10 20 30 40 50 60 70 80 2JMK - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PROTEIN BINDING 20-NOV-06 2JMK
TITLE SOLUTION STRUCTURE OF TA0956
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN TA0956; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOPLASMA ACIDOPHILUM; SOURCE 3 ORGANISM_TAXID: 2303; SOURCE 4 GENE: TA0956; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B
KEYWDS HYPOTHETICAL PROTEIN, PROTEIN BINDING
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR B.KOO,J.JUNG,H.JUNG,H.NAM,Y.KIM,A.YEE,C.H.ARROWSMITH,W.LEE
REVDAT 2 24-FEB-09 2JMK 1 VERSN REVDAT 1 02-OCT-07 2JMK 0
JRNL AUTH B.K.KOO,J.JUNG,H.JUNG,H.W.NAM,Y.S.KIM,A.YEE,W.LEE JRNL TITL SOLUTION STRUCTURE OF THE HYPOTHETICAL NOVEL-FOLD JRNL TITL 2 PROTEIN TA0956 FROM THERMOPLASMA ACIDOPHILUM JRNL REF PROTEINS V. 69 444 2007 JRNL REFN ISSN 0887-3585 JRNL PMID 17634985 JRNL DOI 10.1002/PROT.21490
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2JMK COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-NOV-06. REMARK 100 THE RCSB ID CODE IS RCSB100020.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 373.15 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.5 MM [U-98% 13C, U-98% 15N] REMARK 210 TA0956, 20 MM SODIUM REMARK 210 PHOSPHATE, 100 MM SODIUM REMARK 210 CHLORIDE, 5 MM DTT, 0.01 W/V REMARK 210 SODIUM AZIDE, 0.01 W/V DSS, REMARK 210 90% H2O/10% D2O; 1.5 MM [U-98% REMARK 210 13C, U-98% 15N] TA0956, 20 MM REMARK 210 SODIUM PHOSPHATE, 100 MM REMARK 210 SODIUM CHLORIDE, 5 MM DTT, REMARK 210 0.01 W/V SODIUM AZIDE, 0.01 W/ REMARK 210 V DSS, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY, 2D 1H-15N REMARK 210 HSQC, 2D 1H-13C HSQC, 3D REMARK 210 CBCA(CO)NH, 3D HNCACB, 3D REMARK 210 HNCO, 3D HCCH-TOCSY, 3D 1H-13C REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX, AMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, XWINNMR, SPARKY REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 0
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 11 173.62 -54.36 REMARK 500 1 ALA A 12 101.44 -54.11 REMARK 500 1 HIS A 15 160.66 62.52 REMARK 500 1 SER A 82 -169.97 -125.19 REMARK 500 1 LYS A 105 92.70 -64.18 REMARK 500 2 ASP A 56 -65.31 -98.53 REMARK 500 3 ALA A 53 98.25 -66.57 REMARK 500 3 ASP A 83 91.69 -65.73 REMARK 500 4 ALA A 12 109.86 -51.67 REMARK 500 4 ASP A 56 -66.98 -102.53 REMARK 500 5 ASN A 40 50.44 -104.63 REMARK 500 5 ASP A 83 106.75 -53.78 REMARK 500 6 SER A 14 -79.13 -126.96 REMARK 500 6 HIS A 15 156.32 177.22 REMARK 500 6 ASN A 40 48.66 -102.81 REMARK 500 6 MET A 59 71.53 -118.60 REMARK 500 6 GLU A 61 19.31 -150.54 REMARK 500 6 ASP A 83 63.19 61.49 REMARK 500 7 ASP A 56 -169.26 -119.29 REMARK 500 7 GLU A 57 88.22 -67.29 REMARK 500 8 ALA A 12 108.43 -51.61 REMARK 500 8 GLU A 57 40.29 -94.08 REMARK 500 8 ASP A 83 79.03 63.32 REMARK 500 8 LYS A 105 86.23 -68.77 REMARK 500 9 ASN A 40 52.00 -92.32 REMARK 500 9 GLU A 57 73.09 60.48 REMARK 500 9 LYS A 75 54.84 39.75 REMARK 500 9 SER A 82 -169.41 -73.73 REMARK 500 9 ASP A 83 103.43 -51.55 REMARK 500 10 MET A 11 173.98 -54.53 REMARK 500 10 MET A 59 66.94 -161.53 REMARK 500 10 LYS A 75 55.23 38.60 REMARK 500 10 ASP A 83 61.71 63.34 REMARK 500 11 ASP A 41 103.68 -51.05 REMARK 500 11 GLU A 57 109.48 -51.29 REMARK 500 11 MET A 59 70.75 -115.15 REMARK 500 11 GLU A 61 21.56 -154.76 REMARK 500 11 SER A 82 170.58 -54.93 REMARK 500 11 ASP A 83 107.70 -55.00 REMARK 500 12 ALA A 12 107.73 -51.63 REMARK 500 12 THR A 55 -62.74 -135.68 REMARK 500 12 ASP A 83 86.02 62.83 REMARK 500 13 ALA A 12 101.66 -54.09 REMARK 500 13 HIS A 15 160.42 63.03 REMARK 500 13 GLU A 61 32.60 -96.02 REMARK 500 13 LYS A 75 47.97 38.71 REMARK 500 14 MET A 59 67.03 -162.84 REMARK 500 14 ASP A 83 64.46 62.32 REMARK 500 15 MET A 11 171.85 -53.15 REMARK 500 15 SER A 14 17.47 -141.66 REMARK 500 15 HIS A 15 160.72 62.81 REMARK 500 15 LYS A 75 44.18 37.82 REMARK 500 15 ASP A 83 89.05 -68.52 REMARK 500 16 ASN A 40 46.35 -108.10 REMARK 500 17 ALA A 12 103.45 -51.15 REMARK 500 17 HIS A 15 160.81 62.38 REMARK 500 17 ASP A 83 107.08 -52.70 REMARK 500 18 MET A 11 174.96 -56.78 REMARK 500 18 ALA A 12 102.67 -52.87 REMARK 500 18 HIS A 15 160.75 62.44 REMARK 500 18 ASP A 38 31.75 -95.69 REMARK 500 18 GLU A 57 38.49 -99.75 REMARK 500 18 MET A 59 -61.11 -179.37 REMARK 500 18 ASP A 62 176.84 -56.33 REMARK 500 18 LYS A 75 60.15 61.37 REMARK 500 18 ASP A 83 60.96 62.71 REMARK 500 19 SER A 14 38.79 -94.77 REMARK 500 19 HIS A 15 153.65 64.48 REMARK 500 19 PRO A 16 98.15 -69.69 REMARK 500 19 ASP A 41 99.08 -66.17 REMARK 500 19 GLU A 61 34.86 -96.10 REMARK 500 19 ASP A 83 90.24 -66.68 REMARK 500 20 ALA A 12 106.13 -52.02 REMARK 500 20 GLU A 39 81.11 69.73 REMARK 500 20 ASP A 41 155.13 -46.17 REMARK 500 20 ASP A 83 107.12 -55.86 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15039 RELATED DB: BMRB
DBREF 2JMK A 1 110 UNP Q9HJL1 Q9HJL1_THEAC 1 110
SEQADV 2JMK GLY A 0 UNP Q9HJL1 EXPRESSION TAG
SEQRES 1 A 111 GLY MET THR LEU CYS ALA MET TYR ASN ILE SER MET ALA SEQRES 2 A 111 GLY SER HIS PRO THR THR ILE CYS VAL VAL MET ASP ARG SEQRES 3 A 111 PHE LEU GLU SER PHE SER GLU LEU TYR ASP ILE ILE ASP SEQRES 4 A 111 GLU ASN ASP THR ASP VAL MET MET ASP PHE ILE SER ARG SEQRES 5 A 111 PHE ALA ARG THR ASP GLU ILE MET PRO GLU ASP LYS THR SEQRES 6 A 111 VAL GLY PHE VAL VAL VAL ASN ALA ASP LYS LYS LEU MET SEQRES 7 A 111 SER VAL SER PHE SER ASP ILE ASP GLU ASN MET LYS LYS SEQRES 8 A 111 VAL ILE LYS ALA THR ALA GLU LYS PHE LYS ASN LYS GLY SEQRES 9 A 111 PHE LYS VAL GLU THR ASP MET
HELIX 1 1 ARG A 25 ILE A 37 1 13 HELIX 2 2 ASP A 43 ALA A 53 1 11 HELIX 3 3 ASN A 87 PHE A 99 1 13 HELIX 4 4 LYS A 100 GLY A 103 5 4
SHEET 1 A 5 THR A 17 VAL A 22 0 SHEET 2 A 5 LEU A 3 SER A 10 -1 N TYR A 7 O ILE A 19 SHEET 3 A 5 LYS A 63 ASN A 71 1 O LYS A 63 N CYS A 4 SHEET 4 A 5 LEU A 76 PHE A 81 -1 O SER A 80 N PHE A 67 SHEET 5 A 5 LYS A 105 THR A 108 1 O GLU A 107 N VAL A 79
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000