10 20 30 40 50 60 70 80 2JNF - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER METAL BINDING PROTEIN 18-JAN-07 2JNF
TITLE SOLUTION STRUCTURE OF FLY TROPONIN C, ISOFORM F1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TROPONIN C; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LETHOCERUS INDICUS; SOURCE 3 ORGANISM_TAXID: 212017; SOURCE 4 GENE: TNC4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PETM-11
KEYWDS STRETCH ACTIVATED MUSCLE CONTRACTION, TROPONIN C, EF-HAND, KEYWDS 2 LETHOCERUS INDICUS, METAL BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR G.F.DE NICOLA,B.BULLARD,A.PASTORE
REVDAT 2 24-FEB-09 2JNF 1 VERSN REVDAT 1 07-AUG-07 2JNF 0
JRNL AUTH G.DE NICOLA,C.BURKART,F.QIU,B.AGIANIAN,S.LABEIT, JRNL AUTH 2 S.MARTIN,B.BULLARD,A.PASTORE JRNL TITL THE STRUCTURE OF LETHOCERUS TROPONIN C: INSIGHTS JRNL TITL 2 INTO THE MECHANISM OF STRETCH ACTIVATION IN MUSCLES JRNL REF STRUCTURE V. 15 813 2007 JRNL REFN ISSN 0969-2126 JRNL PMID 17637342 JRNL DOI 10.1016/J.STR.2007.05.007
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.2 REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: WATER REFINEMENT
REMARK 4 REMARK 4 2JNF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JAN-07. REMARK 100 THE RCSB ID CODE IS RCSB100051.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 100 MM NACL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.7 MM [U-99% 15N] MUSCLE REMARK 210 PROTEIN, 90% H2O, 10% D2O; 0.7 REMARK 210 MM [U-99% 13C; U-99% 15N] REMARK 210 MUSCLE PROTEIN, 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC, 2D 1H-13C REMARK 210 HSQC, 3D 1H-15N NOESY, 3D 1H- REMARK 210 13C NOESY, 3D HN(COCA)CB, 3D REMARK 210 HNCA, 3D HNCACB, 3D CBCA(CO) REMARK 210 NH, 3D HNCO, 3D 1H-15N TOCSY, REMARK 210 3D HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 600 MHZ, 800 MHZ REMARK 210 SPECTROMETER MODEL : UNITY, INOVA, AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN, BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR, XWINNMR, NMRPIPE, ARIA REMARK 210 1.2, XEASY REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 3 -178.29 64.17 REMARK 500 1 THR A 24 138.10 75.05 REMARK 500 1 GLU A 26 25.08 -156.02 REMARK 500 1 ILE A 45 -83.41 -113.35 REMARK 500 1 THR A 48 -179.46 -62.81 REMARK 500 1 LEU A 80 -76.38 -48.65 REMARK 500 1 GLU A 122 23.00 -76.02 REMARK 500 1 ASP A 137 93.78 -68.22 REMARK 500 1 ASP A 145 -73.26 -144.17 REMARK 500 1 PHE A 146 -97.17 -79.28 REMARK 500 2 SER A 8 44.75 -85.54 REMARK 500 2 SER A 9 -41.83 71.45 REMARK 500 2 THR A 24 131.78 79.75 REMARK 500 2 GLU A 26 32.10 -165.52 REMARK 500 2 ILE A 45 -77.30 -116.12 REMARK 500 2 THR A 48 176.97 -56.89 REMARK 500 2 GLU A 83 105.85 -58.22 REMARK 500 2 VAL A 84 89.92 -68.18 REMARK 500 2 GLN A 90 -70.66 -95.07 REMARK 500 2 GLN A 91 48.57 38.98 REMARK 500 2 ASP A 101 86.53 -64.57 REMARK 500 2 ASP A 137 93.87 -69.76 REMARK 500 2 ASP A 145 -55.58 -145.59 REMARK 500 2 PHE A 146 -97.14 -105.55 REMARK 500 3 ASP A 3 78.66 -104.08 REMARK 500 3 THR A 24 130.86 86.24 REMARK 500 3 GLU A 26 33.69 -159.91 REMARK 500 3 ILE A 45 -84.80 -116.17 REMARK 500 3 THR A 48 170.87 -54.94 REMARK 500 3 VAL A 84 72.85 -117.55 REMARK 500 3 GLN A 88 -55.54 -124.49 REMARK 500 3 GLN A 90 -166.22 -127.00 REMARK 500 3 GLN A 91 48.95 38.68 REMARK 500 3 ASP A 101 82.68 -69.30 REMARK 500 3 ASP A 145 -78.78 -145.53 REMARK 500 3 PHE A 146 -86.31 -76.74 REMARK 500 4 SER A 9 -33.41 69.09 REMARK 500 4 THR A 24 133.64 78.80 REMARK 500 4 ILE A 45 -73.28 -119.60 REMARK 500 4 GLU A 83 99.06 23.96 REMARK 500 4 GLN A 90 -163.69 -117.42 REMARK 500 4 ASP A 145 -42.98 -153.91 REMARK 500 4 PHE A 146 -93.07 -96.63 REMARK 500 4 THR A 154 41.42 -94.41 REMARK 500 5 THR A 24 127.15 80.25 REMARK 500 5 GLU A 26 24.69 -142.77 REMARK 500 5 ILE A 45 -61.36 -109.74 REMARK 500 5 LEU A 80 -73.64 -53.67 REMARK 500 5 GLN A 90 -78.39 -129.31 REMARK 500 5 ASP A 145 -61.53 -139.12 REMARK 500 5 PHE A 146 -112.74 -94.84 REMARK 500 5 VAL A 152 -71.82 -91.31 REMARK 500 6 ASP A 3 63.73 -68.35 REMARK 500 6 SER A 8 47.67 -83.07 REMARK 500 6 SER A 9 -35.64 70.28 REMARK 500 6 THR A 24 140.88 78.80 REMARK 500 6 GLU A 26 47.59 -178.07 REMARK 500 6 ILE A 45 -76.85 -118.76 REMARK 500 6 GLU A 82 50.41 -92.19 REMARK 500 6 GLU A 83 97.69 -67.98 REMARK 500 6 GLU A 87 -84.04 -90.94 REMARK 500 6 GLN A 90 -70.42 -87.04 REMARK 500 6 ASP A 145 -77.63 -157.20 REMARK 500 6 GLU A 147 -54.44 64.86 REMARK 500 7 ASP A 3 89.09 -37.66 REMARK 500 7 SER A 9 -42.07 71.54 REMARK 500 7 THR A 24 137.77 76.01 REMARK 500 7 GLN A 46 -166.67 50.29 REMARK 500 7 GLU A 82 16.47 54.70 REMARK 500 7 GLN A 88 -50.14 66.81 REMARK 500 7 ASP A 137 95.93 -69.73 REMARK 500 7 ASP A 145 -69.16 -146.37 REMARK 500 8 SER A 9 -54.19 65.15 REMARK 500 8 THR A 24 138.52 77.81 REMARK 500 8 GLU A 26 47.03 -164.30 REMARK 500 8 ILE A 45 -86.09 -110.96 REMARK 500 8 GLN A 91 47.19 -81.21 REMARK 500 8 ASP A 145 -68.99 -150.43 REMARK 500 8 PHE A 146 -88.28 -85.23 REMARK 500 8 ASP A 157 -73.98 -112.38 REMARK 500 9 THR A 24 144.69 76.27 REMARK 500 9 GLU A 26 -39.61 -136.50 REMARK 500 9 GLN A 46 -171.37 50.62 REMARK 500 9 GLU A 83 -72.12 -60.00 REMARK 500 9 VAL A 84 58.70 37.41 REMARK 500 9 GLN A 88 19.46 59.53 REMARK 500 9 MET A 89 80.84 -172.25 REMARK 500 9 GLN A 90 -78.83 -77.62 REMARK 500 9 ASP A 145 -72.20 -139.46 REMARK 500 9 PHE A 146 -98.46 -82.99 REMARK 500 10 THR A 24 133.91 76.08 REMARK 500 10 GLU A 26 46.50 -163.84 REMARK 500 10 ILE A 45 -83.88 -119.06 REMARK 500 10 ASP A 137 94.71 -66.18 REMARK 500 10 ASP A 145 -64.21 -146.43 REMARK 500 10 PHE A 146 -97.98 -94.12 REMARK 500 REMARK 500 REMARK: NULL
DBREF 2JNF A 1 158 UNP Q868D4 Q868D4_9HEMI 1 158
SEQRES 1 A 158 MET GLY ASP VAL SER LYS LEU SER SER ASN GLN VAL LYS SEQRES 2 A 158 LEU LEU GLU THR ALA PHE ARG ASP PHE GLU THR PRO GLU SEQRES 3 A 158 GLY SER GLY ARG VAL SER THR ASP GLN ILE GLY ILE ILE SEQRES 4 A 158 LEU GLU VAL LEU GLY ILE GLN GLN THR LYS SER THR ILE SEQRES 5 A 158 ARG GLN LEU ILE ASP GLU PHE ASP PRO PHE GLY ASN GLY SEQRES 6 A 158 ASP ILE ASP PHE ASP SER PHE LYS ILE ILE GLY ALA ARG SEQRES 7 A 158 PHE LEU GLY GLU GLU VAL ASN PRO GLU GLN MET GLN GLN SEQRES 8 A 158 GLU LEU ARG GLU ALA PHE ARG LEU TYR ASP LYS GLU GLY SEQRES 9 A 158 ASN GLY TYR ILE SER THR ASP VAL MET ARG GLU ILE LEU SEQRES 10 A 158 ALA GLU LEU ASP GLU THR LEU SER SER GLU ASP LEU ASP SEQRES 11 A 158 ALA MET ILE ASP GLU ILE ASP ALA ASP GLY SER GLY THR SEQRES 12 A 158 VAL ASP PHE GLU GLU PHE MET GLY VAL MET THR GLY GLY SEQRES 13 A 158 ASP GLU
HELIX 1 1 SER A 8 PHE A 22 1 15 HELIX 2 2 THR A 33 LEU A 43 1 11 HELIX 3 3 THR A 48 ASP A 60 1 13 HELIX 4 4 ASP A 68 LEU A 80 1 13 HELIX 5 5 GLU A 92 ASP A 101 1 10 HELIX 6 6 THR A 110 ASP A 121 1 12 HELIX 7 7 SER A 125 ASP A 137 1 13 HELIX 8 8 PHE A 146 MET A 153 1 8
SHEET 1 A 2 VAL A 31 SER A 32 0 SHEET 2 A 2 ASP A 66 ILE A 67 -1 O ILE A 67 N VAL A 31 SHEET 1 B 2 ILE A 108 SER A 109 0 SHEET 2 B 2 THR A 143 VAL A 144 -1 O VAL A 144 N ILE A 108
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000