10 20 30 40 50 60 70 80 2JO8 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 26-FEB-07 2JO8
TITLE SOLUTION STRUCTURE OF C-TERMINAL DOMAIN OF HUMAN MAMMALIAN TITLE 2 STERILE 20-LIKE KINASE 1 (MST1)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE 4; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C-TERMINAL SARAH DOMAIN, DATABASE RESIDUES 432- COMPND 5 480; COMPND 6 SYNONYM: STE20-LIKE KINASE MST1, MST-1, MAMMALIAN STE20- COMPND 7 LIKE PROTEIN KINASE 1, SERINE/THREONINE-PROTEIN KINASE KRS- COMPND 8 2; COMPND 9 EC: 2.7.11.1; COMPND 10 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: STK4, MST1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PGEX4T-1
KEYWDS PROTEIN, C-TERMINAL DOMAIN, HUMAN MAMMALIAN STERILE 20-LIKE KEYWDS 2 KINASE 1, DIMER, TRANSFERASE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR E.HWANG,K.-S.RYU,K.PAAKKONEN,P.GUNTERT,H.-K.CHEONG,D.-S.LIM, AUTHOR 2 J.O.LEE,Y.H.JEON,C.CHEONG
REVDAT 3 24-FEB-09 2JO8 1 VERSN REVDAT 2 19-JUN-07 2JO8 1 JRNL REVDAT 1 15-MAY-07 2JO8 0
JRNL AUTH E.HWANG,K.-S.RYU,K.PAAKKONEN,P.GUNTERT,H.-K.CHEONG, JRNL AUTH 2 D.-S.LIM,J.-O.LEE,Y.H.JEON,C.CHEONG JRNL TITL STRUCTURAL INSIGHT INTO DIMERIC INTERACTION OF THE JRNL TITL 2 SARAH DOMAINS FROM MST1 AND RASSF FAMILY PROTEINS JRNL TITL 3 IN THE APOPTOSIS PATHWAY JRNL REF PROC.NATL.ACAD.SCI.USA V. 104 9236 2007 JRNL REFN ISSN 0027-8424 JRNL PMID 17517604 JRNL DOI 10.1073/PNAS.0610716104
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : OPAL REMARK 3 AUTHORS : LUGINBUHL, GUNTERT, BILLETER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2JO8 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-07. REMARK 100 THE RCSB ID CODE IS RCSB100080.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 125 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-13C; U-15N] C- REMARK 210 TERMINAL DOMAIN OF MAMMALIAN REMARK 210 STERILE 20-LIKE KINASE 1, 100 REMARK 210 MM SODIUM CHLORIDE, 2 MM DTT, REMARK 210 25 MM HEPES, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D CBCA(CO)NH, 3D CBCANH, 3D REMARK 210 HN(CA)CO, 3D HNCO, 3D HNCA, 3D REMARK 210 HBHA(CO)NH, 3D H(CCO)NH, 3D REMARK 210 C(CCO)NH, 3D HCCH-COSY, 3D CCH REMARK 210 -TOCSY, 3D HCCH-TOCSY, 3D 1H- REMARK 210 15N NOESY, 3D 1H-13C NOESY, 2D REMARK 210 1H-15N HSQC, 2D 1H-13C HSQC, REMARK 210 3D FILTER-EDITED 1H-15N NOESY, REMARK 210 3D FILTER-EDITED 1H-13C NOESY, REMARK 210 2D IPAP-1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 800 MHZ, 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE, AVANCE II REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1, NMRPIPE, SPARKY, REMARK 210 TALOS, TOPSPIN REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 2 ARG A 18 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 2 ARG A 18 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 10 ARG B 134 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 17 ARG A 18 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 19 ARG B 141 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 3 TYR B 104 -0.87 -142.64 REMARK 500 5 TYR B 104 13.40 -153.60 REMARK 500 5 PHE B 106 2.27 -67.91 REMARK 500 6 SER A 2 -62.34 -106.01 REMARK 500 6 SER B 102 -144.77 -86.60 REMARK 500 7 TYR B 104 23.53 -145.92 REMARK 500 8 TYR A 4 37.45 -147.85 REMARK 500 8 TYR B 104 13.61 -140.18 REMARK 500 9 SER A 2 99.54 -41.85 REMARK 500 9 TYR B 104 -4.28 -142.55 REMARK 500 10 TYR A 4 18.13 -149.09 REMARK 500 12 ASP B 103 106.98 -52.27 REMARK 500 12 TYR B 104 4.00 -152.85 REMARK 500 13 SER A 2 65.56 -159.27 REMARK 500 14 SER A 2 126.77 -179.04 REMARK 500 14 SER B 102 132.79 -174.94 REMARK 500 15 ASP A 3 42.26 -67.26 REMARK 500 20 TYR A 4 16.97 -142.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 TYR A 4 0.11 SIDE_CHAIN REMARK 500 5 TYR A 4 0.07 SIDE_CHAIN REMARK 500 5 ARG A 34 0.09 SIDE_CHAIN REMARK 500 6 ARG A 41 0.08 SIDE_CHAIN REMARK 500 9 ARG A 34 0.11 SIDE_CHAIN REMARK 500 13 ARG B 118 0.09 SIDE_CHAIN REMARK 500 13 ARG B 134 0.08 SIDE_CHAIN REMARK 500 14 TYR A 4 0.07 SIDE_CHAIN REMARK 500 15 TYR B 104 0.09 SIDE_CHAIN REMARK 500 16 ARG A 34 0.09 SIDE_CHAIN REMARK 500 17 ARG A 34 0.11 SIDE_CHAIN REMARK 500 18 ARG B 118 0.10 SIDE_CHAIN REMARK 500 18 ARG B 141 0.08 SIDE_CHAIN REMARK 500 20 ARG A 34 0.08 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
DBREF 2JO8 A 3 51 UNP Q13043 STK4_HUMAN 432 480 DBREF 2JO8 B 103 151 UNP Q13043 STK4_HUMAN 432 480
SEQADV 2JO8 GLY A 1 UNP Q13043 CLONING ARTIFACT SEQADV 2JO8 SER A 2 UNP Q13043 CLONING ARTIFACT SEQADV 2JO8 GLY B 101 UNP Q13043 CLONING ARTIFACT SEQADV 2JO8 SER B 102 UNP Q13043 CLONING ARTIFACT
SEQRES 1 A 51 GLY SER ASP TYR GLU PHE LEU LYS SER TRP THR VAL GLU SEQRES 2 A 51 ASP LEU GLN LYS ARG LEU LEU ALA LEU ASP PRO MET MET SEQRES 3 A 51 GLU GLN GLU ILE GLU GLU ILE ARG GLN LYS TYR GLN SER SEQRES 4 A 51 LYS ARG GLN PRO ILE LEU ASP ALA ILE GLU ALA LYS SEQRES 1 B 51 GLY SER ASP TYR GLU PHE LEU LYS SER TRP THR VAL GLU SEQRES 2 B 51 ASP LEU GLN LYS ARG LEU LEU ALA LEU ASP PRO MET MET SEQRES 3 B 51 GLU GLN GLU ILE GLU GLU ILE ARG GLN LYS TYR GLN SER SEQRES 4 B 51 LYS ARG GLN PRO ILE LEU ASP ALA ILE GLU ALA LYS
HELIX 1 1 TYR A 4 TRP A 10 5 7 HELIX 2 2 THR A 11 GLU A 49 1 39 HELIX 3 3 GLU B 105 TRP B 110 5 6 HELIX 4 4 THR B 111 GLU B 149 1 39
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000