10 20 30 40 50 60 70 80 2JNT - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER LIGAND BINDING PROTEIN 02-FEB-07 2JNT
TITLE STRUCTURE OF BOMBYX MORI CHEMOSENSORY PROTEIN 1 IN SOLUTION
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHEMOSENSORY PROTEIN CSP1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 20-127; COMPND 5 SYNONYM: CHEMOSENSORY PROTEIN 4, HYPOTHETICAL PROTEIN; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOMBYX MORI; SOURCE 3 ORGANISM_COMMON: DOMESTIC SILKWORM; SOURCE 4 ORGANISM_TAXID: 7091; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET32A
KEYWDS BMORCSP1, CSP1, LIGAND BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR S.JANSEN,L.ZIDEK,J.CHMELIK,P.NOVAK,P.PADRTA,J.PICIMBON, AUTHOR 2 C.LOFSTEDT,V.SKLENAR
REVDAT 2 24-FEB-09 2JNT 1 VERSN REVDAT 1 20-NOV-07 2JNT 0
JRNL AUTH S.JANSEN,J.CHMELIK,L.ZIDEK,P.PADRTA,P.NOVAK, JRNL AUTH 2 Z.ZDRAHAL,J.-F.PICIMBON,C.LOFSTEDT,V.SKLENAR JRNL TITL STRUCTURE OF BOMBYX MORI CHEMOSENSORY PROTEIN 1 IN JRNL TITL 2 SOLUTION JRNL REF ARCH.INSECT BIOCHEM.PHYSIOL. V. 66 135 2007 JRNL REFN ISSN 0739-4462 JRNL PMID 17966128 JRNL DOI 10.1002/ARCH.20205
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 2.0A REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2JNT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-FEB-07. REMARK 100 THE RCSB ID CODE IS RCSB100065.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 1.0 MM [U-95% 13C, U-90% 15N] REMARK 210 CHEMOSENSORY PROTEIN 1, 20 MM REMARK 210 SODIUM PHOSPHATE, 0.05 MM REMARK 210 SODIUM AZIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 1H15N HSQC, HNCA, HN(CO)CA, REMARK 210 HNCACB, CBCA(CO)NH, HCCH REMARK 210 TOCSY, 13C15N EDITED NOESY, REMARK 210 HNCO, HCCH_TOCSY, 13C15N_ REMARK 210 EDITED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, SPARKY 3.110, ARIA REMARK 210 2.0A, MOLMOL, TALOS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 750 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 6 CYS A 26 CA - CB - SG ANGL. DEV. = 6.8 DEGREES REMARK 500 9 TYR A 23 CB - CG - CD1 ANGL. DEV. = 4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 2 32.21 -95.78 REMARK 500 1 TYR A 5 -51.89 55.31 REMARK 500 1 LYS A 7 -78.35 -158.41 REMARK 500 1 ILE A 8 41.24 -80.36 REMARK 500 1 LEU A 10 -64.40 -129.46 REMARK 500 1 LYS A 30 -72.12 -144.22 REMARK 500 1 GLU A 49 -101.98 -107.96 REMARK 500 1 CYS A 55 -103.49 -69.54 REMARK 500 1 ASN A 73 -55.91 -139.80 REMARK 500 1 GLU A 74 74.12 -103.53 REMARK 500 1 PHE A 85 -65.44 -91.91 REMARK 500 1 TRP A 91 31.28 -84.49 REMARK 500 2 THR A 2 81.13 166.05 REMARK 500 2 TYR A 5 19.39 54.45 REMARK 500 2 ASP A 6 -75.92 -104.18 REMARK 500 2 LYS A 7 -67.23 -163.84 REMARK 500 2 ILE A 8 44.22 -83.14 REMARK 500 2 LYS A 30 -71.35 -102.67 REMARK 500 2 GLU A 49 -94.09 -104.09 REMARK 500 2 LYS A 54 19.48 -67.20 REMARK 500 2 CYS A 55 -96.68 -80.29 REMARK 500 2 ASN A 73 -57.38 -136.41 REMARK 500 2 GLU A 74 51.57 -108.31 REMARK 500 2 ASP A 86 86.50 -151.37 REMARK 500 2 TRP A 91 -66.04 69.24 REMARK 500 3 ASP A 3 -44.60 72.23 REMARK 500 3 TYR A 5 -38.97 64.41 REMARK 500 3 LYS A 7 -102.31 -154.89 REMARK 500 3 ILE A 8 39.78 -92.32 REMARK 500 3 LYS A 30 -70.94 -107.54 REMARK 500 3 GLU A 49 -55.48 -142.30 REMARK 500 3 CYS A 55 -88.13 -59.57 REMARK 500 3 ASN A 73 -57.93 -142.18 REMARK 500 3 PHE A 85 -68.21 -97.80 REMARK 500 3 ASP A 86 88.23 -153.84 REMARK 500 3 LYS A 90 -72.98 -77.66 REMARK 500 3 TRP A 91 -59.86 60.47 REMARK 500 3 PRO A 107 107.46 -58.12 REMARK 500 4 LYS A 4 144.04 67.21 REMARK 500 4 TYR A 5 -57.52 56.84 REMARK 500 4 LYS A 7 -142.97 -131.60 REMARK 500 4 ILE A 8 40.52 -59.16 REMARK 500 4 LYS A 30 -75.96 -119.41 REMARK 500 4 TRP A 91 -73.74 65.55 REMARK 500 5 THR A 2 87.08 -150.64 REMARK 500 5 ASP A 3 -30.64 -133.87 REMARK 500 5 TYR A 5 24.86 49.44 REMARK 500 5 ASP A 6 -71.64 -110.34 REMARK 500 5 LYS A 7 -79.62 -166.61 REMARK 500 5 ILE A 8 39.99 -81.50 REMARK 500 5 LYS A 30 -72.88 -85.49 REMARK 500 5 GLU A 49 -88.40 -131.35 REMARK 500 5 CYS A 55 -106.55 -71.68 REMARK 500 5 GLU A 74 55.45 -101.25 REMARK 500 6 LYS A 4 129.05 68.09 REMARK 500 6 TYR A 5 -23.58 57.59 REMARK 500 6 LYS A 7 -84.35 -160.28 REMARK 500 6 ASN A 9 21.96 -145.70 REMARK 500 6 LYS A 30 -78.57 -149.65 REMARK 500 6 GLU A 49 -92.79 -132.34 REMARK 500 6 CYS A 52 92.93 -162.84 REMARK 500 6 CYS A 55 -99.95 -67.25 REMARK 500 6 GLU A 74 57.26 -109.63 REMARK 500 6 PHE A 85 -71.16 -105.08 REMARK 500 7 ASP A 3 125.63 173.98 REMARK 500 7 LYS A 4 160.87 65.64 REMARK 500 7 TYR A 5 -62.15 51.67 REMARK 500 7 LYS A 7 -157.50 -112.91 REMARK 500 7 ILE A 8 41.68 -69.97 REMARK 500 7 LYS A 30 -73.96 -94.48 REMARK 500 7 CYS A 52 61.23 -66.18 REMARK 500 7 CYS A 55 -139.59 -90.05 REMARK 500 7 ASN A 73 -56.76 -140.85 REMARK 500 7 GLU A 74 39.13 -98.12 REMARK 500 7 ASP A 86 95.73 -173.53 REMARK 500 7 TRP A 91 0.04 -65.78 REMARK 500 8 ASP A 3 94.53 79.84 REMARK 500 8 LYS A 4 131.07 88.70 REMARK 500 8 TYR A 5 -13.28 65.02 REMARK 500 8 LYS A 7 -67.09 -175.51 REMARK 500 8 ASN A 9 9.75 -158.23 REMARK 500 8 LYS A 30 -70.15 -91.72 REMARK 500 8 THR A 50 -46.46 171.76 REMARK 500 8 CYS A 55 -106.57 -75.16 REMARK 500 8 TRP A 91 -61.40 68.61 REMARK 500 9 TYR A 5 -37.33 67.72 REMARK 500 9 LYS A 7 -61.18 -167.56 REMARK 500 9 ILE A 8 42.40 -78.56 REMARK 500 9 LEU A 10 -64.91 -128.70 REMARK 500 9 LYS A 32 100.73 -162.21 REMARK 500 9 GLU A 49 -92.36 -90.70 REMARK 500 9 LYS A 54 20.01 -71.30 REMARK 500 9 CYS A 55 -109.83 -76.58 REMARK 500 9 ASN A 73 -57.76 -128.96 REMARK 500 9 GLU A 74 73.66 -112.23 REMARK 500 9 TRP A 91 -67.69 69.21 REMARK 500 10 ASP A 3 166.59 74.38 REMARK 500 10 LYS A 4 115.08 60.59 REMARK 500 10 TYR A 5 -40.89 63.99 REMARK 500 10 LYS A 7 -103.30 -159.61 REMARK 500 10 ILE A 8 40.86 -87.68 REMARK 500 10 LYS A 30 -76.52 -96.15 REMARK 500 10 GLU A 49 -54.44 -163.99 REMARK 500 10 CYS A 55 -126.44 -91.73 REMARK 500 10 ASN A 73 -58.51 -128.35 REMARK 500 10 PHE A 85 -82.22 -102.69 REMARK 500 10 LYS A 90 -73.35 -78.61 REMARK 500 10 TRP A 91 -61.64 57.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 2 ARG A 98 0.09 SIDE_CHAIN REMARK 500 8 ARG A 92 0.10 SIDE_CHAIN REMARK 500 9 ARG A 98 0.09 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6943 RELATED DB: BMRB REMARK 900 ENTRY CONTAINING RESONANCE ASSIGNMENT FOR THIS MOLECULAR REMARK 900 SYSTEM
DBREF 2JNT A 1 108 UNP Q8MMK7 Q8MMK7_BOMMO 20 127
SEQRES 1 A 108 TYR THR ASP LYS TYR ASP LYS ILE ASN LEU GLN GLU ILE SEQRES 2 A 108 LEU GLU ASN LYS ARG LEU LEU GLU SER TYR MET ASP CYS SEQRES 3 A 108 VAL LEU GLY LYS GLY LYS CYS THR PRO GLU GLY LYS GLU SEQRES 4 A 108 LEU LYS ASP HIS LEU GLN GLU ALA LEU GLU THR GLY CYS SEQRES 5 A 108 GLU LYS CYS THR GLU ALA GLN GLU LYS GLY ALA GLU THR SEQRES 6 A 108 SER ILE ASP TYR LEU ILE LYS ASN GLU LEU GLU ILE TRP SEQRES 7 A 108 LYS GLU LEU THR ALA HIS PHE ASP PRO ASP GLY LYS TRP SEQRES 8 A 108 ARG LYS LYS TYR GLU ASP ARG ALA LYS ALA LYS GLY ILE SEQRES 9 A 108 VAL ILE PRO GLU
HELIX 1 1 LEU A 10 GLU A 15 1 6 HELIX 2 2 ASN A 16 LEU A 28 1 13 HELIX 3 3 THR A 34 GLU A 49 1 16 HELIX 4 4 THR A 56 ASN A 73 1 18 HELIX 5 5 GLU A 74 ASP A 86 1 13 HELIX 6 6 TRP A 91 GLY A 103 1 13
SSBOND 1 CYS A 26 CYS A 33 1555 1555 2.01 SSBOND 2 CYS A 52 CYS A 55 1555 1555 2.02
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000