07 -69.14 REMARK 500 7 SER A 46 5.65 -63.34 REMARK 500 7 GLU A 81 -168.46 -108.06 REMARK 500 7 LEU A 83 -74.26 -108.93 REMARK 500 7 GLU A 121 -163.93 -106.00 REMARK 500 8 GLU A 3 33.53 -90.05 REMARK 500 8 HIS A 14 70.59 -115.29 REMARK 500 8 PRO A 20 -56.84 -26.52 REMARK 500 8 THR A 21 -97.62 -98.13 REMARK 500 8 LYS A 22 15.89 -158.52 REMARK 500 8 SER A 46 -48.32 74.76 REMARK 500 8 ALA A 48 84.01 63.90 REMARK 500 8 LEU A 83 -63.97 -109.94 REMARK 500 8 ASP A 97 -62.87 -108.61 REMARK 500 8 ALA A 120 -71.08 -76.60 REMARK 500 9 PRO A 20 29.93 -75.20 REMARK 500 9 GLU A 56 -13.40 71.03 REMARK 500 9 THR A 73 -64.58 -109.30 REMARK 500 9 GLU A 81 -55.92 -137.95 REMARK 500 9 LYS A 82 160.96 167.43 REMARK 500 9 LEU A 83 -71.59 -137.00 REMARK 500 10 THR A 21 -119.66 -102.67 REMARK 500 10 GLU A 81 -169.44 -160.28 REMARK 500 10 LEU A 83 -85.86 -140.39 REMARK 500 11 SER A 11 -56.72 -158.79 REMARK 500 11 THR A 21 -159.22 -86.61 REMARK 500 11 SER A 46 -88.53 -166.92 REMARK 500 11 LEU A 83 -76.59 -132.12 REMARK 500 11 ASP A 97 -70.59 -137.95 REMARK 500 11 ALA A 120 -80.41 -66.29 REMARK 500 12 GLU A 2 68.85 -108.34 REMARK 500 12 HIS A 14 48.08 -153.87 REMARK 500 12 PRO A 17 45.77 -72.72 REMARK 500 12 SER A 46 49.19 -76.39 REMARK 500 12 LEU A 83 -159.88 -134.23 REMARK 500 13 HIS A 14 29.62 -156.37 REMARK 500 13 THR A 18 -169.81 -163.74 REMARK 500 13 SER A 45 -173.35 -178.08 REMARK 500 13 ARG A 71 35.96 -76.95 REMARK 500 13 ASN A 72 -74.21 -121.87 REMARK 500 13 LYS A 99 -64.93 -145.08 REMARK 500 14 PRO A 20 26.63 -73.30 REMARK 500 14 SER A 23 33.38 -152.89 REMARK 500 14 GLU A 31 9.11 -68.39 REMARK 500 14 SER A 46 -175.84 -170.75 REMARK 500 15 PRO A 20 96.33 -62.18 REMARK 500 15 THR A 21 160.80 172.94 REMARK 500 15 LEU A 44 -61.13 -108.82 REMARK 500 15 PRO A 63 -75.96 -61.43 REMARK 500 15 ARG A 71 -40.39 -137.35 REMARK 500 16 PRO A 63 -75.73 -67.69 REMARK 500 16 GLU A 81 -161.39 -168.48 REMARK 500 16 LEU A 83 -74.48 -138.64 REMARK 500 16 LYS A 99 -63.06 -126.38 REMARK 500 16 GLU A 121 -158.13 -126.44 REMARK 500 17 PRO A 17 -157.87 -88.38 REMARK 500 17 PRO A 20 66.75 -67.81 REMARK 500 17 THR A 21 -179.43 179.02 REMARK 500 17 LEU A 83 -68.61 -124.56 REMARK 500 18 HIS A 14 17.22 -142.39 REMARK 500 18 PRO A 17 83.00 -62.23 REMARK 500 18 GLN A 34 114.14 -165.49 REMARK 500 18 SER A 46 87.75 -66.83 REMARK 500 18 ASN A 47 -62.82 -149.50 REMARK 500 18 GLU A 56 -7.15 75.73 REMARK 500 18 ASP A 97 -69.14 -109.49 REMARK 500 19 SER A 11 -166.29 -117.68 REMARK 500 19 THR A 21 -98.26 -85.68 REMARK 500 19 LYS A 22 -4.89 -147.59 REMARK 500 19 SER A 46 -176.58 -172.85 REMARK 500 19 LEU A 83 -74.25 -134.65 REMARK 500 19 ASP A 97 77.88 -108.87 REMARK 500 20 LEU A 10 109.39 -47.30 REMARK 500 20 SER A 23 34.45 -153.15 REMARK 500 20 SER A 46 -169.62 174.75 REMARK 500 20 LYS A 99 -38.97 -131.50 REMARK 500 REMARK 500 REMARK: NULL
DBREF 2JTD A 1 122 UNP Q62234 MYOM1_MOUSE 1207 1328
SEQADV 2JTD GLY A -19 UNP Q62234 EXPRESSION TAG SEQADV 2JTD SER A -18 UNP Q62234 EXPRESSION TAG SEQADV 2JTD SER A -17 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -16 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -15 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -14 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -13 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -12 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -11 UNP Q62234 EXPRESSION TAG SEQADV 2JTD SER A -10 UNP Q62234 EXPRESSION TAG SEQADV 2JTD SER A -9 UNP Q62234 EXPRESSION TAG SEQADV 2JTD GLY A -8 UNP Q62234 EXPRESSION TAG SEQADV 2JTD LEU A -7 UNP Q62234 EXPRESSION TAG SEQADV 2JTD VAL A -6 UNP Q62234 EXPRESSION TAG SEQADV 2JTD PRO A -5 UNP Q62234 EXPRESSION TAG SEQADV 2JTD ARG A -4 UNP Q62234 EXPRESSION TAG SEQADV 2JTD GLY A -3 UNP Q62234 EXPRESSION TAG SEQADV 2JTD SER A -2 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -1 UNP Q62234 EXPRESSION TAG SEQADV 2JTD MET A 0 UNP Q62234 EXPRESSION TAG
SEQRES 1 A 142 GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU SEQRES 2 A 142 VAL PRO ARG GLY SER HIS MET GLU GLU GLU MET LYS ARG SEQRES 3 A 142 LEU LEU ALA LEU SER GLN GLU HIS LYS PHE PRO THR VAL SEQRES 4 A 142 PRO THR LYS SER GLU LEU ALA VAL GLU ILE LEU GLU LYS SEQRES 5 A 142 GLY GLN VAL ARG PHE TRP MET GLN ALA GLU LYS LEU SER SEQRES 6 A 142 SER ASN ALA LYS VAL SER TYR ILE PHE ASN GLU LYS GLU SEQRES 7 A 142 ILE PHE GLU GLY PRO LYS TYR LYS MET HIS ILE ASP ARG SEQRES 8 A 142 ASN THR GLY ILE ILE GLU MET PHE MET GLU LYS LEU GLN SEQRES 9 A 142 ASP GLU ASP GLU GLY THR TYR THR PHE GLN ILE GLN ASP SEQRES 10 A 142 GLY LYS ALA THR GLY HIS SER THR LEU VAL LEU ILE GLY SEQRES 11 A 142 ASP VAL TYR LYS LYS LEU GLN LYS GLU ALA GLU PHE
HELIX 1 1 MET A 4 LEU A 10 1 7 HELIX 2 2 ILE A 109 GLU A 121 1 13
SHEET 1 A 4 GLU A 24 LEU A 30 0 SHEET 2 A 4 GLN A 34 GLN A 40 -1 O ARG A 36 N GLU A 28 SHEET 3 A 4 ILE A 76 MET A 80 -1 O MET A 78 N PHE A 37 SHEET 4 A 4 MET A 67 ILE A 69 -1 N HIS A 68 O GLU A 77 SHEET 1 B 4 LYS A 57 GLU A 58 0 SHEET 2 B 4 LYS A 49 PHE A 54 -1 N PHE A 54 O LYS A 57 SHEET 3 B 4 THR A 90 ASP A 97 -1 O THR A 92 N ILE A 53 SHEET 4 B 4 ALA A 100 VAL A 107 -1 O LEU A 106 N TYR A 91
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000